# locus_id locus_tag location classification internal_stop indel ref_id description query_cov ref_cov identity MGA_68 LOCUS_00680 sequence1:87264..87491(+) frameshift,internal_stop_codon 87222..87224(+) 87482,87037 WP_002352368.1 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 77.3 20.6 65.5 MGA_107 LOCUS_01070 sequence1:124927..125610(+) frameshift 124864 WP_008090262.1 class C sortase 99.6 79.9 81.4 MGA_110 LOCUS_01100 sequence1:128292..128687(-) frameshift 128797 WP_004454990.1 LysR family transcriptional regulator 80.9 35.3 34.9 MGA_111 LOCUS_01110 sequence1:128783..129202(-) frameshift 128797 WP_004454990.1 LysR family transcriptional regulator 97.8 45.3 51.5 MGA_133 LOCUS_01330 sequence1:151451..151807(+) internal_stop_codon 151391..151393(+) WP_003058235.1 NAD glycohydrolase inhibitor 100.0 73.3 96.6 MGA_134 LOCUS_01340 sequence1:151822..152178(+) frameshift 152124 WP_010921831.1 cholesterol-dependent cytolysin streptolysin O 87.3 18.0 83.5 MGA_135 LOCUS_01350 sequence1:152454..153545(+) partial WP_010921831.1 cholesterol-dependent cytolysin streptolysin O 100.0 63.6 98.9 MGA_159 LOCUS_01590 sequence1:178575..178790(-) internal_stop_codon 178830..178832(-),178944..178946(-) WP_143249001.1 IS3 family transposase 95.8 49.6 80.9 MGA_160 LOCUS_01600 sequence1:179103..179399(-) frameshift,internal_stop_codon 178943..178945(-),178829..178831(-),179102..179104(-) 179473 WP_100190746.1 IS3 family transposase 95.9 24.6 61.7 MGA_162 LOCUS_01620 sequence1:179803..180267(-) partial WP_010921847.1 SLC13 family permease 100.0 35.3 94.8 MGA_164 LOCUS_01640 sequence1:182509..183315(-) frameshift 183401 WP_172450158.1 IS3 family transposase 100.0 60.0 96.6 MGA_165 LOCUS_01650 sequence1:183336..183851(-) frameshift 183407 WP_172450158.1 IS3 family transposase 94.2 36.0 93.2 MGA_237 LOCUS_02370 sequence1:271241..271945(+) frameshift 271939 WP_010921895.1 ISAs1-like element IS1548 family transposase 99.6 61.8 100.0 MGA_238 LOCUS_02380 sequence1:271956..272363(+) frameshift 271936 WP_000564846.1 ISAs1-like element IS1548 family transposase 100.0 35.8 99.3 MGA_261 LOCUS_02610 sequence1:292908..293864(+) frameshift 293861 WP_002991036.1 two-component system sensor histidine kinase CovS 100.0 63.6 99.1 MGA_262 LOCUS_02620 sequence1:293869..294411(+) frameshift 293861 WP_002991036.1 two-component system sensor histidine kinase CovS 100.0 36.0 100.0 MGA_275 LOCUS_02750 sequence1:308903..309310(-) frameshift 309329 WP_000564846.1 ISAs1-like element IS1548 family transposase 100.0 35.8 99.3 MGA_276 LOCUS_02760 sequence1:309321..310025(-) frameshift 309326 WP_000564846.1 ISAs1-like element IS1548 family transposase 99.6 61.8 100.0 MGA_366 LOCUS_03660 sequence1:392694..392828(-) frameshift 392832 WP_000191691.1 IS256-like element ISSag11 family transposase 100.0 11.3 72.7 MGA_367 LOCUS_03670 sequence1:392958..393380(-) frameshift 392832 WP_000191691.1 IS256-like element ISSag11 family transposase 91.4 32.7 86.7 MGA_380 LOCUS_03800 sequence1:403933..404169(+) partial WP_002985700.1 preprotein translocase subunit SecG 74.4 74.4 87.9 MGA_396 LOCUS_03960 sequence1:420822..421997(+) partial WP_010921986.1 ABC-2 family transporter protein 51.7 73.9 98.0 MGA_417 LOCUS_04170 sequence1:445338..446183(-) internal_stop_codon 446268..446270(-) WP_012560534.1 DUF2326 domain-containing protein 100.0 50.9 95.7 MGA_418 LOCUS_04180 sequence1:446268..446996(-) internal_stop_codon 446268..446270(-) WP_012560534.1 DUF2326 domain-containing protein 100.0 43.8 97.5 MGA_420 LOCUS_04200 sequence1:447211..447870(-) partial WP_014635352.1 hypothetical protein 100.0 74.5 95.0 MGA_425 LOCUS_04250 sequence1:449354..449806(+) partial WP_000523689.1 phage portal protein 90.7 31.2 87.1 MGA_426 LOCUS_04260 sequence1:449872..450186(+) partial WP_006738705.1 phage tail spike protein 73.1 7.6 86.8 MGA_427 LOCUS_04270 sequence1:450603..450941(+) partial WP_008088279.1 Fic family protein 91.1 31.1 99.0 MGA_430 LOCUS_04300 sequence1:453278..453994(+) partial WP_000926333.1 LD-carboxypeptidase 98.7 71.5 44.8 MGA_433 LOCUS_04330 sequence1:455679..456320(-) frameshift,internal_stop_codon 455596..455598(-) 456481,455701 WP_088197835.1 IS3-like element ISSag5 family transposase 96.7 54.1 95.1 MGA_434 LOCUS_04340 sequence1:456440..456760(-) frameshift 456472 WP_165992825.1 IS3 family transposase 85.8 23.9 87.9 MGA_492 LOCUS_04920 sequence1:519962..520576(+) internal_stop_codon 520574..520576(+) WP_000048144.1 (S)-acetoin forming diacetyl reductase 100.0 80.3 99.0 MGA_493 LOCUS_04930 sequence1:520580..520726(+) internal_stop_codon 520574..520576(+) WP_000048144.1 (S)-acetoin forming diacetyl reductase 100.0 18.9 97.9 MGA_506 LOCUS_05060 sequence1:533758..534519(+) partial WP_010922203.1 phage antirepressor KilAC domain-containing protein 68.4 70.2 74.6 MGA_542 LOCUS_05420 sequence1:550336..551001(+) partial WP_011475651.1 Clp protease ClpP 76.9 72.0 43.4 MGA_543 LOCUS_05430 sequence1:551025..552209(+) partial WP_010905714.1 phage major capsid protein 78.7 72.5 42.0 MGA_551 LOCUS_05510 sequence1:555010..558933(+) partial WP_011475661.1 tape measure protein 67.9 72.7 22.3 MGA_582 LOCUS_05810 sequence1:588443..589033(-) frameshift,internal_stop_codon 589097..589099(-) 589072,588459,589183 WP_164925488.1 IS110 family transposase 99.0 45.1 79.4 MGA_583 LOCUS_05820 sequence1:589082..589333(-) frameshift,internal_stop_codon 589096..589098(-) 589182,589350,589071 WP_162038636.1 IS110 family transposase 61.4 11.6 82.4 MGA_585 LOCUS_05840 sequence1:590348..591235(-) frameshift 590374 WP_010921809.1 transcriptional regulator RofA 96.9 57.3 32.3 MGA_621 LOCUS_06200 sequence1:639477..639653(+) partial WP_000048058.1 30S ribosomal protein S21 74.1 74.1 100.0 MGA_687 LOCUS_06860 sequence1:709915..710133(-) frameshift,internal_stop_codon 710209..710211(-),710206..710208(-) 710233 WP_128834060.1 IS3-like element ISSmu1 family transposase 100.0 16.0 81.9 MGA_688 LOCUS_06870 sequence1:710430..710639(-) frameshift 710716 WP_010921949.1 streptococcal pyrogenic exotoxin SpeJ 100.0 29.7 71.0 MGA_797 LOCUS_07960 sequence1:825863..826609(+) partial WP_025188680.1 DnaD domain protein 44.0 43.4 56.9 MGA_799 LOCUS_07980 sequence1:827431..827661(+) partial WP_000220553.1 hypothetical protein 94.7 56.7 38.2 MGA_802 LOCUS_08010 sequence1:828311..828616(+) partial WP_000793494.1 DUF1372 family protein 62.4 57.8 77.8 MGA_819 LOCUS_08180 sequence1:836874..837680(+) partial WP_013096330.1 Clp protease ClpP 67.2 28.7 32.8 MGA_844 LOCUS_08430 sequence1:856973..857170(+) frameshift,internal_stop_codon 857229..857231(+) 857209,857134 WP_000438314.1 nucleoside-diphosphate kinase 75.4 34.8 55.1 MGA_856 LOCUS_08550 sequence1:868675..869022(+) frameshift,internal_stop_codon 869020..869022(+) 869106 WP_003058426.1 YkgJ family cysteine cluster protein 100.0 68.5 93.0 MGA_866 LOCUS_08650 sequence1:879576..879944(+) frameshift,internal_stop_codon 879945..879947(+) 879428,879557,879374 WP_105158881.1 replication initiator protein A 100.0 44.1 66.4 MGA_867 LOCUS_08660 sequence1:880119..880442(+) partial WP_074485044.1 DNA (cytosine-5-)-methyltransferase 70.1 16.6 94.7 MGA_868 LOCUS_08670 sequence1:880758..880967(+) frameshift,internal_stop_codon 880710..880712(+),880620..880622(+) 881048,881120,880958 WP_168549381.1 SAG1250 family conjugative relaxase 98.6 11.0 91.2 MGA_869 LOCUS_08680 sequence1:881232..881927(+) frameshift,internal_stop_codon 881097..881099(+) 880961,881114 WP_093958851.1 SAG1250 family conjugative relaxase 99.6 36.2 68.3 MGA_878 LOCUS_08770 sequence1:888275..888406(+) internal_stop_codon 888647..888649(+),888404..888406(+) WP_000201988.1 site-specific integrase 100.0 10.8 81.4 MGA_879 LOCUS_08780 sequence1:888428..888649(+) internal_stop_codon 888647..888649(+),888941..888943(+),888404..888406(+) WP_012775621.1 site-specific integrase 98.6 18.0 77.8 MGA_880 LOCUS_08790 sequence1:888722..888943(+) internal_stop_codon 888647..888649(+),888941..888943(+) WP_000201988.1 site-specific integrase 100.0 18.3 87.7 MGA_881 LOCUS_08800 sequence1:888974..889357(+) internal_stop_codon 889355..889357(+),888941..888943(+) WP_000201988.1 site-specific integrase 100.0 31.8 86.6 MGA_914 LOCUS_09130 sequence1:920595..921212(+) frameshift 921146 WP_009854121.1 SDR family oxidoreductase 94.1 78.5 74.1 MGA_947 LOCUS_09460 sequence1:954481..954963(-) frameshift,internal_stop_codon 954969..954971(-),955204..955206(-) 955240,955173,955094 WP_000354840.1 LysR family transcriptional regulator 100.0 54.4 77.5 MGA_948 LOCUS_09470 sequence1:955376..955921(+) partial WP_001286427.1 PTS sugar transporter subunit IIC 100.0 53.4 84.6 MGA_1054 LOCUS_10530 sequence1:1063910..1064512(-) partial WP_000227060.1 hypothetical protein 53.5 67.7 44.4 MGA_1055 LOCUS_10540 sequence1:1064524..1065288(-) partial WP_010922095.1 glucosaminidase domain-containing protein 96.9 58.8 45.7 MGA_1060 LOCUS_10590 sequence1:1066453..1068315(-) partial WP_000536253.1 DUF859 family phage minor structural protein 76.6 71.1 35.3 MGA_1061 LOCUS_10600 sequence1:1068320..1071760(-) partial WP_000955548.1 glucosaminidase domain-containing protein 82.5 72.2 43.4 MGA_1063 LOCUS_10620 sequence1:1073246..1075051(-) partial WP_000224695.1 hypothetical protein 66.9 57.2 37.3 MGA_1099 LOCUS_10980 sequence1:1092559..1092873(-) partial WP_001080846.1 helix-turn-helix transcriptional regulator 92.3 67.4 49.0 MGA_1105 LOCUS_11040 sequence1:1094630..1094830(-) partial WP_012258019.1 cupin domain-containing protein 92.4 28.4 47.5 MGA_1133 LOCUS_11320 sequence1:1125146..1125289(-) partial WP_002894209.1 teichoic acid D-Ala incorporation-associated protein DltX 72.3 79.1 58.8 MGA_1148 LOCUS_11470 sequence1:1141118..1141633(+) frameshift 1141561 WP_172450158.1 IS3 family transposase 94.2 36.0 93.2 MGA_1149 LOCUS_11480 sequence1:1141654..1142460(+) frameshift 1141567 WP_172450158.1 IS3 family transposase 100.0 60.0 95.1 MGA_1155 LOCUS_11540 sequence1:1147511..1148023(-) frameshift,internal_stop_codon 1148212..1148214(-) 1148223 WP_164227857.1 nucleoside phosphorylase 100.0 64.4 86.5 MGA_1184 LOCUS_11830 sequence1:1181443..1181739(+) frameshift,internal_stop_codon 1182011..1182013(+),1181897..1181899(+),1181738..1181740(+) 1181368 WP_100190746.1 IS3 family transposase 95.9 24.6 61.7 MGA_1185 LOCUS_11840 sequence1:1182052..1182273(+) internal_stop_codon 1182010..1182012(+),1181896..1181898(+) WP_143249001.1 IS3 family transposase 90.4 48.2 83.3 MGA_1216 LOCUS_12150 sequence1:1216098..1216289(-) partial WP_000934666.1 penicillin-binding protein PBP2B 85.7 7.6 53.7 MGA_1224 LOCUS_12230 sequence1:1223646..1223828(-) partial WP_000965642.1 hypothetical protein 61.7 62.7 75.7 MGA_1341 LOCUS_13400 sequence1:1323698..1325557(-) frameshift 1325631 WP_010922513.1 CRISPR-associated helicase/endonuclease Cas3 100.0 77.2 99.2 MGA_1342 LOCUS_13410 sequence1:1325599..1326105(-) frameshift 1325628 WP_010922513.1 CRISPR-associated helicase/endonuclease Cas3 94.6 19.8 100.0 MGA_1345 LOCUS_13440 sequence1:1329469..1329648(-) partial WP_003055970.1 GNAT family protein 100.0 30.1 91.5 MGA_1399 LOCUS_13980 sequence1:1386639..1386854(-) internal_stop_codon 1386873..1386875(-) WP_010922072.1 DNA modification methylase 100.0 18.3 100.0 MGA_1400 LOCUS_13990 sequence1:1386873..1387805(-) internal_stop_codon 1386873..1386875(-) WP_010922072.1 DNA modification methylase 100.0 79.9 95.2 MGA_1419 LOCUS_14180 sequence1:1395465..1396226(-) partial WP_001181101.1 replication initiator protein A 45.8 35.5 38.5 MGA_1447 LOCUS_14460 sequence1:1427439..1427756(-) partial WP_002983650.1 DNA-directed RNA polymerase subunit omega 68.6 68.6 100.0 MGA_1488 LOCUS_14870 sequence1:1472754..1473314(-) frameshift 1473351 WP_002983556.1 glycerol kinase GlpK 100.0 36.6 97.3 MGA_1489 LOCUS_14880 sequence1:1473316..1474281(-) frameshift 1473348 WP_002983556.1 glycerol kinase GlpK 96.9 61.2 100.0 MGA_1504 LOCUS_15030 sequence1:1489280..1489543(-) frameshift 1489545,1489305 WP_002468897.1 tagatose-6-phosphate kinase 88.5 24.8 53.2 MGA_1514 LOCUS_15130 sequence1:1497082..1497243(-) frameshift 1497093 WP_010922579.1 CopY/TcrY family copper transport repressor 100.0 36.8 98.1 MGA_1563 LOCUS_15620 sequence1:1541901..1542125(-) frameshift 1542099 WP_000448266.1 pyruvate, phosphate dikinase 94.6 7.9 64.3 MGA_1586 LOCUS_15850 sequence1:1573507..1573965(-) frameshift 1573933 WP_010921895.1 ISAs1-like element IS1548 family transposase 93.4 37.7 99.3 MGA_1587 LOCUS_15860 sequence1:1573925..1574629(-) frameshift 1573930 WP_000564846.1 ISAs1-like element IS1548 family transposase 99.6 61.8 100.0 MGA_1627 LOCUS_16260 sequence1:1619017..1619331(+) frameshift 1618975 WP_002992262.1 helix-turn-helix transcriptional regulator 100.0 83.9 100.0 MGA_1669 LOCUS_16680 sequence1:1666145..1666756(-) partial WP_000761138.1 ATP-binding protein 98.5 38.9 31.9 MGA_1672 LOCUS_16710 sequence1:1670390..1670752(-) partial WP_000151458.1 ATP-binding cassette domain-containing protein 89.2 50.2 46.7 MGA_1685 LOCUS_16840 sequence1:1683214..1683363(+) partial WP_000022160.1 site-specific integrase 95.9 12.2 85.1 MGA_1689 LOCUS_16880 sequence1:1684763..1685269(-) partial WP_038431592.1 hypothetical protein 92.9 66.8 92.9 MGA_1701 LOCUS_17000 sequence1:1695645..1695860(-) frameshift 1695895 WP_009880550.1 PTS ascorbate transporter subunit IIC 100.0 15.5 93.0 MGA_1702 LOCUS_17010 sequence1:1695788..1697023(-) frameshift 1695895 WP_009880550.1 PTS ascorbate transporter subunit IIC 91.5 81.9 96.5 MGA_1748 LOCUS_17470 sequence1:1749967..1751250(-) partial WP_010922710.1 LPXTG-anchored fibronectin-binding protein FbpA 41.7 47.0 88.8 MGA_1750 LOCUS_17490 sequence1:1755275..1756480(+) frameshift 1756611 WP_184006649.1 IS1182 family transposase 94.3 78.8 96.8 MGA_1752 LOCUS_17510 sequence1:1758165..1759295(-) partial WP_010922714.1 M protein 66.8 50.2 58.1 MGA_1762 LOCUS_17610 sequence1:1771180..1771464(-) partial WP_002993558.1 hypothetical protein 100.0 70.1 95.7 MGA_1766 LOCUS_17650 sequence1:1774072..1774377(-) partial WP_010922720.1 cysteine proteinase exotoxin SpeB 95.0 25.4 38.2 MGA_1814 LOCUS_18130 sequence1:1831311..1831550(-) internal_stop_codon 1831587..1831589(-) WP_007056318.1 helix-turn-helix domain-containing protein 91.1 60.5 68.1 MGA_1847 LOCUS_18460 sequence1:1862931..1863854(+) partial WP_003077408.1 helix-turn-helix transcriptional regulator 99.0 64.5 86.8 MGA_1848 LOCUS_18470 sequence1:1863920..1864672(+) partial WP_003032336.1 type IV secretion system DNA-binding domain-containing protein 100.0 68.3 90.0 MGA_1850 LOCUS_18490 sequence1:1865747..1866028(-) frameshift,internal_stop_codon 1866139..1866141(-),1865746..1865748(-) 1866081,1865613 WP_000402394.1 helix-turn-helix transcriptional regulator 100.0 47.2 45.2 MGA_1888 LOCUS_18870 sequence1:1908770..1909822(+) partial WP_010922804.1 YfhO family protein 100.0 40.8 97.7 MGA_1889 LOCUS_18880 sequence1:1910988..1911269(-) frameshift 1910990 WP_004270929.1 IS30 family transposase 79.6 21.3 40.5