# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_7	LOCUS_00070	sequence1:5540..5902(+)	frameshift		5385	WP_011108791.1	glycosyl transferase family 90	85.8	31.8	60.2
MGA_21	LOCUS_00210	sequence1:24521..25441(+)	partial			WP_209021411.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	95.8	42.0	36.9
MGA_48	LOCUS_00480	sequence1:57770..58174(+)	partial			WP_002851214.1	50S ribosomal protein L22	77.6	73.8	96.2
MGA_77	LOCUS_00770	sequence1:75253..76488(+)	partial			WP_035050627.1	site-specific DNA-methyltransferase	46.5	26.2	37.5
MGA_146	LOCUS_01450	sequence1:133592..133990(-)	partial			WP_034260979.1	DEAD/DEAH box helicase family protein	96.2	12.6	30.5
MGA_151	LOCUS_01500	sequence1:137905..138924(+)	partial			WP_002857891.1	capsular polysaccharide biosynthesis protein	97.3	48.6	62.1
MGA_188	LOCUS_01860	sequence1:173746..174210(-)	frameshift		173805	WP_010891936.1	ATP-grasp fold amidoligase family protein	95.5	18.6	55.1
MGA_189	LOCUS_01870	sequence1:174207..174452(-)	partial			WP_002858210.1	UDP-galactopyranose mutase	93.8	20.1	52.5
MGA_201	LOCUS_01990	sequence1:183983..185041(+)	partial			WP_010891936.1	ATP-grasp fold amidoligase family protein	92.6	40.2	43.7
MGA_204	LOCUS_02020	sequence1:187978..189462(-)	partial			WP_010891935.1	glycosyltransferase family 2 protein	23.1	25.6	42.1
MGA_211	LOCUS_02090	sequence1:196840..197121(+)	frameshift		197080,196795	WP_002857889.1	FkbM family methyltransferase	66.7	21.9	45.2
MGA_212	LOCUS_02100	sequence1:197150..197602(+)	frameshift		197079	WP_002857889.1	FkbM family methyltransferase	97.3	53.4	57.6
MGA_217	LOCUS_02150	sequence1:201144..201644(+)	partial			WP_001052085.1	DUF3883 domain-containing protein	95.8	64.3	36.8
MGA_229	LOCUS_02270	sequence1:213187..214371(-)	partial			WP_002858443.1	DUF2972 domain-containing protein	99.2	65.2	28.9
MGA_251	LOCUS_02490	sequence1:233361..234131(+)	partial			WP_011458963.1	hypothetical protein	87.9	53.3	29.3
MGA_291	LOCUS_02890	sequence1:268745..269071(+)	partial			WP_002851686.1	hypothetical protein	99.1	73.6	53.3
MGA_313	LOCUS_03110	sequence1:290745..294158(+)	frameshift		294134	WP_002864285.1	N-6 DNA methylase	99.3	80.0	64.4
MGA_314	LOCUS_03120	sequence1:294167..294853(+)	partial			WP_000187233.1	restriction endonuclease subunit S	83.3	36.4	45.3
MGA_372	LOCUS_03700	sequence1:362346..362702(-)	partial			WP_002859309.1	hypothetical protein	97.5	70.7	51.7
MGA_374	LOCUS_03720	sequence1:362945..365656(+)	partial			WP_000604593.1	glutamine-hydrolyzing GMP synthase	36.0	62.4	71.7
MGA_491	LOCUS_04890	sequence1:489480..489836(+)	partial			WP_003130078.1	sugar O-acetyltransferase	92.4	53.5	39.4
MGA_494	LOCUS_04920	sequence1:490668..491204(+)	partial			WP_000146565.1	CatB-related O-acetyltransferase	47.2	44.8	44.3
MGA_496	LOCUS_04940	sequence1:492215..493015(+)	partial			WP_011203397.1	formyltransferase family protein	86.5	58.0	42.7
MGA_497	LOCUS_04950	sequence1:493012..493647(+)	partial			WP_003020709.1	glycosyltransferase family 2 protein	55.5	34.6	37.6
MGA_501	LOCUS_04990	sequence1:496166..497350(+)	partial			WP_011707827.1	glycosyltransferase family 8 protein	56.1	56.3	27.9
MGA_515	LOCUS_05130	sequence1:511269..512381(-)	frameshift		512358	WP_010891876.1	DUF2972 domain-containing protein	85.9	73.3	40.6
MGA_516	LOCUS_05140	sequence1:512350..512637(-)	frameshift		512358	WP_010891876.1	DUF2972 domain-containing protein	89.5	20.2	51.6
MGA_523	LOCUS_05210	sequence1:519019..519333(+)	partial			WP_002852929.1	flagellar assembly protein FlgQ	99.0	70.5	62.9
MGA_534	LOCUS_05320	sequence1:530422..532782(+)	partial			WP_002852780.1	undecaprenyl-diphosphooligosaccharide--protein glycotransferase	50.5	55.7	66.0
MGA_547	LOCUS_05450	sequence1:543271..544173(-)	partial			WP_014659976.1	hypothetical protein	100.0	33.0	41.0
MGA_550	LOCUS_05480	sequence1:544790..546511(-)	partial			WP_014659976.1	hypothetical protein	98.3	57.3	51.1
MGA_568	LOCUS_05660	sequence1:562890..563852(-)	frameshift		563967	WP_000478646.1	hypothetical protein	98.1	62.4	40.8
MGA_569	LOCUS_05670	sequence1:563965..564399(-)	frameshift,internal_stop_codon	563979..563981(-)	563985	WP_000600936.1	hypothetical protein	95.8	27.2	36.6
MGA_598	LOCUS_05960	sequence1:591306..591956(-)	partial			WP_001262061.1	glycosyltransferase family 25 protein	72.2	62.3	35.8
MGA_611	LOCUS_06090	sequence1:604807..605223(-)	partial			WP_002864362.1	hypothetical protein	84.1	40.8	71.6
MGA_621	LOCUS_06190	sequence1:611213..611440(-)	partial			WP_002214609.1	type II toxin-antitoxin system RelE/ParE family toxin	96.0	66.1	40.3
MGA_622	LOCUS_06200	sequence1:611627..612409(-)	partial			WP_002852607.1	tyrosine-type recombinase/integrase	91.5	68.1	29.6
MGA_630	LOCUS_06280	sequence1:622812..624749(-)	partial			WP_048653110.1	lipase family protein	20.6	28.8	35.3
MGA_664	LOCUS_06620	sequence1:659842..660093(+)	frameshift		660063	WP_013368641.1	ParA family partition ATPase	74.7	28.6	53.2
MGA_690	LOCUS_06880	sequence1:682708..683502(-)	partial			WP_005449458.1	type IVB secretion system protein IcmH/DotU	68.9	68.4	29.7
MGA_704	LOCUS_07020	sequence1:693659..695017(-)	partial			WP_010948074.1	lpg2370 family Dot/Icm T4SS effector	56.2	82.4	29.5
MGA_713	LOCUS_07110	sequence1:701064..701240(-)	frameshift		701254	WP_005772654.1	BrnT family toxin	94.8	57.7	57.1
MGA_714	LOCUS_07120	sequence1:701419..702042(-)	partial			WP_011249728.1	tyrosine recombinase XerA	86.0	60.3	29.9
MGA_720	LOCUS_07180	sequence1:710978..712897(+)	partial			WP_000350101.1	class I SAM-dependent DNA methyltransferase	76.8	64.4	52.2
MGA_762	LOCUS_07600	sequence1:755516..755764(-)	frameshift,internal_stop_codon	755887..755889(-)	755841,755762,755908,755932,755567	WP_002864285.1	N-6 DNA methylase	70.7	5.5	41.3
MGA_764	LOCUS_07620	sequence1:755915..756187(-)	frameshift,internal_stop_codon	755887..755889(-)	755841,755762,755908,755932	WP_002864285.1	N-6 DNA methylase	94.4	5.8	50.6
MGA_792	LOCUS_07900	sequence1:781238..782614(-)	frameshift		781246	WP_002858443.1	DUF2972 domain-containing protein	84.7	64.9	28.3
MGA_810	LOCUS_08080	sequence1:797911..799407(-)	partial			WP_211204934.1	site-specific DNA-methyltransferase	71.5	64.8	31.7
MGA_822	LOCUS_08200	sequence1:807314..807763(+)	partial			WP_196835716.1	adenine-specific methyltransferase EcoRI family protein	59.7	20.3	39.8
MGA_823	LOCUS_08210	sequence1:808045..808557(+)	partial			WP_196835716.1	adenine-specific methyltransferase EcoRI family protein	84.1	37.5	36.0
MGA_824	LOCUS_08220	sequence1:808570..809745(+)	partial			WP_025163903.1	DUF262 domain-containing protein	34.3	37.2	28.3
MGA_830	LOCUS_08280	sequence1:813794..815155(+)	partial			WP_000162279.1	ATP-binding protein	90.1	72.8	32.1
MGA_842	LOCUS_08400	sequence1:823554..824198(+)	partial			WP_002858440.1	capsule biosynthesis protein CapA	50.9	18.2	43.6
MGA_879	LOCUS_08770	sequence1:861181..862083(-)	frameshift		862184	WP_000467025.1	anaerobic C4-dicarboxylate transporter DcuC	98.3	59.3	36.8
MGA_880	LOCUS_08780	sequence1:862140..862634(-)	frameshift		862187	WP_011705380.1	C4-dicarboxylate transporter DcuC	82.9	29.7	40.4
MGA_885	LOCUS_08830	sequence1:865460..866083(-)	partial			WP_000345576.1	protein-disulfide oxidoreductase DsbI	72.0	70.7	42.1
MGA_895	LOCUS_08930	sequence1:874129..874350(-)	partial			WP_004523495.1	YqaE/Pmp3 family membrane protein	72.6	82.8	66.0
MGA_913	LOCUS_09110	sequence1:891711..892433(+)	partial			WP_002722128.1	site-specific DNA-methyltransferase	91.7	65.6	23.1
MGA_929	LOCUS_09270	sequence1:909968..910591(+)	frameshift		910537	WP_002857950.1	DUF2920 family protein	94.7	50.7	43.4
MGA_930	LOCUS_09280	sequence1:910681..911196(+)	frameshift		910540	WP_002857950.1	DUF2920 family protein	86.5	36.4	54.7
MGA_935	LOCUS_09330	sequence1:914644..916377(-)	partial			WP_010891944.1	methyl-accepting chemotaxis protein	71.8	62.2	68.2
MGA_969	LOCUS_09670	sequence1:944369..945310(-)	partial			WP_011249728.1	tyrosine recombinase XerA	56.9	60.3	29.9
MGA_1017	LOCUS_10150	sequence1:970981..971400(-)	partial			WP_002865738.1	single-stranded DNA-binding protein	74.8	56.8	46.2
MGA_1024	LOCUS_10220	sequence1:978655..980907(+)	partial			WP_164930439.1	HD domain-containing protein	38.0	47.7	26.9
MGA_1026	LOCUS_10240	sequence1:981219..981650(+)	partial			WP_010942768.1	lytic transglycosylase domain-containing protein	82.5	70.2	44.2
MGA_1032	LOCUS_10300	sequence1:983867..984469(-)	partial			WP_002853387.1	thermonuclease family protein	73.0	80.0	43.8
MGA_1053	LOCUS_10510	sequence1:997266..998957(-)	partial			WP_013389859.1	phage antirepressor Ant	18.7	38.6	39.0
MGA_1066	LOCUS_10640	sequence1:1007682..1009850(-)	partial			WP_013087340.1	conjugal transfer protein TraN	15.4	18.4	46.2
MGA_1067	LOCUS_10650	sequence1:1010133..1011320(-)	partial			WP_013087339.1	conjugal transfer protein TraN	60.0	38.3	25.7
MGA_1068	LOCUS_10660	sequence1:1011332..1012798(-)	partial			WP_001200841.1	IncHI-type conjugal transfer protein TrhH	29.3	30.1	25.9
MGA_1069	LOCUS_10670	sequence1:1012786..1013322(-)	partial			WP_013087344.1	S26 family signal peptidase	50.0	54.2	36.7
MGA_1134	LOCUS_11320	sequence1:1068441..1070033(-)	partial			WP_000057937.1	methyl-accepting chemotaxis protein	64.0	58.7	27.4
MGA_1161	LOCUS_11590	sequence1:1099486..1100271(+)	partial			WP_013389859.1	phage antirepressor Ant	31.8	31.8	37.6
MGA_1162	LOCUS_11600	sequence1:1101329..1102537(-)	partial			WP_000323332.1	hypothetical protein	69.9	58.8	30.0
MGA_1186	LOCUS_11840	sequence1:1121994..1125290(-)	frameshift		1122032	WP_164930803.1	IGHMBP2 family helicase	38.2	83.5	24.6
MGA_1203	LOCUS_12010	sequence1:1145884..1146213(+)	partial			WP_002852445.1	hypothetical protein	100.0	73.3	61.8
MGA_1210	LOCUS_12080	sequence1:1152598..1152897(+)	partial			WP_002852583.1	hypothetical protein	75.8	74.3	64.0
MGA_1211	LOCUS_12090	sequence1:1152884..1153507(-)	frameshift		1153515	WP_002857950.1	DUF2920 family protein	98.1	52.2	42.7
MGA_1212	LOCUS_12100	sequence1:1153510..1154076(-)	frameshift		1153515	WP_002857950.1	DUF2920 family protein	95.2	44.6	44.2
MGA_1240	LOCUS_12380	sequence1:1185424..1186077(-)	partial			WP_012258297.1	DUF305 domain-containing protein	67.3	73.1	28.8
MGA_1248	LOCUS_12460	sequence1:1192232..1192813(-)	partial			WP_002858405.1	DUF2972 domain-containing protein	99.0	29.8	32.0
MGA_1260	LOCUS_12580	sequence1:1202931..1204148(-)	partial			WP_002858405.1	DUF2972 domain-containing protein	90.1	59.8	25.1
MGA_1279	LOCUS_12770	sequence1:1219885..1220922(-)	frameshift,internal_stop_codon	1220952..1220954(-),1220979..1220981(-)	1220984	WP_010883927.1	DNA methyltransferase	100.0	32.6	29.6
MGA_1280	LOCUS_12780	sequence1:1220913..1223075(-)	frameshift,internal_stop_codon	1220952..1220954(-),1220979..1220981(-)	1220984	WP_010883927.1	DNA methyltransferase	94.7	63.7	35.2
MGA_1333	LOCUS_13310	sequence1:1276274..1276561(+)	frameshift		1276531,1276813,1276759	WP_002864507.1	MATE family efflux transporter	89.5	19.9	59.1
MGA_1334	LOCUS_13320	sequence1:1276534..1276800(+)	frameshift		1276879,1276531,1276813,1276759	WP_002864507.1	MATE family efflux transporter	84.1	16.7	55.4
MGA_1335	LOCUS_13330	sequence1:1276974..1277384(+)	frameshift		1276881,1276770,1276815	WP_002864507.1	MATE family efflux transporter	93.4	28.7	43.3
MGA_1349	LOCUS_13470	sequence1:1290171..1291613(+)	internal_stop_codon	1291611..1291613(+)		WP_209611508.1	FAD-binding and (Fe-S)-binding domain-containing protein	99.2	51.5	53.0
MGA_1350	LOCUS_13480	sequence1:1291650..1292960(+)	internal_stop_codon	1291611..1291613(+)		WP_209611508.1	FAD-binding and (Fe-S)-binding domain-containing protein	98.9	45.9	47.1
MGA_1410	LOCUS_14080	sequence1:1359104..1360696(-)	frameshift		1360809	WP_010891905.1	LTA synthase family protein	99.2	81.4	47.7
MGA_1411	LOCUS_14090	sequence1:1360801..1361049(-)	frameshift		1360809	WP_010891905.1	LTA synthase family protein	93.9	12.0	57.0
MGA_1468	LOCUS_14660	sequence1:1414831..1415124(+)	frameshift		1415103	WP_002776146.1	FlaG family protein	94.8	76.9	43.0
MGA_1487	LOCUS_14850	sequence1:1432439..1433023(-)	frameshift		1433066	WP_002857950.1	DUF2920 family protein	98.5	49.0	37.9
MGA_1488	LOCUS_14860	sequence1:1433064..1433615(-)	frameshift		1433081	WP_010891921.1	DUF2920 family protein	95.6	44.0	46.1
MGA_1502	LOCUS_15000	sequence1:1443347..1443529(-)	partial			WP_002851842.1	cytochrome c	83.3	36.2	56.9
MGA_1544	LOCUS_15420	sequence1:1481774..1481929(-)	frameshift,internal_stop_codon	1481956..1481958(-)	1481958	WP_001024629.1	site-specific DNA-methyltransferase	78.4	13.9	70.0
MGA_1545	LOCUS_15430	sequence1:1481938..1482486(-)	frameshift,internal_stop_codon	1481956..1481958(-)	1481958,1482487	WP_001024629.1	site-specific DNA-methyltransferase	94.5	62.7	68.3
MGA_1546	LOCUS_15440	sequence1:1482461..1482673(-)	frameshift		1482487	WP_001024629.1	site-specific DNA-methyltransferase	70.0	17.1	65.3
MGA_1558	LOCUS_15560	sequence1:1491481..1491987(-)	partial			WP_011578509.1	restriction endonuclease subunit S	91.1	40.7	30.1
MGA_1559	LOCUS_15570	sequence1:1492074..1494338(-)	frameshift		1494423	WP_011476616.1	N-6 DNA methylase	40.2	42.9	54.1
MGA_1560	LOCUS_15580	sequence1:1494397..1495461(-)	frameshift		1494420	WP_001045361.1	N-6 DNA methylase	98.9	51.1	37.7
MGA_1601	LOCUS_15990	sequence1:1533021..1534211(-)	partial			WP_010891922.1	motility associated factor glycosyltransferase family protein	98.5	60.4	47.0
MGA_1602	LOCUS_16000	sequence1:1534183..1534524(-)	frameshift		1534519	WP_010891924.1	flagellin modification protein PseD	95.6	16.5	61.1
MGA_1603	LOCUS_16010	sequence1:1534508..1535050(-)	frameshift		1534510	WP_010891922.1	motility associated factor glycosyltransferase family protein	99.4	29.0	44.1
MGA_1668	LOCUS_16660	sequence1:1594122..1594481(-)	frameshift		1594554	WP_002788888.1	methyltransferase domain-containing protein	100.0	53.1	59.7
MGA_1669	LOCUS_16670	sequence1:1594528..1594794(-)	frameshift		1594554	WP_002788888.1	methyltransferase domain-containing protein	98.9	38.8	67.8
MGA_1705	LOCUS_17030	sequence1:1627137..1627436(-)	partial			WP_002851255.1	hypothetical protein	74.7	70.5	45.9
MGA_1709	LOCUS_17070	sequence1:1633980..1634204(-)	partial			WP_002859764.1	DUF4492 domain-containing protein	85.1	70.8	52.4
MGA_1725	LOCUS_17230	sequence1:1651235..1652515(+)	partial			WP_010874555.1	adenine-specific methyltransferase EcoRI family protein	41.5	49.8	31.1
MGA_1735	LOCUS_17330	sequence1:1660429..1661319(+)	partial			WP_002805290.1	flagellar basal body rod modification protein	74.3	74.5	74.5
MGA_1763	LOCUS_17610	sequence1:1684321..1684632(-)	frameshift		1684746,1684683,1684797	WP_002851996.1	manganese efflux pump MntP family protein	98.1	54.5	67.6
MGA_1783	LOCUS_17810	sequence1:1706038..1706607(+)	partial			WP_012870274.1	restriction endonuclease subunit S	95.8	49.5	37.1
MGA_1784	LOCUS_17820	sequence1:1706647..1707234(+)	partial			WP_010933538.1	restriction endonuclease subunit S	99.5	40.9	54.6
MGA_1827	LOCUS_18250	sequence1:1751304..1751804(-)	partial			WP_011263153.1	NAD(P)H-dependent oxidoreductase	87.3	72.2	39.2
MGA_1832	LOCUS_18300	sequence1:1754838..1755887(+)	frameshift,internal_stop_codon	1755885..1755887(+)	1755908	WP_209021411.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	98.9	45.3	38.0
MGA_1833	LOCUS_18310	sequence1:1755884..1756816(+)	frameshift,internal_stop_codon	1755885..1755887(+)	1755908	WP_209021411.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	94.8	40.9	32.2
MGA_1836	LOCUS_18340	sequence2:924..8819(+)	partial			WP_011861367.1	DEAD/DEAH box helicase family protein	51.5	42.7	27.2
MGA_1837	LOCUS_18350	sequence2:8904..9449(+)	partial			WP_005490290.1	hypothetical protein	72.4	74.9	36.1
MGA_1838	LOCUS_18360	sequence2:9439..10329(+)	partial			WP_011068063.1	nucleotidyl transferase AbiEii/AbiGii toxin family protein	77.7	74.8	31.2
MGA_1888	LOCUS_18860	sequence2:40236..41468(+)	partial			WP_011143795.1	AAA family ATPase	65.4	47.8	24.9
MGA_1919	LOCUS_19170	sequence2:63483..64835(+)	partial			WP_011460692.1	HipA domain-containing protein	70.7	79.3	31.0
MGA_1923	LOCUS_19210	sequence2:65563..66933(+)	partial			WP_010948074.1	lpg2370 family Dot/Icm T4SS effector	55.7	82.4	29.5
MGA_1926	LOCUS_19240	sequence2:68020..69855(+)	partial			WP_010946195.1	type IVB secretion system protein IcmO/DotL	79.2	64.2	22.5
MGA_1947	LOCUS_19450	sequence3:12666..13076(-)	partial			WP_000776464.1	type IV secretion system apparatus protein CagT	77.9	38.9	40.9
MGA_1953	LOCUS_19510	sequence3:17461..18072(-)	partial			WP_011264002.1	type IV secretion system protein VirB10	95.6	47.2	44.8
MGA_1961	LOCUS_19590	sequence3:22293..22913(-)	partial			WP_002286562.1	phage regulatory protein	50.0	38.4	44.7
MGA_1969	LOCUS_19670	sequence3:30506..31636(-)	partial			WP_001141540.1	DUF5710 domain-containing protein	94.9	28.2	31.5
MGA_1970	LOCUS_19680	sequence3:31644..32378(-)	partial			WP_004116510.1	DNA-binding protein	89.8	70.9	34.1
MGA_1977	LOCUS_19750	sequence5:361..972(+)	partial			WP_011222008.1	replication protein	77.3	74.9	30.8
