# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence01:193..582(+)	frameshift		558	WP_074390220.1	IS630 family transposase	80.6	36.9	36.5
MGA_2	LOCUS_00020	sequence01:569..1102(+)	frameshift		564,567	WP_099091451.1	IS630 family transposase	86.4	54.4	53.2
MGA_19	LOCUS_00190	sequence01:18339..18833(-)	frameshift		18244,18350	WP_148255720.1	IS630 family transposase	98.8	47.6	92.2
MGA_20	LOCUS_00200	sequence01:18898..19194(+)	partial			WP_002289178.1	6-phospho-beta-glucosidase	99.0	20.3	79.4
MGA_56	LOCUS_00550	sequence01:53883..54377(+)	partial			WP_164405178.1	helix-turn-helix transcriptional regulator	82.9	28.9	80.9
MGA_58	LOCUS_00570	sequence01:55061..55261(-)	partial			WP_012028325.1	hypothetical protein	93.9	34.3	64.5
MGA_76	LOCUS_00750	sequence01:71430..71927(+)	frameshift		71924	WP_148255714.1	IS630 family transposase	100.0	47.3	64.2
MGA_77	LOCUS_00760	sequence01:71968..72450(+)	frameshift,internal_stop_codon	72448..72450(+)	71867	WP_115265112.1	IS630 family transposase	100.0	45.7	76.2
MGA_86	LOCUS_00850	sequence01:78088..78249(+)	frameshift		78219	WP_001856133.1	ASCH domain-containing protein	81.1	29.5	97.7
MGA_98	LOCUS_00970	sequence01:93926..94123(+)	partial			WP_010921814.1	IS66-like element short variant transposase	96.9	14.0	81.0
MGA_129	LOCUS_01270	sequence02:30096..30416(+)	frameshift,internal_stop_codon	30573..30575(+),30414..30416(+)	30590	WP_148255714.1	IS630 family transposase	100.0	30.4	67.0
MGA_130	LOCUS_01280	sequence02:30550..31143(+)	frameshift,internal_stop_codon	30414..30416(+)	30533	WP_115265112.1	IS630 family transposase	98.0	55.1	73.6
MGA_138	LOCUS_01360	sequence02:45515..46780(+)	partial			WP_000417171.1	immunoglobulin A1 protease	91.4	19.3	59.9
MGA_139	LOCUS_01370	sequence02:46777..51306(+)	partial			WP_011836924.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	90.8	72.7	62.9
MGA_141	LOCUS_01380	sequence03:65..466(-)	partial			WP_001153836.1	IS30 family transposase	88.7	35.2	88.1
MGA_142	LOCUS_01390	sequence03:594..1091(+)	frameshift		1088	WP_148255714.1	IS630 family transposase	100.0	47.3	65.5
MGA_143	LOCUS_01400	sequence03:1048..1611(+)	frameshift,internal_stop_codon	1609..1611(+)	1031	WP_115265112.1	IS630 family transposase	98.9	52.9	74.1
MGA_150	LOCUS_01460	sequence05:544..1041(-)	frameshift		546	WP_148255714.1	IS630 family transposase	100.0	47.3	65.5
MGA_152	LOCUS_01470	sequence06:530..>1045(-)	frameshift		541	WP_148255720.1	IS630 family transposase	97.1	47.6	96.4
MGA_164	LOCUS_01590	sequence07:9188..11080(-)	partial			WP_011674758.1	DUF262 domain-containing protein	31.4	29.8	26.9
MGA_165	LOCUS_01600	sequence07:11074..12387(-)	partial			WP_000301909.1	DUF262 domain-containing protein	41.0	37.2	29.7
MGA_192	LOCUS_01870	sequence07:50489..50686(-)	internal_stop_codon	50489..50491(-),50711..50713(-)		WP_014017192.1	nucleotidyltransferase family protein	100.0	34.2	92.3
MGA_193	LOCUS_01880	sequence07:50711..50983(-)	internal_stop_codon	50489..50491(-),50711..50713(-)		WP_014017192.1	nucleotidyltransferase family protein	100.0	47.4	92.2
MGA_196	LOCUS_01910	sequence07:53482..53838(-)	frameshift,internal_stop_codon	53873..53875(-)	53860	WP_148255714.1	IS630 family transposase	91.5	31.5	56.4
MGA_245	LOCUS_02400	sequence07:93393..93692(+)	partial			WP_074390220.1	IS630 family transposase	93.9	31.9	54.8
MGA_246	LOCUS_02410	sequence07:93893..94645(-)	partial			WP_011705177.1	ABC transporter permease	68.8	50.1	23.8
MGA_250	LOCUS_02450	sequence07:97689..99008(-)	partial			WP_075677560.1	TOMM precursor leader peptide-binding protein	85.4	59.3	27.9
MGA_252	LOCUS_02470	sequence07:100908..101105(-)	internal_stop_codon	101181..101183(-)		WP_000694264.1	SP_0198 family lipoprotein	100.0	42.2	95.4
MGA_253	LOCUS_02480	sequence07:101181..101423(-)	internal_stop_codon	101181..101183(-)		WP_000694264.1	SP_0198 family lipoprotein	78.8	40.9	50.8
MGA_284	LOCUS_02790	sequence07:125817..126080(+)	partial			WP_003563849.1	SemiSWEET family transporter	80.5	68.3	48.6
MGA_285	LOCUS_02800	sequence07:126165..126578(-)	partial			WP_000166578.1	DNA-3-methyladenine glycosylase I	100.0	73.3	94.9
MGA_292	LOCUS_02870	sequence07:131520..131765(-)	frameshift		131782	WP_000540278.1	Y-family DNA polymerase	100.0	17.2	65.4
MGA_293	LOCUS_02880	sequence07:131947..132138(-)	partial			WP_000166578.1	DNA-3-methyladenine glycosylase I	98.4	33.2	75.8
MGA_310	LOCUS_03050	sequence07:147290..147496(-)	partial			WP_000444654.1	ABC transporter permease	98.5	29.1	70.1
MGA_328	LOCUS_03230	sequence07:165735..166136(+)	internal_stop_codon	166134..166136(+)		WP_001291561.1	tyrosine-type recombinase/integrase	100.0	32.8	100.0
MGA_329	LOCUS_03240	sequence07:166146..166952(+)	internal_stop_codon	166134..166136(+)		WP_001291561.1	tyrosine-type recombinase/integrase	100.0	66.2	100.0
MGA_338	LOCUS_03330	sequence07:174445..174996(-)	internal_stop_codon	175030..175032(-)		WP_000862401.1	MFS transporter	100.0	44.9	91.3
MGA_339	LOCUS_03340	sequence07:175030..175671(-)	internal_stop_codon	175030..175032(-)		WP_000862401.1	MFS transporter	100.0	52.2	93.4
MGA_348	LOCUS_03430	sequence08:5598..6293(-)	frameshift		6285	WP_001229573.1	amino acid ABC transporter ATP-binding protein	66.7	61.1	96.8
MGA_349	LOCUS_03440	sequence08:6217..6456(-)	frameshift		6285	WP_001229573.1	amino acid ABC transporter ATP-binding protein	73.4	23.0	98.3
MGA_362	LOCUS_03570	sequence08:20819..21007(+)	frameshift		20902	WP_000078128.1	uracil-DNA glycosylase family protein	45.2	14.6	92.9
MGA_363	LOCUS_03580	sequence08:21022..21396(+)	frameshift		20902	WP_000078140.1	uracil-DNA glycosylase family protein	100.0	64.6	95.2
MGA_387	LOCUS_03810	sequence09:15072..15245(-)	frameshift		15288	WP_000693394.1	hypothetical protein	98.2	38.1	89.3
MGA_397	LOCUS_03910	sequence09:22764..23270(+)	frameshift		23252	WP_148255720.1	IS630 family transposase	98.8	47.6	98.8
MGA_398	LOCUS_03920	sequence09:23302..23811(+)	frameshift		23252	WP_148255720.1	IS630 family transposase	100.0	48.4	97.6
MGA_453	LOCUS_04470	sequence10:12979..13506(-)	frameshift		13583	WP_000436473.1	ISL3 family transposase	100.0	42.8	94.3
MGA_454	LOCUS_04480	sequence10:13542..13790(-)	frameshift		13789,13582	WP_000436473.1	ISL3 family transposase	75.6	15.2	90.3
MGA_455	LOCUS_04490	sequence10:13787..14245(-)	frameshift,internal_stop_codon	13598..13600(-)	13789,13615	WP_120770310.1	ISL3 family transposase	90.1	32.8	92.0
MGA_465	LOCUS_04590	sequence10:20100..20231(-)	partial			WP_000268685.1	SPJ_0845 family protein	69.8	69.8	100.0
MGA_486	LOCUS_04800	sequence10:31911..32138(+)	partial			WP_012972529.1	tyrosine-type recombinase/integrase	93.3	68.0	90.0
MGA_487	LOCUS_04810	sequence10:32342..32584(-)	frameshift,internal_stop_codon	32618..32620(-)	32669	WP_148255728.1	IS5 family transposase	100.0	30.0	92.5
MGA_488	LOCUS_04820	sequence10:32655..32861(-)	frameshift		32868	WP_000997214.1	IS5 family transposase	100.0	52.7	89.7
MGA_489	LOCUS_04830	sequence10:32839..33042(-)	frameshift,internal_stop_codon	32618..32620(-)	32868,32678	WP_001105159.1	IS5 family transposase	86.6	21.7	96.6
MGA_500	LOCUS_04940	sequence10:44959..45417(+)	partial			WP_148255714.1	IS630 family transposase	82.2	35.8	96.0
MGA_501	LOCUS_04950	sequence10:45304..45693(-)	frameshift		45733	WP_148255720.1	IS630 family transposase	93.0	34.4	97.5
MGA_502	LOCUS_04960	sequence10:45725..46231(-)	frameshift		45730	WP_148255714.1	IS630 family transposase	100.0	48.1	95.2
MGA_503	LOCUS_04970	sequence10:46239..46400(-)	internal_stop_codon	46620..46622(-)		WP_000724617.1	CAP domain-containing protein	86.8	11.6	58.7
MGA_509	LOCUS_05020	sequence10:48911..49234(+)	frameshift		48848,48855	WP_018211329.1	ABC transporter permease	95.3	37.9	35.3
MGA_511	LOCUS_05040	sequence10:50799..50951(+)	internal_stop_codon	50583..50585(+),50949..50951(+),50520..50522(+)		WP_148255714.1	IS630 family transposase	98.0	14.0	59.2
MGA_526	LOCUS_05190	sequence10:61522..61725(+)	frameshift		61692	WP_001105159.1	IS5 family transposase	86.6	21.7	87.9
MGA_537	LOCUS_05260	sequence12:10629..11351(-)	internal_stop_codon	11367..11369(-)		WP_011254026.1	IS1182 family transposase	61.7	28.3	37.3
MGA_540	LOCUS_05290	sequence12:12293..12745(+)	internal_stop_codon	12743..12745(+)		WP_166727394.1	TIGR01212 family radical SAM protein	100.0	78.1	97.3
MGA_552	LOCUS_05410	sequence12:23152..30351(+)	partial			WP_000751576.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	67.4	83.4	64.2
MGA_567	LOCUS_05560	sequence12:42837..43070(+)	partial			WP_000512148.1	hypothetical protein	62.3	73.8	77.1
MGA_580	LOCUS_05690	sequence12:54862..55416(+)	partial			WP_012545472.1	HesA/MoeB/ThiF family protein	47.8	36.8	39.8
MGA_588	LOCUS_05770	sequence12:62056..62625(-)	frameshift		62660	WP_000436473.1	ISL3 family transposase	98.4	45.5	94.6
MGA_612	LOCUS_06000	sequence13:14106..14321(+)	partial			WP_000693394.1	hypothetical protein	83.1	40.1	84.7
MGA_627	LOCUS_06150	sequence13:30326..30520(-)	internal_stop_codon	30326..30328(-)		WP_000997214.1	IS5 family transposase	100.0	49.6	81.2
MGA_636	LOCUS_06240	sequence13:37151..37399(-)	frameshift		37358	WP_012775657.1	sucrose phosphorylase	82.9	14.1	57.4
MGA_637	LOCUS_06250	sequence13:37329..37697(-)	frameshift		37699,37357	WP_012775657.1	sucrose phosphorylase	93.4	24.5	88.1
MGA_638	LOCUS_06260	sequence13:37673..38242(-)	frameshift,internal_stop_codon	38494..38496(-)	37698,38286	WP_012775657.1	sucrose phosphorylase	95.8	37.6	95.6
MGA_639	LOCUS_06270	sequence13:38272..38478(-)	frameshift,internal_stop_codon	38494..38496(-)	38286	WP_012775657.1	sucrose phosphorylase	97.1	13.7	89.4
MGA_665	LOCUS_06530	sequence13:61570..62721(-)	frameshift		62836	WP_000672613.1	pneumococcal-type histidine triad protein	100.0	28.9	85.6
MGA_666	LOCUS_06540	sequence13:62834..63637(-)	frameshift,internal_stop_codon	63733..63735(-)	63747,63726	WP_000672596.1	pneumococcal histidine triad protein PhtE	71.9	18.9	87.8
MGA_667	LOCUS_06550	sequence13:63733..64449(-)	frameshift,internal_stop_codon	63733..63735(-)	63747,63726	WP_000672596.1	pneumococcal histidine triad protein PhtE	98.3	22.5	94.4
MGA_675	LOCUS_06630	sequence13:75171..75629(+)	frameshift		75626	WP_120770310.1	ISL3 family transposase	90.1	32.8	91.2
MGA_676	LOCUS_06640	sequence13:75626..76387(+)	frameshift		75626	WP_120770310.1	ISL3 family transposase	100.0	60.5	93.7
MGA_696	LOCUS_06840	sequence14:266..466(-)	partial			WP_000169093.1	U32 family peptidase	98.5	15.2	93.8
MGA_697	LOCUS_06850	sequence14:388..1293(+)	frameshift		1266	WP_008362626.1	site-specific DNA-methyltransferase	90.4	69.9	64.7
MGA_706	LOCUS_06920	sequence15:269..469(+)	internal_stop_codon	242..244(+)		WP_074390220.1	IS630 family transposase	84.8	19.9	53.6
MGA_708	LOCUS_06940	sequence15:663..839(-)	frameshift,internal_stop_codon	950..952(-),662..664(-)	1058,883	WP_000998260.1	glycosyltransferase	100.0	9.1	50.8
MGA_746	LOCUS_07320	sequence15:40991..41710(-)	frameshift		41744	WP_000171205.1	alpha,alpha-phosphotrehalase	100.0	44.2	97.9
MGA_747	LOCUS_07330	sequence15:41724..42608(-)	frameshift		41735	WP_001162367.1	alpha,alpha-phosphotrehalase	99.0	53.8	97.6
MGA_750	LOCUS_07360	sequence15:45802..46320(+)	frameshift		46317	WP_000436473.1	ISL3 family transposase	91.3	38.4	93.6
MGA_751	LOCUS_07370	sequence15:46317..47078(+)	frameshift		46317	WP_120770310.1	ISL3 family transposase	100.0	60.5	94.5
MGA_758	LOCUS_07440	sequence15:53900..54067(-)	partial			WP_148255728.1	IS5 family transposase	83.6	17.2	82.6
MGA_759	LOCUS_07450	sequence15:54106..>54624(-)	partial			WP_074390220.1	IS630 family transposase	95.9	58.5	52.1
MGA_763	LOCUS_07480	sequence16:1229..1744(+)	internal_stop_codon	1742..1744(+)		WP_000866927.1	pyroglutamyl-peptidase I	100.0	79.9	95.3
MGA_786	LOCUS_07710	sequence16:28312..28521(-)	partial			WP_001153836.1	IS30 family transposase	89.9	17.9	77.4
MGA_792	LOCUS_07770	sequence16:33452..33709(-)	partial			WP_000946120.1	ABC transporter ATP-binding protein	100.0	16.5	95.3
MGA_793	LOCUS_07780	sequence16:33971..34138(-)	partial			WP_181146406.1	N-acetylmuramoyl-L-alanine amidase family protein	100.0	15.7	57.1
MGA_801	LOCUS_07850	sequence17:9809..9964(+)	internal_stop_codon	9962..9964(+)		WP_000026641.1	Na/Pi cotransporter family protein	100.0	9.4	94.1
MGA_805	LOCUS_07890	sequence17:14846..15157(-)	internal_stop_codon	14846..14848(-)		WP_000333647.1	GNAT family N-acetyltransferase	100.0	69.1	96.1
MGA_806	LOCUS_07900	sequence17:15501..16019(-)	frameshift		16026	WP_148255728.1	IS5 family transposase	100.0	64.4	92.4
MGA_807	LOCUS_07910	sequence17:15997..16290(-)	frameshift		16026	WP_001105159.1	IS5 family transposase	59.8	21.7	87.9
MGA_808	LOCUS_07920	sequence17:16344..17327(-)	frameshift		17365	WP_000845539.1	MFS transporter	94.5	76.4	32.8
MGA_819	LOCUS_08030	sequence17:28717..28950(+)	internal_stop_codon	28948..28950(+)		WP_012972599.1	TrkH family potassium uptake protein	100.0	16.1	74.0
MGA_820	LOCUS_08040	sequence17:29134..29925(+)	internal_stop_codon	28948..28950(+)		WP_010976430.1	TrkH family potassium uptake protein	97.7	53.7	94.9
MGA_823	LOCUS_08050	sequence18:3232..3402(-)	internal_stop_codon	3232..3234(-)		WP_140834174.1	Rpn family recombination-promoting nuclease/putative transposase	100.0	18.2	91.1
MGA_838	LOCUS_08200	sequence18:16438..16746(-)	partial			WP_000196324.1	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	91.2	21.8	94.6
MGA_869	LOCUS_08510	sequence18:52272..53039(-)	partial			WP_012546645.1	DNA methyltransferase	96.1	57.4	38.3
MGA_956	LOCUS_09370	sequence19:70262..73873(-)	partial			WP_001032521.1	SpGH101 family endo-alpha-N-acetylgalactosaminidase	25.4	13.1	34.1
MGA_957	LOCUS_09380	sequence19:74590..77898(-)	frameshift		77857	WP_129559156.1	LPXTG-anchored neuraminidase NanA	76.0	85.0	70.8
MGA_958	LOCUS_09390	sequence19:77837..78025(-)	frameshift		77857	WP_129559156.1	LPXTG-anchored neuraminidase NanA	88.7	5.7	98.2
MGA_980	LOCUS_09610	sequence19:99859..100602(-)	partial			WP_153018271.1	ABC transporter ATP-binding protein	88.7	71.1	44.3
MGA_995	LOCUS_09760	sequence19:113431..114504(-)	partial			WP_012775562.1	ABC transporter substrate-binding protein	99.7	66.4	78.1
MGA_996	LOCUS_09770	sequence19:114435..114947(-)	partial			WP_012775562.1	ABC transporter substrate-binding protein	81.2	25.7	76.8
MGA_1028	LOCUS_10090	sequence19:148846..149274(-)	frameshift,internal_stop_codon	149361..149363(-)	149417	WP_000174446.1	DUF421 domain-containing protein	100.0	67.8	83.9
MGA_1038	LOCUS_10190	sequence19:158582..158767(-)	internal_stop_codon	158768..158770(-)		WP_000850938.1	DpnD/PcfM family protein	100.0	39.9	91.8
MGA_1039	LOCUS_10200	sequence19:158768..158944(-)	internal_stop_codon	158768..158770(-)		WP_000850938.1	DpnD/PcfM family protein	100.0	37.3	72.4
MGA_1040	LOCUS_10210	sequence19:158958..159254(-)	frameshift		159426,159429	WP_000418960.1	type-2 restriction enzyme DpnI	100.0	38.6	93.9
MGA_1041	LOCUS_10220	sequence19:159406..159720(-)	frameshift		159432	WP_000418960.1	type-2 restriction enzyme DpnI	99.0	40.6	91.3
MGA_1042	LOCUS_10230	sequence19:159854..160018(-)	internal_stop_codon	160034..160036(-)		WP_045612809.1	hypothetical protein	98.1	20.5	86.8
MGA_1043	LOCUS_10240	sequence19:160034..160198(-)	internal_stop_codon	160034..160036(-)		WP_045612809.1	hypothetical protein	100.0	20.8	85.2
MGA_1087	LOCUS_10670	sequence20:4738..4926(+)	internal_stop_codon	4714..4716(+)		WP_000693394.1	hypothetical protein	59.7	32.7	56.2
MGA_1092	LOCUS_10720	sequence20:11625..11978(+)	frameshift		11915	WP_000748873.1	peptide ABC transporter substrate-binding protein	68.4	12.3	60.0
MGA_1093	LOCUS_10730	sequence20:11975..12904(+)	frameshift,internal_stop_codon	12981..12983(+)	11915,12899	WP_011836902.1	peptide ABC transporter substrate-binding protein	99.7	47.2	64.0
MGA_1094	LOCUS_10740	sequence20:12997..13482(+)	frameshift,internal_stop_codon	12980..12982(+)	12898,13471	WP_011836902.1	peptide ABC transporter substrate-binding protein	98.8	24.3	52.8
MGA_1100	LOCUS_10800	sequence21:2989..3729(+)	internal_stop_codon	2965..2967(+)		WP_000893546.1	sensor histidine kinase	99.6	67.1	89.0
MGA_1132	LOCUS_11100	sequence23:138..410(-)	partial			WP_000651198.1	PaaI family thioesterase	96.7	64.9	96.6
MGA_1143	LOCUS_11210	sequence23:11142..11291(-)	partial			WP_000082887.1	nuclear transport factor 2 family protein	100.0	19.3	91.8
MGA_1161	LOCUS_11390	sequence23:25623..25985(-)	frameshift		26025	WP_000040325.1	group II intron reverse transcriptase/maturase	100.0	28.2	92.5
MGA_1162	LOCUS_11400	sequence23:26002..26304(-)	frameshift		26025	WP_000040325.1	group II intron reverse transcriptase/maturase	96.0	22.6	91.7
MGA_1164	LOCUS_11420	sequence23:28673..28888(-)	partial			WP_012775553.1	recombinase family protein	87.3	11.8	58.1
MGA_1167	LOCUS_11450	sequence23:30187..30477(-)	internal_stop_codon	30187..30189(-)		WP_004804477.1	KilA-N domain-containing protein	100.0	36.0	59.4
MGA_1180	LOCUS_11580	sequence23:38850..39410(-)	partial			WP_011836463.1	mechanosensitive ion channel family protein	96.2	62.4	62.0
MGA_1195	LOCUS_11720	sequence24:1161..2981(-)	partial			WP_000724617.1	CAP domain-containing protein	34.0	52.2	62.1
MGA_1200	LOCUS_11770	sequence24:7755..>8715(-)	partial			WP_137607921.1	Ig-like domain-containing protein	27.6	5.7	59.1
MGA_1202	LOCUS_11780	sequence25:676..831(+)	internal_stop_codon	829..831(+)		WP_191620026.1	transposase	51.0	10.1	96.2
MGA_1203	LOCUS_11790	sequence25:889..1104(+)	internal_stop_codon	829..831(+)		WP_191620026.1	transposase	100.0	27.5	93.0
MGA_1227	LOCUS_12020	sequence25:25995..26144(+)	partial			WP_000424414.1	SPH_0224 family bacteriocin-like peptide	93.9	37.1	73.9
MGA_1230	LOCUS_12050	sequence25:27438..27743(+)	partial			WP_000424424.1	SP_0115 family bacteriocin-like peptide	52.5	50.0	50.8
MGA_1237	LOCUS_12100	sequence26:2026..2631(+)	frameshift		2613	WP_054278873.1	Abi family protein	72.1	44.8	26.6
MGA_1322	LOCUS_12950	sequence27:64635..64985(+)	partial			WP_000693394.1	hypothetical protein	88.8	70.1	78.6
MGA_1330	LOCUS_13010	sequence28:3043..3555(+)	frameshift		3522	WP_000813807.1	flavin reductase family protein	94.7	83.9	85.1
MGA_1336	LOCUS_13070	sequence28:6962..8203(+)	partial			WP_000038635.1	helicase	12.3	38.9	66.7
MGA_1363	LOCUS_13320	sequence29:344..562(+)	internal_stop_codon	335..337(+)		WP_120719025.1	IS3 family transposase	98.6	15.8	95.8
MGA_1367	LOCUS_13360	sequence29:4703..5251(-)	partial			WP_053954397.1	ImmA/IrrE family metallo-endopeptidase	61.0	58.9	36.0
MGA_1370	LOCUS_13390	sequence29:10689..11756(+)	partial			WP_055270450.1	bacteriophage abortive infection AbiH family protein	91.5	74.4	23.1
MGA_1371	LOCUS_13400	sequence29:11753..12874(+)	partial			WP_011109322.1	restriction endonuclease subunit S	46.6	45.4	41.5
MGA_1376	LOCUS_13450	sequence29:17336..17554(-)	partial			WP_000136824.1	SPFH domain-containing protein	70.8	15.2	92.2
MGA_1384	LOCUS_13530	sequence29:25780..26325(+)	partial			WP_000434945.1	quorum-sensing system transcriptional regulator Rgg	100.0	64.0	94.5
MGA_1389	LOCUS_13570	sequence30:315..530(-)	frameshift		341	WP_000290661.1	SGNH/GDSL hydrolase family protein	93.0	31.3	90.9
MGA_1399	LOCUS_13660	sequence31:6675..7358(-)	frameshift		6677	WP_010989556.1	ABC transporter ATP-binding protein/permease	99.1	33.5	45.6
MGA_1412	LOCUS_13790	sequence31:20663..21055(+)	frameshift		21037	WP_001105159.1	IS5 family transposase	96.2	46.8	96.8
MGA_1413	LOCUS_13800	sequence31:21052..21384(+)	frameshift		21040	WP_001105159.1	IS5 family transposase	100.0	41.2	96.4
MGA_1414	LOCUS_13810	sequence31:21534..21950(+)	partial			WP_011101495.1	GNAT family N-acetyltransferase	77.5	73.9	34.6
MGA_1435	LOCUS_14020	sequence31:42017..42487(-)	partial			WP_148255728.1	IS5 family transposase	100.0	58.4	93.6
MGA_1436	LOCUS_14030	sequence31:42492..42662(+)	partial			WP_044012301.1	cupin domain-containing protein	80.4	28.5	93.3
MGA_1444	LOCUS_14110	sequence31:49103..49528(+)	partial			WP_000608644.1	IS1380-like element ISEcp1 family transposase	73.8	25.0	35.8
MGA_1445	LOCUS_14120	sequence31:49643..49894(-)	internal_stop_codon	49997..49999(-)		WP_002986681.1	transcriptional regulator Rgg4/ComR	62.7	17.2	59.6
MGA_1488	LOCUS_14540	sequence34:6474..7334(-)	frameshift		6554,7374	WP_000040325.1	group II intron reverse transcriptase/maturase	94.4	63.5	94.1
MGA_1489	LOCUS_14550	sequence34:7351..7653(-)	frameshift		7374	WP_000040325.1	group II intron reverse transcriptase/maturase	96.0	22.6	93.8
MGA_1580	LOCUS_15420	sequence38:8144..8530(-)	frameshift		8504,8486,8144	WP_099091451.1	IS630 family transposase	93.8	42.8	76.9
MGA_1581	LOCUS_15430	sequence38:8478..8825(-)	frameshift		8492	WP_074390220.1	IS630 family transposase	91.3	37.2	79.0
MGA_1582	LOCUS_15440	sequence38:8920..9093(+)	internal_stop_codon	9091..9093(+),9253..9255(+)		WP_000603333.1	Rpn family recombination-promoting nuclease/putative transposase	100.0	19.3	96.5
MGA_1583	LOCUS_15450	sequence38:9597..9890(+)	frameshift		9450	WP_000603344.1	Rpn family recombination-promoting nuclease/putative transposase	100.0	30.0	74.3
MGA_1584	LOCUS_15460	sequence38:10095..10346(+)	frameshift,internal_stop_codon	10345..10347(+)	10257	WP_001153836.1	IS30 family transposase	48.2	11.6	80.0
MGA_1585	LOCUS_15470	sequence38:10623..10784(+)	internal_stop_codon	10782..10784(+)		WP_148255720.1	IS630 family transposase	100.0	15.2	98.1
MGA_1586	LOCUS_15480	sequence38:10863..11129(+)	frameshift,internal_stop_codon	10782..10784(+)	11123	WP_148255714.1	IS630 family transposase	100.0	25.2	92.0
MGA_1587	LOCUS_15490	sequence38:11161..11667(+)	frameshift		11120	WP_148255720.1	IS630 family transposase	54.2	26.1	92.3
MGA_1588	LOCUS_15500	sequence38:11894..12736(+)	partial			WP_000725079.1	N-acetylmuramoyl-L-alanine amidase family protein	35.7	22.6	70.3
MGA_1589	LOCUS_15510	sequence38:13188..13460(-)	partial			WP_000248706.1	transposase	97.8	59.1	94.3
MGA_1597	LOCUS_15590	sequence38:21885..22739(+)	partial			WP_000725079.1	N-acetylmuramoyl-L-alanine amidase family protein	29.6	18.8	47.1
MGA_1601	LOCUS_15630	sequence38:24885..25700(+)	partial			WP_000584691.1	GHKL domain-containing protein	100.0	60.5	97.4
MGA_1622	LOCUS_15840	sequence38:39663..40259(+)	partial			WP_005667625.1	thiol reductant ABC exporter subunit CydC	96.0	38.0	30.7
MGA_1652	LOCUS_16140	sequence38:76646..76816(-)	partial			WP_001856132.1	hypothetical protein	78.6	69.8	93.2
MGA_1666	LOCUS_16270	sequence39:12580..13146(-)	frameshift		12618	WP_000603333.1	Rpn family recombination-promoting nuclease/putative transposase	97.9	62.4	95.1
MGA_1668	LOCUS_16280	sequence40:286..639(-)	partial			WP_010946341.1	SufS family cysteine desulfurase	90.6	26.8	35.1
MGA_1670	LOCUS_16300	sequence40:3090..3476(+)	frameshift,internal_stop_codon	3057..3059(+),3075..3077(+)	3455	WP_000175407.1	FAD:protein FMN transferase	96.1	40.1	89.4
MGA_1671	LOCUS_16310	sequence40:3487..3735(+)	frameshift		3455	WP_000175407.1	FAD:protein FMN transferase	100.0	26.7	84.1
MGA_1672	LOCUS_16320	sequence40:3931..4218(-)	frameshift,internal_stop_codon	4497..4499(-)	4264,4457	WP_148255728.1	IS5 family transposase	100.0	35.6	90.5
MGA_1673	LOCUS_16330	sequence40:4244..4450(-)	frameshift,internal_stop_codon	4497..4499(-)	4457	WP_000997214.1	IS5 family transposase	100.0	52.7	89.7
MGA_1674	LOCUS_16340	sequence40:4497..4619(-)	frameshift,internal_stop_codon	4497..4499(-)	4264,4460	WP_148255728.1	IS5 family transposase	100.0	16.5	77.3
MGA_1695	LOCUS_16550	sequence40:24475..24810(-)	partial			WP_000745378.1	CPBP family intramembrane metalloprotease	100.0	49.8	94.6
MGA_1698	LOCUS_16580	sequence40:26459..26887(+)	frameshift,internal_stop_codon	26885..26887(+)	26938	WP_000724617.1	CAP domain-containing protein	94.4	32.7	38.1
MGA_1699	LOCUS_16590	sequence40:26901..27224(+)	frameshift,internal_stop_codon	26885..26887(+)	26905	WP_000725079.1	N-acetylmuramoyl-L-alanine amidase family protein	77.6	18.6	78.3
MGA_1707	LOCUS_16670	sequence40:37289..37471(-)	partial			WP_001856132.1	hypothetical protein	63.3	60.3	89.5
MGA_1733	LOCUS_16920	sequence42:4866..5204(-)	frameshift		5227,4870	WP_000800707.1	Rgg/GadR/MutR family transcriptional regulator	99.1	38.9	100.0
MGA_1734	LOCUS_16930	sequence42:5213..5551(-)	frameshift		5227	WP_000800707.1	Rgg/GadR/MutR family transcriptional regulator	100.0	39.3	96.4
MGA_1744	LOCUS_17030	sequence42:12625..12813(-)	partial			WP_181146406.1	N-acetylmuramoyl-L-alanine amidase family protein	100.0	17.4	96.8
MGA_1749	LOCUS_17080	sequence42:16899..18374(-)	frameshift		18385	WP_000731786.1	ABC transporter ATP-binding protein	100.0	83.4	96.7
MGA_1750	LOCUS_17090	sequence42:18323..18667(-)	frameshift		18385	WP_000731786.1	ABC transporter ATP-binding protein	82.5	16.0	100.0
MGA_1757	LOCUS_17160	sequence42:23920..27030(-)	internal_stop_codon	27058..27060(-)		WP_000527121.1	YSIRK signal domain/LPXTG anchor domain surface protein	29.3	13.1	33.1
MGA_1758	LOCUS_17170	sequence42:27058..27630(-)	partial			WP_012972489.1	YSIRK signal domain/LPXTG anchor domain surface protein	40.5	7.7	51.3
MGA_1774	LOCUS_17330	sequence43:15672..16196(-)	partial			WP_074390220.1	IS630 family transposase	96.6	59.6	49.4
MGA_1777	LOCUS_17350	sequence45:866..1783(-)	partial			WP_000589007.1	ISNCY family transposase	71.5	53.6	30.9
MGA_1808	LOCUS_17630	sequence48:2031..2336(+)	partial			WP_000693394.1	hypothetical protein	87.1	59.9	84.1
MGA_1828	LOCUS_17830	sequence49:17757..18023(-)	frameshift,internal_stop_codon	18102..18104(-)	17762	WP_148255714.1	IS630 family transposase	100.0	25.2	92.0
MGA_1829	LOCUS_17840	sequence49:18102..18263(-)	internal_stop_codon	18102..18104(-)		WP_148255720.1	IS630 family transposase	100.0	15.2	98.1
MGA_1839	LOCUS_17930	sequence50:7094..7534(+)	frameshift		7030,6925,7006	WP_140834349.1	DNA alkylation repair protein	97.9	65.6	91.6
MGA_1841	LOCUS_17950	sequence50:8168..8998(+)	partial			WP_000771103.1	choline-binding protein CbpC	72.8	68.9	41.9
MGA_1897	LOCUS_18470	sequence54:520..765(-)	frameshift		856,799	WP_001035315.1	pneumococcal surface protein A	98.8	12.9	65.0
MGA_1901	LOCUS_18490	sequence55:2929..3333(+)	frameshift		3282	WP_191620026.1	transposase	59.7	31.0	88.8
MGA_1902	LOCUS_18500	sequence55:3377..3688(+)	frameshift		3282	WP_191620026.1	transposase	100.0	39.9	85.4
MGA_1903	LOCUS_18510	sequence55:4191..4682(-)	partial			WP_000248984.1	LPXTG cell wall anchor domain-containing protein	82.2	64.9	32.6
MGA_1905	LOCUS_18520	sequence56:84..395(-)	frameshift		489	WP_191620026.1	transposase	100.0	39.9	90.3
MGA_1906	LOCUS_18530	sequence56:439..804(-)	frameshift		489	WP_191620026.1	transposase	84.3	39.5	87.3
MGA_1945	LOCUS_18920	sequence56:33581..33784(-)	frameshift,internal_stop_codon	33815..33817(-)	33842	WP_010921814.1	IS66-like element short variant transposase	100.0	14.9	79.1
MGA_1954	LOCUS_18990	sequence57:8194..9021(-)	internal_stop_codon	9055..9057(-)		WP_003244282.1	class I SAM-dependent DNA methyltransferase	98.2	29.7	50.4
MGA_1955	LOCUS_19000	sequence57:9055..10101(-)	internal_stop_codon	9055..9057(-)		WP_003244282.1	class I SAM-dependent DNA methyltransferase	91.1	36.2	47.8
MGA_1961	LOCUS_19060	sequence57:15323..15766(-)	frameshift		15818	WP_000152216.1	YhfC family glutamic-type intramembrane protease	100.0	58.8	91.2
MGA_1962	LOCUS_19070	sequence57:15816..16076(-)	frameshift		15818	WP_000152216.1	YhfC family glutamic-type intramembrane protease	100.0	34.4	86.0
MGA_1964	LOCUS_19090	sequence57:17300..17644(-)	partial			WP_002358120.1	enterococcin EntV	99.1	68.8	57.3
MGA_1989	LOCUS_19340	sequence57:40319..40495(-)	partial			WP_000048054.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_1995	LOCUS_19380	sequence58:1795..5970(-)	partial			WP_010965188.1	phage tail tape measure protein	35.4	28.4	26.9
MGA_1999	LOCUS_19420	sequence58:6845..7441(-)	partial			WP_011475952.1	phage tail protein	68.2	63.4	27.7
MGA_2030	LOCUS_19730	sequence58:21714..22523(-)	partial			WP_010965237.1	phage replisome organizer N-terminal domain-containing protein	61.3	55.9	55.8
MGA_2053	LOCUS_19950	sequence59:4544..4909(-)	partial			WP_011837111.1	VanZ family protein	99.2	61.9	45.8
MGA_2061	LOCUS_20030	sequence59:11933..12892(+)	partial			WP_000771103.1	choline-binding protein CbpC	42.6	39.6	47.1
MGA_2063	LOCUS_20050	sequence59:14050..14967(-)	partial			WP_011837568.1	MFS transporter	94.8	69.7	34.9
MGA_2068	LOCUS_20090	sequence60:1470..4496(-)	partial			WP_002286502.1	phage tail tape measure protein	72.4	59.7	21.2
MGA_2080	LOCUS_20210	sequence60:9245..9814(-)	partial			WP_010922217.1	DUF4355 domain-containing protein	72.0	76.8	48.6
MGA_2083	LOCUS_20240	sequence60:12230..12763(-)	partial			WP_010922065.1	hypothetical protein	62.7	53.1	34.8
MGA_2084	LOCUS_20250	sequence60:12892..13911(-)	partial			WP_000921892.1	phage portal protein	98.2	67.9	29.4
MGA_2098	LOCUS_20390	sequence60:19966..20391(-)	partial			WP_226319307.1	hypothetical protein	38.3	76.1	72.2
MGA_2099	LOCUS_20400	sequence60:20369..20731(-)	partial			WP_001080846.1	helix-turn-helix transcriptional regulator	68.3	56.7	63.4
MGA_2103	LOCUS_20440	sequence60:22347..23039(-)	partial			WP_012047604.1	ERF family protein	46.5	55.5	43.6
MGA_2110	LOCUS_20510	sequence60:24789..24959(-)	partial			WP_000656669.1	hypothetical protein	94.6	44.5	66.0
MGA_2128	LOCUS_20670	sequence61:786..1301(-)	frameshift		860	WP_140860145.1	IS3 family transposase	86.0	32.7	94.6
MGA_2135	LOCUS_20740	sequence62:4158..5114(+)	partial			WP_000771103.1	choline-binding protein CbpC	28.0	26.0	74.2
MGA_2155	LOCUS_20940	sequence63:18011..18976(+)	partial			WP_010933110.1	DUF3644 domain-containing protein	70.7	77.2	25.5
MGA_2159	LOCUS_20970	sequence63:22543..24714(+)	partial			WP_000751576.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	85.9	28.8	24.7
MGA_2160	LOCUS_20980	sequence63:24714..28583(+)	partial			WP_011836870.1	ZmpA/ZmpB/ZmpC family metallo-endopeptidase	54.1	23.1	32.6
MGA_2164	LOCUS_21020	sequence63:35531..35908(+)	frameshift		35887	WP_000610749.1	adenylosuccinate lyase	64.0	18.5	95.0
MGA_2165	LOCUS_21030	sequence63:35898..36122(+)	frameshift		35887	WP_012972422.1	adenylosuccinate lyase	87.8	15.1	90.8
MGA_2167	LOCUS_21050	sequence63:37267..44196(+)	partial			WP_000527121.1	YSIRK signal domain/LPXTG anchor domain surface protein	60.5	53.2	38.3
MGA_2169	LOCUS_21070	sequence65:168..953(+)	partial			WP_000608644.1	IS1380-like element ISEcp1 family transposase	55.2	36.0	29.1
MGA_2172	LOCUS_21100	sequence68:1..1011(+)	partial			WP_000671355.1	PavB family fibronectin-binding SSURE repeat adhesin	100.0	37.4	83.9
MGA_2179	LOCUS_21170	sequence68:5885..7129(+)	partial			WP_000725079.1	N-acetylmuramoyl-L-alanine amidase family protein	26.1	26.2	51.3
MGA_2183	LOCUS_21190	sequence70:1..838(+)	partial			WP_000468780.1	YSIRK signal domain/LPXTG anchor domain surface protein	82.4	18.7	26.0
MGA_2189	LOCUS_21250	sequence71:1015..1311(-)	frameshift		1017	WP_000732404.1	bacteriocin-associated integral membrane family protein	98.0	14.7	37.4
MGA_2211	LOCUS_21450	sequence73:8310..8522(-)	internal_stop_codon	8208..8210(-),8310..8312(-)		WP_000773447.1	ABC transporter permease	100.0	28.9	91.4
MGA_2212	LOCUS_21460	sequence73:8538..8660(-)	internal_stop_codon	8787..8789(-)		WP_000452052.1	ABC transporter ATP-binding protein	100.0	14.2	100.0
MGA_2213	LOCUS_21470	sequence73:8787..9383(-)	internal_stop_codon	8787..8789(-)		WP_000452052.1	ABC transporter ATP-binding protein	100.0	70.5	97.0
MGA_2218	LOCUS_21510	sequence75:7..>612(-)	partial			WP_068990772.1	IS66-like element short variant transposase	100.0	44.7	80.1
MGA_2219	LOCUS_21520	sequence76:1..502(+)	partial			WP_000110073.1	restriction endonuclease subunit S	89.2	26.4	45.9
MGA_2220	LOCUS_21530	sequence76:462..>993(-)	partial			WP_011123347.1	restriction endonuclease subunit S	90.9	39.9	34.8
MGA_2229	LOCUS_21610	sequence77:3670..4203(-)	partial			WP_000397492.1	hypothetical protein	55.9	39.1	35.4
MGA_2231	LOCUS_21630	sequence79:1..580(+)	partial			WP_000187233.1	restriction endonuclease subunit S	100.0	36.8	96.4
MGA_2234	LOCUS_21650	sequence80:30..530(+)	partial			WP_209611766.1	restriction endonuclease subunit S	94.6	42.0	40.1
MGA_2245	LOCUS_21720	sequence86:87..392(-)	partial			WP_120770310.1	ISL3 family transposase	42.6	10.3	81.4