# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_46	LOCUS_00460	sequence1:43514..44359(+)	partial			WP_010989483.1	hypothetical protein	84.3	69.6	24.1
MGA_48	LOCUS_00480	sequence1:44767..45228(+)	partial			WP_001166913.1	hypothetical protein	95.4	34.9	54.8
MGA_69	LOCUS_00690	sequence1:66194..66421(+)	internal_stop_codon	66419..66421(+)		WP_002893668.1	response regulator transcription factor	100.0	37.7	78.7
MGA_112	LOCUS_01120	sequence1:113134..113448(+)	partial			WP_002983650.1	DNA-directed RNA polymerase subunit omega	62.5	61.9	92.3
MGA_136	LOCUS_01360	sequence1:138513..138863(+)	internal_stop_codon	138861..138863(+)		WP_168747012.1	DNA cytosine methyltransferase	90.5	27.8	45.7
MGA_202	LOCUS_02020	sequence1:206182..206415(+)	partial			WP_002262696.1	hypothetical protein	66.2	63.0	70.6
MGA_217	LOCUS_02170	sequence1:220136..220516(+)	internal_stop_codon	220514..220516(+)		WP_011837280.1	ABC transporter ATP-binding protein	100.0	43.8	71.4
MGA_218	LOCUS_02180	sequence1:220520..221002(+)	internal_stop_codon	220514..220516(+)		WP_011837280.1	ABC transporter ATP-binding protein	100.0	55.6	61.9
MGA_228	LOCUS_02280	sequence1:228538..229110(+)	frameshift		228517	WP_002262444.1	RpiB/LacA/LacB family sugar-phosphate isomerase	92.1	83.3	61.7
MGA_232	LOCUS_02320	sequence1:230797..231393(+)	frameshift		231351	WP_002903178.1	GNAT family N-acetyltransferase	88.4	70.9	49.1
MGA_280	LOCUS_02800	sequence1:286189..287367(+)	partial			WP_002680450.1	TPM domain-containing protein	51.8	76.1	34.4
MGA_289	LOCUS_02890	sequence1:298364..298966(-)	frameshift,internal_stop_codon	298363..298365(-)	298989	WP_011836763.1	metallophosphoesterase	100.0	69.9	68.5
MGA_290	LOCUS_02900	sequence1:298978..299148(-)	frameshift		299013	WP_010905663.1	metallophosphoesterase	80.4	18.5	55.6
MGA_340	LOCUS_03400	sequence1:360080..360511(-)	partial			WP_003722868.1	YdcF family protein	94.4	39.0	49.6
MGA_344	LOCUS_03440	sequence1:363611..364294(+)	partial			WP_011837123.1	homoserine O-succinyltransferase	99.1	71.6	78.2
MGA_387	LOCUS_03870	sequence1:411893..412033(-)	partial			WP_002897213.1	SPJ_0845 family protein	67.4	68.9	90.3
MGA_435	LOCUS_04350	sequence1:457022..457450(-)	partial			WP_011836891.1	hypothetical protein	70.4	72.5	40.6
MGA_446	LOCUS_04460	sequence1:469507..474900(+)	partial			WP_207215633.1	MucBP domain-containing protein	44.8	70.0	37.2
MGA_460	LOCUS_04600	sequence1:485896..486183(+)	frameshift,internal_stop_codon	486181..486183(+)	486243	WP_000678300.1	pneumococcal-type histidine triad protein	100.0	11.7	44.7
MGA_461	LOCUS_04610	sequence1:486287..486463(+)	frameshift,internal_stop_codon	486461..486463(+),486181..486183(+)	486267	WP_012775274.1	pneumococcal-type histidine triad protein	62.1	4.3	70.3
MGA_462	LOCUS_04620	sequence1:486796..487779(+)	frameshift,internal_stop_codon	487778..487780(+)	486706	WP_012775274.1	pneumococcal-type histidine triad protein	98.8	37.8	64.5
MGA_463	LOCUS_04630	sequence1:487822..488361(+)	internal_stop_codon	487777..487779(+)		WP_012775274.1	pneumococcal-type histidine triad protein	39.7	9.7	51.8
MGA_480	LOCUS_04800	sequence1:508049..508183(+)	frameshift,internal_stop_codon	508287..508289(+)	508156	WP_011837075.1	DUF1697 domain-containing protein	81.8	19.9	86.1
MGA_481	LOCUS_04810	sequence1:508296..508589(+)	frameshift,internal_stop_codon	508287..508289(+)	508156	WP_011837075.1	DUF1697 domain-containing protein	94.8	50.8	72.8
MGA_509	LOCUS_05090	sequence1:535232..535558(-)	partial			WP_010968620.1	helix-turn-helix transcriptional regulator	63.9	76.4	40.6
MGA_538	LOCUS_05380	sequence1:562984..563157(+)	frameshift		563139	WP_002262590.1	VOC family protein	89.5	41.9	63.5
MGA_552	LOCUS_05520	sequence1:574754..574918(+)	frameshift		574900	WP_002284146.1	cell surface ecto-5'-nucleotidase Nt5e	72.2	5.3	61.5
MGA_594	LOCUS_05940	sequence1:622855..623049(-)	partial			WP_001830627.1	ABC transporter ATP-binding protein	93.8	24.9	53.2
MGA_601	LOCUS_06010	sequence1:629228..632005(-)	partial			WP_010946812.1	DUF927 domain-containing protein	22.8	39.0	22.0
MGA_646	LOCUS_06460	sequence1:673069..673245(-)	partial			WP_000048054.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_667	LOCUS_06670	sequence1:694811..695578(-)	partial			WP_001067278.1	AraC family transcriptional regulator	87.1	53.5	29.3
MGA_669	LOCUS_06690	sequence1:696490..697836(-)	partial			WP_010966092.1	glycoside hydrolase family 16 protein	41.7	76.8	60.5
MGA_686	LOCUS_06860	sequence1:717836..718399(-)	internal_stop_codon	717836..717838(-)		WP_011836679.1	DUF805 domain-containing protein	81.8	41.2	53.6
MGA_701	LOCUS_07010	sequence1:729570..729773(-)	frameshift		729581	WP_011461573.1	alpha/beta hydrolase	80.6	20.2	44.4
MGA_707	LOCUS_07070	sequence1:735500..736345(-)	partial			WP_002262027.1	flavocytochrome c	92.5	32.4	77.7
MGA_711	LOCUS_07110	sequence1:739111..739467(-)	partial			WP_000566988.1	GNAT family N-acetyltransferase	100.0	71.1	92.4
MGA_715	LOCUS_07150	sequence1:742699..743154(-)	partial			WP_010964318.1	ASCH domain-containing protein	75.5	71.3	43.0
MGA_723	LOCUS_07230	sequence1:748726..749166(-)	internal_stop_codon	749191..749193(-)		WP_011202637.1	carboxymuconolactone decarboxylase family protein	95.2	50.0	59.0
MGA_727	LOCUS_07270	sequence1:752618..753118(+)	partial			WP_017409206.1	DNA-binding transcriptional regulator OxyR	51.8	28.9	39.5
MGA_800	LOCUS_08000	sequence1:824491..824625(-)	partial			WP_011836809.1	GNAT family N-acetyltransferase	81.8	24.5	75.0
MGA_827	LOCUS_08270	sequence1:854778..854948(+)	partial			WP_002895160.1	DUF3042 family protein	71.4	71.4	90.0
MGA_838	LOCUS_08380	sequence1:864844..866241(-)	partial			WP_146623251.1	beta-glucoside-specific PTS transporter subunit IIABC	98.3	74.2	35.9
MGA_888	LOCUS_08880	sequence1:923443..924642(-)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	100.0	67.2	97.2
MGA_891	LOCUS_08910	sequence1:925880..927340(-)	partial			WP_011241757.1	MobQ family relaxase	53.1	37.6	42.1
MGA_897	LOCUS_08970	sequence1:932181..932393(-)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	95.7	11.3	100.0
MGA_900	LOCUS_09000	sequence1:933687..935147(-)	partial			WP_011241724.1	MobQ family relaxase	79.0	63.0	32.6
MGA_903	LOCUS_09030	sequence1:936306..936575(-)	frameshift		936610	WP_002681704.1	TfoX/Sxy family protein	100.0	84.0	77.5
MGA_907	LOCUS_09070	sequence1:939333..939671(-)	partial			WP_010247013.1	type IV secretory system conjugative DNA transfer family protein	98.2	18.5	90.0
MGA_932	LOCUS_09320	sequence1:963833..967279(-)	partial			WP_002900650.1	GBS Bsp-like repeat-containing protein	84.8	73.2	52.8
MGA_944	LOCUS_09440	sequence1:980156..980329(-)	partial			WP_004612621.1	TfoX/Sxy family protein	93.0	50.0	73.6
MGA_947	LOCUS_09470	sequence1:981597..981881(-)	internal_stop_codon	981885..981887(-)		WP_002263641.1	GrpB family protein	98.9	46.3	64.5
MGA_948	LOCUS_09480	sequence1:981885..982163(-)	internal_stop_codon	981885..981887(-)		WP_002263641.1	GrpB family protein	96.7	44.3	59.6
MGA_990	LOCUS_09900	sequence1:1030008..1030268(-)	partial			WP_000730279.1	DUF3169 family protein	93.0	32.8	55.0
MGA_992	LOCUS_09920	sequence1:1030511..1030738(-)	frameshift		1030760	WP_002900787.1	helix-turn-helix transcriptional regulator	92.0	63.9	81.2
MGA_1041	LOCUS_10410	sequence1:1078658..1079167(-)	frameshift,internal_stop_codon	1079195..1079197(-)	1078672	WP_011987086.1	TraX family protein	95.9	60.5	28.8
MGA_1054	LOCUS_10540	sequence1:1092141..1092479(-)	frameshift		1092556	WP_002900899.1	GyrI-like domain-containing protein	100.0	54.9	67.0
MGA_1055	LOCUS_10550	sequence1:1092473..1092745(-)	frameshift		1092556	WP_002900899.1	GyrI-like domain-containing protein	67.8	29.9	67.2
MGA_1064	LOCUS_10640	sequence1:1099429..1099812(-)	partial			WP_011837350.1	phosphatase PAP2 family protein	99.2	58.3	64.3
MGA_1077	LOCUS_10770	sequence2:9345..9782(+)	partial			WP_002917849.1	SP_0198 family lipoprotein	71.7	67.9	46.3
MGA_1093	LOCUS_10930	sequence2:25231..25776(+)	partial			WP_011963380.1	serine acetyltransferase	62.4	60.9	47.4
MGA_1101	LOCUS_11010	sequence2:33202..35751(+)	partial			WP_000671444.1	fibronectin-binding SSURE repeat adhesin PavB	88.1	64.2	55.2
MGA_1110	LOCUS_11100	sequence2:44002..44328(+)	internal_stop_codon	44326..44328(+)		WP_011836334.1	uridine kinase	95.4	48.6	67.0
MGA_1111	LOCUS_11110	sequence2:44386..44649(+)	internal_stop_codon	44326..44328(+)		WP_011836334.1	uridine kinase	94.3	38.7	59.8
MGA_1144	LOCUS_11440	sequence2:65307..69917(+)	frameshift,internal_stop_codon	69903..69905(+),69915..69917(+),69909..69911(+)	69896,69941	WP_011837563.1	Cna B-type domain-containing protein	52.6	49.3	32.9
MGA_1145	LOCUS_11450	sequence2:69996..70652(+)	frameshift,internal_stop_codon	69915..69917(+)	69914,69941	WP_011837563.1	Cna B-type domain-containing protein	84.4	11.8	40.0
MGA_1146	LOCUS_11460	sequence2:71033..71383(-)	partial			WP_002902079.1	hypothetical protein	100.0	71.6	44.0
MGA_1154	LOCUS_11540	sequence2:79537..79797(+)	partial			WP_002263364.1	zinc-dependent alcohol dehydrogenase family protein	96.5	23.8	72.3
MGA_1157	LOCUS_11570	sequence2:81534..82076(+)	frameshift		82010	WP_003548211.1	beta-glucoside-specific PTS transporter subunit IIABC	87.2	21.7	43.4
MGA_1158	LOCUS_11580	sequence2:82055..83386(+)	frameshift		82016	WP_011254503.1	glucose PTS transporter subunit IIA	99.8	79.1	58.2
MGA_1169	LOCUS_11690	sequence2:93981..94709(+)	partial			WP_002262417.1	hypothetical protein	40.9	76.9	73.0
MGA_1280	LOCUS_12800	sequence2:207718..208428(+)	frameshift,internal_stop_codon	207695..207697(+)	207538	WP_115283723.1	IS3 family transposase	99.2	52.0	83.8
MGA_1297	LOCUS_12970	sequence2:223523..224083(+)	frameshift,internal_stop_codon	224064..224066(+),223476..223478(+)	224021,223247	WP_102777394.1	IS3 family transposase	88.7	43.9	81.2
MGA_1312	LOCUS_13120	sequence2:242567..243007(-)	partial			WP_115276001.1	ISL3 family transposase	97.3	34.9	71.2
MGA_1398	LOCUS_13980	sequence2:336785..337861(+)	partial			WP_002365949.1	replication initiator protein A	61.2	60.1	28.1
MGA_1400	LOCUS_14000	sequence2:338134..338400(+)	partial			WP_001080846.1	helix-turn-helix transcriptional regulator	67.0	41.8	55.9
MGA_1403	LOCUS_14030	sequence2:341850..345629(+)	partial			WP_000167699.1	GbpC/Spa domain-containing protein	92.1	71.9	29.5
MGA_1439	LOCUS_14390	sequence2:383702..383995(+)	frameshift		383608,383719	WP_012048283.1	SulP family inorganic anion transporter	94.8	17.0	57.4
MGA_1448	LOCUS_14480	sequence3:4076..5497(+)	partial			WP_002358661.1	LPXTG cell wall anchor domain-containing protein	18.2	81.7	40.0
MGA_1449	LOCUS_14490	sequence3:5523..11531(+)	partial			WP_011836823.1	GbpC/Spa domain-containing protein	22.5	32.2	34.2
MGA_1459	LOCUS_14590	sequence3:20667..20927(-)	partial			WP_002359328.1	DUF3173 domain-containing protein	67.4	81.4	48.3
MGA_1500	LOCUS_15000	sequence3:68290..68994(+)	frameshift		68345	WP_012027102.1	permease	90.2	69.4	39.8
MGA_1503	LOCUS_15030	sequence3:70489..74934(+)	partial			WP_164691239.1	SpaA isopeptide-forming pilin-related protein	87.6	38.9	21.3
MGA_1524	LOCUS_15240	sequence3:95766..99746(+)	partial			WP_002900650.1	GBS Bsp-like repeat-containing protein	52.6	52.2	43.4
MGA_1536	LOCUS_15360	sequence3:112316..112807(+)	partial			WP_011836499.1	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	95.7	20.8	89.1
MGA_1538	LOCUS_15380	sequence3:113059..113736(+)	frameshift		113905,113730	WP_011836499.1	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	99.6	29.9	87.5
MGA_1539	LOCUS_15390	sequence3:114016..114357(+)	frameshift		113905,113730	WP_011836499.1	5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase	86.7	13.1	95.9
MGA_1541	LOCUS_15410	sequence3:115914..116786(+)	frameshift,internal_stop_codon	115821..115823(+)	116777	WP_009931832.1	glycoside hydrolase family 1 protein	100.0	59.5	62.5
MGA_1542	LOCUS_15420	sequence3:116755..117216(+)	frameshift		116777	WP_009931832.1	glycoside hydrolase family 1 protein	90.2	28.4	79.0
MGA_1589	LOCUS_15890	sequence4:31974..32282(+)	partial			WP_006268963.1	hypothetical protein	100.0	50.7	99.0
MGA_1594	LOCUS_15940	sequence4:35548..38418(-)	partial			WP_013399720.1	FIVAR domain-containing protein	91.5	33.6	22.8
MGA_1600	LOCUS_16000	sequence4:41470..42207(+)	partial			WP_010989677.1	FtsK/SpoIIIE domain-containing protein	71.0	39.5	30.3
MGA_1604	LOCUS_16040	sequence4:45649..46167(-)	frameshift		46258,46267	WP_012775361.1	membrane protein	75.0	23.4	27.2
MGA_1605	LOCUS_16050	sequence4:46172..46951(-)	partial			WP_002322202.1	hypothetical protein	84.6	38.7	37.8
MGA_1616	LOCUS_16160	sequence4:57420..58415(+)	partial			WP_011837698.1	DUF1700 domain-containing protein	27.8	44.7	54.3
MGA_1622	LOCUS_16220	sequence4:64097..64615(-)	partial			WP_012028596.1	thiol reductase thioredoxin	65.1	74.5	35.1
MGA_1624	LOCUS_16240	sequence4:65553..66296(+)	internal_stop_codon	65490..65492(+)		WP_011837644.1	Rgg/GadR/MutR family transcriptional regulator	94.3	83.3	42.4
MGA_1653	LOCUS_16530	sequence4:96084..96773(-)	partial			WP_011141042.1	triose-phosphate isomerase	65.9	63.8	30.0
MGA_1656	LOCUS_16560	sequence4:99905..101755(+)	partial			WP_011837728.1	YfhO family protein	99.7	71.3	64.2
MGA_1667	LOCUS_16660	sequence4:110394..110894(-)	partial			WP_001197951.1	YehR family lipoprotein	68.7	63.6	34.2
MGA_1756	LOCUS_17540	sequence5:79590..85496(+)	partial			WP_011068088.1	FctA domain-containing protein	51.4	43.1	32.5
MGA_1770	LOCUS_17680	sequence6:109..369(-)	partial			WP_011837350.1	phosphatase PAP2 family protein	94.2	37.5	64.2
MGA_1773	LOCUS_17710	sequence6:2239..3246(+)	internal_stop_codon	3244..3246(+)		WP_011837353.1	Trk system potassium transporter TrkA	99.1	73.9	78.0
MGA_1774	LOCUS_17720	sequence6:3295..3588(+)	internal_stop_codon	3244..3246(+)		WP_000691695.1	Trk system potassium transporter TrkA	100.0	21.6	78.4
MGA_1775	LOCUS_17730	sequence6:3592..4002(+)	frameshift		3822	WP_001043409.1	TrkH family potassium uptake protein	56.6	16.1	67.5
MGA_1776	LOCUS_17740	sequence6:4011..5033(+)	frameshift		3822	WP_011837354.1	TrkH family potassium uptake protein	100.0	71.0	76.5
MGA_1777	LOCUS_17750	sequence6:5418..5933(+)	internal_stop_codon	5931..5933(+)		WP_002263312.1	aminoacyltransferase	100.0	41.7	53.2
MGA_1778	LOCUS_17760	sequence6:6438..6653(+)	partial			WP_002919288.1	aminoacyltransferase	100.0	17.3	71.8
MGA_1810	LOCUS_18080	sequence6:33658..34254(+)	partial			WP_002263013.1	hypothetical protein	26.3	24.6	51.9
MGA_1833	LOCUS_18300	sequence9:29..754(-)	internal_stop_codon	887..889(-)		WP_055164393.1	IS30 family transposase	93.8	71.7	66.2
