{ "type": "genome", "identifier": "GCF_002091475.1", "organism": "Sphingomonas azotifigens NBRC 15497", "title": "Sphingomonas azotifigens NBRC 15497", "description": "na", "data type": "Genome sequencing and assembly", "organization": "National Institute of Technology and Evaluation", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002091475.1", "bioproject": "PRJNA224116", "biosample": "SAMD00046751", "wgs_master": "BCTR00000000.1", "refseq_category": "reference genome", "taxid": "1219041", "species_taxid": "330920", "organism_name": "Sphingomonas azotifigens NBRC 15497", "infraspecific_name": "strain=NBRC 15497", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/04/03", "asm_name": "ASM209147v1", "asm_submitter": "National Institute of Technology and Evaluation", "gbrs_paired_asm": "GCA_002091475.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/091/475/GCF_002091475.1_ASM209147v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5145744", "genome_size_ungapped": "5145744", "gc_percent": "67.500000", "replicon_count": "0", "scaffold_count": "163", "contig_count": "163", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002091475.1-RS_2024_08_12", "annotation_date": "2024-08-12", "total_gene_count": "4763", "protein_coding_gene_count": "4656", "non_coding_gene_count": "51", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-04-03", "dateModified": "2017-04-03", "datePublished": "2017-04-03", "_annotation": { "sample_count": 1, "sample_organism": [ "Sphingomonas azotifigens NBRC 15497" ], "sample_taxid": [ "1219041" ], "sample_host_organism": [], 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{ "organism_name": "Sphingomonas folli", "strain": "strain=RHCKR7", "accession": "GCA_019429525.1", "taxid": 2862497, "species_taxid": 2862497, "relation_to_type": "type", "validated": true, "ani": 79.5757, "matched_fragments": 636, "total_fragments": 1639, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas suaedae", "strain": "strain=XS-10", "accession": "GCA_007833215.1", "taxid": 2599297, "species_taxid": 2599297, "relation_to_type": "type", "validated": true, "ani": 79.445, "matched_fragments": 599, "total_fragments": 1639, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas corticis", "strain": "strain=36D10-4-7", "accession": "GCA_012035195.1", "taxid": 2722791, "species_taxid": 2722791, "relation_to_type": "type", "validated": true, "ani": 78.9149, "matched_fragments": 567, "total_fragments": 1639, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, 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