{
    "type": "genome",
    "identifier": "GCF_002094305.1",
    "organism": "Prescottella equi",
    "title": "Prescottella equi",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "The University of Edinburgh",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_002094305.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN04880536",
        "wgs_master": "LWTX00000000.1",
        "refseq_category": "na",
        "taxid": "43767",
        "species_taxid": "43767",
        "organism_name": "Prescottella equi",
        "infraspecific_name": "strain=DSM 20307",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/04/17",
        "asm_name": "ASM209430v1",
        "asm_submitter": "The University of Edinburgh",
        "gbrs_paired_asm": "GCA_002094305.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/094/305/GCF_002094305.1_ASM209430v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "5199710",
        "genome_size_ungapped": "5199710",
        "gc_percent": "69.000000",
        "replicon_count": "0",
        "scaffold_count": "37",
        "contig_count": "37",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)",
        "annotation_date": "2024-03-11",
        "total_gene_count": "4917",
        "protein_coding_gene_count": "4811",
        "non_coding_gene_count": "58",
        "pubmed_id": "27638249"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-04-17",
    "dateModified": "2017-04-17",
    "datePublished": "2017-04-17",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Prescottella equi"
        ],
        "sample_taxid": [
            "43767"
        ],
        "sample_host_organism": [
            "Equus caballus"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Sweden"
        ],
        "sample_host_location_id": [],
        "data_size": "1.409 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "5199710",
        "Number of Sequences": "37",
        "Longest Sequences (bp)": "1154308",
        "N50 (bp)": "393804",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "68.8",
        "Number of CDSs": "4912",
        "Average Protein Length": "321.3",
        "Coding Ratio (%)": "91.0",
        "Number of rRNAs": "1",
        "Number of tRNAs": "64",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Prescottella equi",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Prescottella equi",
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            },
            {
                "organism_name": "Prescottella equi",
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            {
                "organism_name": "Prescottella equi",
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            {
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "strain": "strain=Ca11",
                "accession": "GCA_000738775.1",
                "taxid": 1323361,
                "species_taxid": 1323361,
                "relation_to_type": "type",
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                "ani": 85.2505,
                "matched_fragments": 1240,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "accession": "GCA_004011825.1",
                "taxid": 2487364,
                "species_taxid": 2487364,
                "relation_to_type": "type",
                "validated": true,
                "ani": 82.0862,
                "matched_fragments": 876,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_001646645.1",
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                "matched_fragments": 1464,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Mycobacteriaceae;g__Rhodococcus",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.01",
                "min_intra_species_ani": "98.63",
                "mean_intra_species_af": "0.96",
                "min_intra_species_af": "0.88",
                "num_clustered_genomes": 61,
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            },
            {
                "accession": "GCF_003051005.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
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        "mesophilic_range_tmp": null,
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    },
    "_genome_taxon": [
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        "equi"
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}