# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_3	LOCUS_00020	sequence01:2088..2291(+)	partial			WP_003899418.1	helix-turn-helix domain-containing protein	91.0	70.9	52.5
MGA_15	LOCUS_00140	sequence01:9263..9628(+)	partial			WP_003898492.1	HNH endonuclease signature motif containing protein	78.5	19.1	57.3
MGA_19	LOCUS_00180	sequence01:13690..14115(-)	partial			WP_014877829.1	hypothetical protein	72.3	54.4	39.0
MGA_32	LOCUS_00310	sequence01:27532..28284(-)	partial			WP_003408099.1	alpha/beta hydrolase family protein	96.0	53.6	61.8
MGA_36	LOCUS_00350	sequence01:32415..32945(+)	partial			WP_011729330.1	translation initiation factor IF-3	86.9	74.3	90.2
MGA_43	LOCUS_00420	sequence01:36732..40853(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	7.1	17.0	35.6
MGA_118	LOCUS_01150	sequence03:50933..51193(+)	partial			WP_003406686.1	F0F1 ATP synthase subunit C	58.1	61.7	94.0
MGA_134	LOCUS_01310	sequence04:3774..4307(-)	partial			WP_003413352.1	membrane protein	59.9	68.8	68.9
MGA_142	LOCUS_01390	sequence04:13336..15444(-)	partial			WP_003413385.1	protein translocase subunit SecD	53.4	65.4	78.7
MGA_150	LOCUS_01460	sequence05:1..543(+)	partial			WP_010908871.1	RDD family protein	92.8	69.1	57.6
MGA_169	LOCUS_01640	sequence06:1..2715(+)	partial			WP_193484145.1	type I polyketide synthase	94.4	42.5	39.8
MGA_170	LOCUS_01650	sequence06:2737..10005(+)	partial			WP_011026868.1	type I polyketide synthase	35.5	38.4	49.5
MGA_180	LOCUS_01750	sequence06:18404..18772(-)	partial			WP_003409065.1	DUF732 domain-containing protein	59.8	67.6	49.3
MGA_201	LOCUS_01960	sequence06:43462..43893(-)	partial			WP_003900428.1	hypothetical protein	69.2	66.7	48.1
MGA_228	LOCUS_02210	sequence07:11050..11313(-)	partial			WP_029104374.1	hypothetical protein	71.3	83.8	75.8
MGA_292	LOCUS_02830	sequence09:42957..43517(+)	partial			WP_005088087.1	TetR/AcrR family transcriptional regulator	60.8	56.3	36.7
MGA_302	LOCUS_02930	sequence09:56960..57763(+)	partial			WP_003898602.1	oxygenase MpaB family protein	84.6	69.5	32.2
MGA_310	LOCUS_03010	sequence09:65957..67288(+)	partial			WP_011090968.1	phage/plasmid primase, P4 family	79.0	72.6	23.5
MGA_343	LOCUS_03340	sequence09:98330..98812(+)	partial			WP_003416878.1	acid phosphatase	94.4	74.4	64.9
MGA_353	LOCUS_03440	sequence09:105776..106141(-)	partial			WP_003409543.1	anti-sigma factor antagonist	86.8	73.4	48.6
MGA_354	LOCUS_03450	sequence09:106464..106637(-)	partial			WP_003855652.1	CsbD family protein	80.7	74.6	52.0
MGA_367	LOCUS_03580	sequence09:119240..119731(+)	partial			WP_013224372.1	cholesterol catabolism transcriptional regulator KstR	95.1	73.6	26.5
MGA_374	LOCUS_03630	sequence10:8914..9963(-)	partial			WP_003419325.1	fatty acid desaturase	83.1	41.3	51.7
MGA_395	LOCUS_03840	sequence10:29237..29638(+)	partial			WP_005056399.1	heme-binding protein	62.4	70.9	39.8
MGA_480	LOCUS_04690	sequence10:131329..131625(-)	partial			WP_005083510.1	flp pilus-assembly TadE/G-like family protein	80.6	61.2	40.5
MGA_481	LOCUS_04700	sequence10:131657..132004(-)	partial			WP_179948709.1	TadE family type IV pilus minor pilin	71.3	82.0	59.8
MGA_496	LOCUS_04850	sequence10:144855..145439(-)	partial			WP_011731103.1	TlpA disulfide reductase family protein	83.5	74.9	67.9
MGA_512	LOCUS_05010	sequence10:157637..158905(+)	frameshift,internal_stop_codon	157626..157628(+)	157649,157671	WP_003419768.1	membrane protein	78.4	75.8	48.0
MGA_519	LOCUS_05080	sequence10:164862..165593(-)	partial			WP_003854724.1	HNH endonuclease family protein	75.3	71.3	53.0
MGA_544	LOCUS_05330	sequence10:193850..194293(-)	partial			WP_005088410.1	AMP-binding protein	92.5	24.3	72.1
MGA_557	LOCUS_05460	sequence10:209166..209498(+)	partial			WP_003401357.1	uroporphyrinogen-III synthase	81.8	23.6	67.8
MGA_664	LOCUS_06500	sequence12:48049..48375(+)	partial			WP_003416932.1	Rv3235 family protein	99.1	49.8	48.6
MGA_683	LOCUS_06690	sequence12:74773..76356(+)	frameshift		76329	WP_019632285.1	adenylate/guanylate cyclase domain-containing protein	93.4	50.8	37.3
MGA_739	LOCUS_07250	sequence12:126751..126966(-)	partial			WP_011727890.1	CDGSH iron-sulfur domain-containing protein	63.4	64.8	73.9
MGA_744	LOCUS_07300	sequence12:130779..131705(-)	frameshift		130787	WP_013226110.1	HAD-IIIA family hydrolase	97.1	58.9	46.8
MGA_746	LOCUS_07320	sequence12:133086..133565(-)	partial			WP_011730517.1	MPT63 family protein	88.7	40.8	42.3
MGA_753	LOCUS_07390	sequence12:138815..139240(+)	partial			WP_011727905.1	STAS domain-containing protein	67.4	66.9	48.4
MGA_758	LOCUS_07440	sequence12:142079..142606(-)	frameshift		142610	WP_005111050.1	ornithine decarboxylase	100.0	35.9	63.4
MGA_759	LOCUS_07450	sequence12:142488..143426(-)	frameshift,internal_stop_codon	143427..143429(-)	142610	WP_011726793.1	arginine decarboxylase	87.2	56.1	73.9
MGA_763	LOCUS_07490	sequence12:145907..146443(-)	partial			WP_003406169.1	hemophore-related protein	42.7	69.1	57.9
MGA_771	LOCUS_07570	sequence12:153254..153565(-)	partial			WP_003417162.1	protein UsfY	96.1	72.3	49.5
MGA_795	LOCUS_07770	sequence14:12621..13859(+)	partial			WP_003400998.1	PE-PPE domain-containing protein	74.3	52.0	40.2
MGA_804	LOCUS_07860	sequence14:30060..30608(+)	partial			WP_003412695.1	hypothetical protein	95.6	73.9	40.4
MGA_927	LOCUS_09080	sequence15:111407..112654(-)	partial			WP_004193862.1	DNA recombination protein RmuC	87.7	74.7	57.6
MGA_935	LOCUS_09160	sequence15:117422..118438(-)	partial			WP_005112872.1	alpha/beta hydrolase fold domain-containing protein	66.0	65.1	40.0
MGA_937	LOCUS_09180	sequence15:119595..120545(-)	internal_stop_codon	119595..119597(-)		WP_013230180.1	SDR family oxidoreductase	93.7	52.8	40.3
MGA_946	LOCUS_09260	sequence16:3791..4219(-)	partial			WP_003409420.1	resuscitation-promoting factor RpfC	78.9	61.9	62.5
MGA_948	LOCUS_09280	sequence16:5863..6654(+)	frameshift		5645	WP_003416075.1	NDMA-dependent alcohol dehydrogenase	99.6	71.2	74.8
MGA_962	LOCUS_09420	sequence16:20550..21155(+)	partial			WP_011728767.1	shikimate kinase	83.1	68.4	76.6
MGA_993	LOCUS_09730	sequence16:51852..53198(-)	partial			WP_010950653.1	alpha/beta hydrolase	77.7	51.7	41.8
MGA_1079	LOCUS_10590	sequence17:267..1415(+)	partial			WP_003400998.1	PE-PPE domain-containing protein	94.8	63.1	32.6
MGA_1082	LOCUS_10620	sequence17:3551..4837(+)	partial			WP_011087566.1	glutaminase A	91.4	65.2	44.8
MGA_1121	LOCUS_11000	sequence17:51555..52109(-)	partial			WP_005094018.1	acyl-CoA synthetase	79.3	28.5	69.2
MGA_1155	LOCUS_11340	sequence17:91544..92341(+)	partial			WP_003407315.1	lipoarabinomannan carrier protein LprG	74.7	83.5	40.9
MGA_1167	LOCUS_11460	sequence17:105131..105910(+)	partial			WP_011728045.1	type VII secretion target	90.3	64.7	44.3
MGA_1189	LOCUS_11680	sequence17:130496..133597(+)	partial			WP_003899322.1	Rne/Rng family ribonuclease	61.2	66.2	74.7
MGA_1244	LOCUS_12230	sequence17:190503..190901(+)	partial			WP_003412293.1	resuscitation-promoting factor protein RpfD	84.1	70.1	52.3
MGA_1259	LOCUS_12380	sequence17:207306..207941(+)	partial			WP_174519618.1	DUF3060 domain-containing protein	45.0	39.3	47.4
MGA_1261	LOCUS_12400	sequence17:209608..213132(+)	frameshift		213267	WP_003899299.1	phenyloxazoline synthase MbtB	96.4	81.5	60.0
MGA_1266	LOCUS_12450	sequence17:219115..225705(+)	partial			WP_011729886.1	non-ribosomal peptide synthetase	70.9	84.7	59.7
MGA_1407	LOCUS_13850	sequence20:110112..110441(-)	partial			WP_003891979.1	DUF5994 family protein	93.6	62.9	38.2
MGA_1410	LOCUS_13880	sequence20:112327..113118(+)	partial			WP_013227111.1	LuxR C-terminal-related transcriptional regulator	26.6	20.6	55.7
MGA_1412	LOCUS_13900	sequence20:114034..115032(-)	partial			WP_011103368.1	oxygenase MpaB family protein	59.3	59.0	30.8
MGA_1428	LOCUS_14060	sequence20:128320..129294(-)	partial			WP_003900223.1	resuscitation-promoting factor protein RpfA	46.6	37.3	63.8
MGA_1442	LOCUS_14200	sequence20:139999..140274(+)	partial			WP_011730711.1	DUF2537 domain-containing protein	63.7	63.7	62.1
MGA_1452	LOCUS_14300	sequence20:150311..150808(+)	partial			WP_003404684.1	peptidoglycan-binding protein ArfA	90.3	49.7	31.9
MGA_1468	LOCUS_14460	sequence20:168217..170205(+)	partial			WP_013224715.1	hypothetical protein	52.7	81.1	25.0
MGA_1476	LOCUS_14540	sequence20:176692..177174(+)	partial			WP_013226322.1	MarR family winged helix-turn-helix transcriptional regulator	63.8	64.5	40.2
MGA_1524	LOCUS_15020	sequence20:231589..231828(+)	partial			WP_011726891.1	FAD-linked oxidase C-terminal domain-containing protein	87.3	11.3	61.4
MGA_1525	LOCUS_15030	sequence20:231877..232854(+)	partial			WP_003404801.1	fumarylacetoacetate hydrolase family protein	97.2	48.8	70.3
MGA_1526	LOCUS_15040	sequence20:232851..234962(-)	partial			WP_011727252.1	hypothetical protein	10.8	6.0	45.5
MGA_1527	LOCUS_15050	sequence20:235093..237204(-)	partial			WP_000391771.1	cellulase family glycosylhydrolase	32.1	43.3	24.0
MGA_1530	LOCUS_15080	sequence20:238560..239270(-)	partial			WP_003898656.1	DUF4873 domain-containing protein	66.1	48.0	43.1
MGA_1531	LOCUS_15090	sequence20:239267..240169(-)	partial			WP_011730613.1	diiron oxygenase	100.0	73.1	69.0
MGA_1540	LOCUS_15180	sequence20:249740..250003(-)	partial			WP_010907562.1	chorismate mutase	78.2	64.8	82.4
MGA_1563	LOCUS_15400	sequence21:11687..12766(-)	partial			WP_003901256.1	PPE family protein	57.9	31.5	39.4
MGA_1564	LOCUS_15410	sequence21:13058..14476(-)	partial			WP_003400998.1	PE-PPE domain-containing protein	63.6	47.1	35.9
MGA_1575	LOCUS_15520	sequence21:24566..25141(+)	internal_stop_codon	24506..24508(+)		WP_003905037.1	IS110 family transposase	100.0	33.5	77.5
MGA_1601	LOCUS_15780	sequence21:46415..48190(+)	partial			WP_012256222.1	ABC transporter ATP-binding protein	42.1	69.8	48.8
MGA_1609	LOCUS_15860	sequence21:58799..60295(-)	partial			WP_003901256.1	PPE family protein	91.0	68.1	39.3
MGA_1656	LOCUS_16330	sequence21:112464..113990(-)	partial			WP_164922023.1	adenylate/guanylate cyclase domain-containing protein	73.8	67.4	31.4
MGA_1671	LOCUS_16480	sequence21:129210..129506(+)	frameshift		129491	WP_012066685.1	D-threitol dehydrogenase	92.9	36.6	43.0
MGA_1672	LOCUS_16490	sequence21:129503..129946(+)	frameshift		129425,129492,129413	WP_011331279.1	SDR family oxidoreductase	98.0	55.2	47.3
MGA_1675	LOCUS_16520	sequence21:130925..131443(-)	partial			WP_003896963.1	hypothetical protein	82.6	68.3	68.3
MGA_1688	LOCUS_16650	sequence21:144746..145051(-)	partial			WP_003900059.1	WXG100 family type VII secretion target	72.3	73.0	76.7
MGA_1692	LOCUS_16690	sequence21:150355..151512(+)	partial			WP_010950890.1	type VII secretion system ESX-4 subunit EccD4	61.8	56.1	29.0
MGA_1694	LOCUS_16710	sequence21:152759..153856(-)	partial			WP_003418333.1	type VII secretion system ESX-4 subunit EccB4	60.0	49.8	43.2
MGA_1695	LOCUS_16720	sequence21:153957..154670(+)	partial			WP_003418336.1	cutinase family protein	81.0	73.3	64.1
MGA_1698	LOCUS_16750	sequence21:156220..156795(-)	partial			WP_011727719.1	50S ribosomal protein L17	63.9	61.3	90.2
MGA_1712	LOCUS_16890	sequence21:169292..169519(-)	frameshift		169546,169636,169694	WP_205421581.1	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	92.0	10.8	42.0
MGA_1720	LOCUS_16970	sequence21:175142..176173(-)	frameshift,internal_stop_codon	176170..176172(-)	176133	WP_013228884.1	alpha-ketoacid dehydrogenase subunit alpha/beta	90.1	46.6	54.4
MGA_1771	LOCUS_17480	sequence22:28886..29740(+)	partial			WP_013229059.1	NlpC/P60 family protein	41.2	40.8	33.3
MGA_1806	LOCUS_17830	sequence22:61539..61706(+)	partial			WP_234794028.1	transposase	94.5	41.6	76.9
MGA_1807	LOCUS_17840	sequence22:61889..62395(+)	partial			WP_011268497.1	hypothetical protein	42.9	74.8	51.2
MGA_1808	LOCUS_17850	sequence22:62509..62985(+)	partial			WP_013228700.1	nitroreductase family deazaflavin-dependent oxidoreductase	68.4	79.1	39.8
MGA_1813	LOCUS_17900	sequence22:65399..66418(-)	partial			WP_037392461.1	AraC family transcriptional regulator	49.9	51.5	32.0
MGA_1817	LOCUS_17940	sequence22:68103..69311(-)	partial			WP_005081446.1	oxygenase MpaB family protein	74.6	71.5	37.2
MGA_1821	LOCUS_17980	sequence22:71641..72108(+)	partial			WP_003894938.1	DUF732 domain-containing protein	56.8	77.9	68.2
MGA_1830	LOCUS_18070	sequence22:82873..83226(+)	partial			WP_011029650.1	DoxX family protein	69.2	59.6	44.4
MGA_1835	LOCUS_18120	sequence22:85340..85924(+)	partial			WP_011728927.1	RDD family protein	71.1	84.5	60.1
MGA_1841	LOCUS_18180	sequence22:89855..91603(-)	partial			WP_003902238.1	apolipoprotein N-acyltransferase	93.1	61.4	60.5
MGA_1844	LOCUS_18210	sequence22:93844..94167(+)	partial			WP_003410610.1	dienelactone hydrolase family protein	66.4	30.0	64.8
MGA_1852	LOCUS_18290	sequence22:99254..99973(-)	partial			WP_003895335.1	DUF4333 domain-containing protein	51.9	46.5	65.4
MGA_1861	LOCUS_18380	sequence22:109262..109408(-)	partial			WP_003413663.1	YnfA family protein	89.6	39.1	79.1
MGA_1865	LOCUS_18420	sequence22:112290..112754(+)	partial			WP_003898948.1	HdeD family acid-resistance protein	95.5	72.3	67.3
MGA_1866	LOCUS_18430	sequence22:112860..113411(+)	partial			WP_220096343.1	DUF4190 domain-containing protein	64.5	46.7	41.0
MGA_1877	LOCUS_18540	sequence22:123388..124422(-)	frameshift,internal_stop_codon	123378..123380(-)	123386,123534	WP_013229848.1	cell division protein DivIVA	83.1	65.6	21.8
MGA_1880	LOCUS_18570	sequence22:126600..127586(-)	partial			WP_010884002.1	alpha/beta hydrolase fold domain-containing protein	91.5	36.7	42.8
MGA_1915	LOCUS_18920	sequence22:161450..162028(-)	partial			WP_003407722.1	signal peptidase II	77.1	73.3	81.8
MGA_1918	LOCUS_18950	sequence22:164407..164748(-)	partial			WP_003409188.1	DUF732 domain-containing protein	77.9	73.7	53.4
MGA_1936	LOCUS_19130	sequence22:186761..187477(-)	partial			WP_012583273.1	nitroreductase family protein	31.5	45.8	33.8
MGA_1943	LOCUS_19200	sequence22:200724..>203768(-)	partial			WP_003899549.1	phthiocerol type I polyketide synthase PpsD	96.1	54.7	38.4
MGA_1973	LOCUS_19480	sequence24:25897..27675(-)	partial			WP_015775718.1	hypothetical protein	54.6	77.3	38.9
MGA_1974	LOCUS_19490	sequence24:27672..27986(-)	partial			WP_010950565.1	DUF2742 domain-containing protein	89.4	68.2	46.2
MGA_1979	LOCUS_19540	sequence24:30683..30928(-)	frameshift,internal_stop_codon	30591..30593(-)	30672,30742,30679	WP_003907556.1	integrase	59.3	46.2	79.2
MGA_1981	LOCUS_19560	sequence24:31561..33252(+)	partial			WP_003911742.1	alpha/beta hydrolase	62.3	54.7	26.7
MGA_1998	LOCUS_19730	sequence24:51520..51978(-)	partial			WP_003405293.1	septum formation initiator family protein	78.3	52.2	64.7
MGA_2003	LOCUS_19780	sequence24:55912..57426(+)	partial			WP_005098619.1	PPE family protein	31.7	31.4	60.0
MGA_2009	LOCUS_19840	sequence24:65247..65750(+)	partial			WP_024265836.1	DUF2235 domain-containing protein	31.1	11.5	59.6
MGA_2014	LOCUS_19890	sequence24:72250..72981(+)	frameshift		72600,72546	WP_011176649.1	glycosyltransferase	73.3	25.8	33.5
MGA_2017	LOCUS_19920	sequence24:75021..75932(-)	frameshift		75362,75278	WP_015909439.1	flagellar filament outer layer protein FlaA	97.4	33.9	32.3
MGA_2023	LOCUS_19980	sequence24:79653..80801(+)	partial			WP_003404782.1	serine/threonine protein kinase PknD	53.9	30.1	53.9
MGA_2025	LOCUS_20000	sequence24:81135..81851(-)	partial			WP_011143331.1	mannose-1-phosphate guanyltransferase	79.8	23.1	33.2
MGA_2046	LOCUS_20210	sequence24:105394..106869(-)	partial			WP_003901258.1	PPE family protein	60.5	69.9	42.9
MGA_2088	LOCUS_20630	sequence24:146134..146487(+)	partial			WP_010907580.1	zinc ribbon domain-containing protein	50.4	59.6	83.1
MGA_2090	LOCUS_20650	sequence24:147213..147653(-)	partial			WP_013230043.1	large-conductance mechanosensitive channel protein MscL	70.5	73.9	48.5
MGA_2108	LOCUS_20830	sequence24:166511..167905(+)	partial			WP_010950653.1	alpha/beta hydrolase	43.3	32.2	34.0
MGA_2131	LOCUS_21050	sequence25:5109..6698(+)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	33.8	34.9	64.2
MGA_2154	LOCUS_21260	sequence26:11394..11888(+)	partial			WP_003412264.1	Low molecular weight antigen MTB12	58.5	57.7	55.7
MGA_2180	LOCUS_21520	sequence26:34743..35438(+)	partial			WP_003411129.1	phosphoribosyltransferase family protein	99.6	64.8	61.9
MGA_2181	LOCUS_21530	sequence26:35435..35806(-)	partial			WP_011729649.1	hypothetical protein	86.2	66.3	40.2
MGA_2187	LOCUS_21590	sequence26:40388..41440(-)	partial			WP_003411157.1	cell division protein FtsQ	68.6	77.4	71.6
MGA_2221	LOCUS_21930	sequence27:12396..13172(+)	partial			WP_011730075.1	membrane protein	78.7	70.0	40.0
MGA_2304	LOCUS_22760	sequence27:94223..94579(+)	partial			WP_003404135.1	DUF3073 domain-containing protein	30.5	60.0	86.1
MGA_2315	LOCUS_22870	sequence27:104156..105835(+)	partial			WP_010967670.1	nitric oxide reductase activation protein NorD	53.1	47.2	35.5
MGA_2332	LOCUS_23040	sequence27:121233..122741(-)	partial			WP_015920568.1	aromatic/alkene/methane monooxygenase hydroxylase/oxygenase subunit alpha	79.3	72.8	25.6
MGA_2333	LOCUS_23050	sequence27:123092..123610(+)	partial			WP_011143585.1	MarR family transcriptional regulator	91.9	72.1	31.2
MGA_2352	LOCUS_23240	sequence27:143802..144425(-)	partial			WP_003412695.1	hypothetical protein	80.2	71.0	34.3
MGA_2366	LOCUS_23360	sequence28:11334..11825(-)	partial			WP_003899112.1	CAP domain-containing protein	86.5	62.4	66.7
MGA_2378	LOCUS_23480	sequence28:23006..23641(-)	partial			WP_011729718.1	NAD(P)/FAD-dependent oxidoreductase	97.2	39.6	54.1
MGA_2413	LOCUS_23830	sequence28:59679..61181(-)	frameshift		59666,59684	WP_003899240.1	Hsp70 family protein	65.6	56.6	53.1
MGA_2424	LOCUS_23940	sequence28:74025..75803(+)	partial			WP_010886110.1	serine/threonine protein kinase PknH	50.2	48.1	51.2
MGA_2425	LOCUS_23950	sequence28:76138..76809(+)	frameshift,internal_stop_codon	75980..75982(+),76808..76810(+),75920..75922(+),75986..75988(+),76807..76809(+)	76579,76198,76812,76122,76591,76112,75991,76634	WP_005097886.1	MPT63 family protein	97.8	63.2	39.5
MGA_2457	LOCUS_24270	sequence28:111172..111558(+)	partial			WP_003895832.1	hypothetical protein	70.3	83.0	51.6
MGA_2491	LOCUS_24580	sequence30:20371..21060(-)	partial			WP_003399745.1	TMEM165/GDT1 family protein	83.8	63.9	59.6
MGA_2498	LOCUS_24650	sequence30:25825..26754(-)	partial			WP_235624060.1	LCP family protein	91.6	66.1	64.3
MGA_2516	LOCUS_24830	sequence30:42661..43473(-)	partial			WP_003420801.1	exported repetitive protein	24.8	26.1	62.2
MGA_2529	LOCUS_24960	sequence30:63873..66170(-)	partial			WP_003905192.1	DUF5632 domain-containing protein	28.4	74.4	51.4
MGA_2531	LOCUS_24980	sequence30:67348..67824(-)	partial			WP_010950962.1	hypothetical protein	71.5	76.5	40.3
MGA_2533	LOCUS_25000	sequence30:68800..69168(-)	partial			WP_010950962.1	hypothetical protein	58.2	47.0	54.9
MGA_2540	LOCUS_25070	sequence30:73184..74629(-)	partial			WP_015776917.1	alkaline phosphatase family protein	46.8	76.0	29.3
MGA_2596	LOCUS_25630	sequence30:126500..127222(+)	partial			WP_045843938.1	hypothetical protein	62.5	66.7	65.3
MGA_2611	LOCUS_25780	sequence30:141144..143057(+)	partial			WP_003414155.1	alpha/beta hydrolase family protein	47.6	51.1	39.7
MGA_2619	LOCUS_25860	sequence30:150148..150717(+)	partial			WP_005063732.1	DUF305 domain-containing protein	75.7	68.9	41.0
MGA_2622	LOCUS_25890	sequence30:152458..153606(+)	partial			WP_003908487.1	Ig-like domain-containing protein	72.3	76.7	76.8
MGA_2631	LOCUS_25980	sequence30:163720..>164256(-)	partial			WP_011726778.1	MMPL family transporter	89.3	21.3	32.5
MGA_2642	LOCUS_26090	sequence31:8725..9447(+)	frameshift		8620,8725	WP_209912946.1	IS481 family transposase	92.5	55.4	70.7
MGA_2656	LOCUS_26230	sequence31:23255..24166(-)	partial			WP_011726605.1	DUF3566 domain-containing protein	49.8	65.4	62.4
MGA_2665	LOCUS_26320	sequence31:35157..35471(+)	partial			WP_011731645.1	membrane protein insertion efficiency factor YidD	72.1	65.2	80.0
MGA_2666	LOCUS_26330	sequence31:35452..36540(+)	partial			WP_011731644.1	membrane protein insertase YidC	74.3	73.3	82.2
MGA_2675	LOCUS_26420	sequence31:43770..44279(-)	partial			WP_003400148.1	anti-sigma-M factor RsmA	98.2	66.5	43.3
MGA_2690	LOCUS_26570	sequence31:62265..62777(-)	partial			WP_003400476.1	MarR family transcriptional regulator	87.1	70.7	72.3
MGA_2698	LOCUS_26650	sequence31:69926..70330(+)	partial			WP_011731617.1	DUF5318 family protein	87.3	72.2	88.9
MGA_2715	LOCUS_26820	sequence31:97055..97936(-)	frameshift		97153	WP_011119453.1	Na+/H+ antiporter NhaA	73.4	49.5	44.5
MGA_2716	LOCUS_26830	sequence31:98087..98476(-)	frameshift		98489,98499	WP_003413686.1	ACR3 family arsenite efflux transporter	97.7	25.3	77.8
MGA_2728	LOCUS_26950	sequence31:111856..112833(-)	partial			WP_003400998.1	PE-PPE domain-containing protein	85.8	43.7	27.7
MGA_2735	LOCUS_27020	sequence31:119507..120490(-)	partial			WP_003407378.1	esterase PE16	71.9	45.3	28.9
MGA_2741	LOCUS_27080	sequence31:126429..127406(+)	partial			WP_010950605.1	PPE family protein	66.5	32.4	30.0
MGA_2744	LOCUS_27110	sequence31:130594..131157(-)	partial			WP_003974031.1	TetR family transcriptional regulator	76.5	66.7	40.4
MGA_2751	LOCUS_27160	sequence32:1477..10194(+)	partial			WP_010950546.1	PE family protein	16.7	52.5	20.2
MGA_2755	LOCUS_27200	sequence32:15153..19379(+)	frameshift		15833,15900	WP_011727252.1	hypothetical protein	18.9	19.5	24.8
MGA_2779	LOCUS_27440	sequence32:62295..62444(-)	partial			WP_011730739.1	hypothetical protein	93.9	74.2	78.3
MGA_2805	LOCUS_27700	sequence32:83441..84043(-)	partial			WP_005061338.1	DUF4333 domain-containing protein	63.5	52.8	44.9
MGA_2811	LOCUS_27760	sequence32:90017..90151(-)	partial			WP_015776783.1	hypothetical protein	90.9	74.1	65.0
MGA_2820	LOCUS_27850	sequence32:98782..99165(-)	partial			WP_010950435.1	DUF4226 domain-containing protein	90.6	41.5	39.3
MGA_2821	LOCUS_27860	sequence32:99196..99912(-)	partial			WP_003420421.1	lipid uptake coordinator LucA	68.1	63.8	54.9
MGA_2853	LOCUS_28170	sequence33:5606..7375(+)	partial			WP_011729702.1	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	54.8	55.2	79.9
MGA_2873	LOCUS_28340	sequence35:10598..10789(+)	partial			WP_003419208.1	gamma carbonic anhydrase family protein	44.4	16.1	75.0
MGA_2904	LOCUS_28650	sequence35:43452..44117(+)	partial			WP_014878484.1	hypothetical protein	66.5	63.9	61.1
MGA_2959	LOCUS_29180	sequence36:20591..21091(+)	partial			WP_003412264.1	Low molecular weight antigen MTB12	72.3	69.0	32.5
MGA_2963	LOCUS_29220	sequence36:26351..27523(+)	partial			WP_011123362.1	restriction endonuclease subunit S	52.3	50.9	39.2
MGA_2965	LOCUS_29240	sequence36:30465..30806(+)	partial			WP_011038030.1	SprT family zinc-dependent metalloprotease	53.1	24.2	46.7
MGA_2978	LOCUS_29370	sequence36:37915..39366(+)	frameshift,internal_stop_codon	37879..37881(+)	37793,37851,37950	WP_011727115.1	hypothetical protein	72.7	59.8	41.9
MGA_2979	LOCUS_29380	sequence36:39432..41162(+)	frameshift,internal_stop_codon	41192..41194(+)	41106,41164,41263	WP_011727115.1	hypothetical protein	61.8	58.7	43.3
MGA_3009	LOCUS_29680	sequence36:70317..71564(+)	partial			WP_010950639.1	PecA family PE domain-processing aspartic protease	74.2	53.2	40.8
MGA_3054	LOCUS_30130	sequence36:115758..116228(-)	partial			WP_011727213.1	NAD(P)/FAD-dependent oxidoreductase	78.2	33.8	55.1
MGA_3060	LOCUS_30190	sequence36:123132..123326(+)	partial			WP_003407710.1	Rv1535 family protein	79.7	65.4	49.0
MGA_3115	LOCUS_30740	sequence36:179582..179983(+)	partial			WP_003402344.1	DUF2599 domain-containing protein	77.4	69.6	59.2
MGA_3123	LOCUS_30820	sequence36:186195..186515(+)	partial			WP_003973252.1	rhodanese-like domain-containing protein	94.3	69.7	41.2
MGA_3124	LOCUS_30830	sequence36:186553..187326(-)	partial			WP_003898475.1	DUF2993 domain-containing protein	90.7	65.2	48.9
MGA_3139	LOCUS_30980	sequence36:200994..208121(+)	partial			WP_011142823.1	type I polyketide synthase	37.3	73.5	52.5
MGA_3140	LOCUS_30990	sequence36:208118..213538(+)	partial			WP_011205656.1	non-ribosomal peptide synthetase	58.0	32.4	41.6
MGA_3147	LOCUS_31060	sequence36:220498..223029(-)	partial			WP_048064397.1	ABC transporter permease	34.4	79.7	23.1
MGA_3155	LOCUS_31140	sequence36:229786..229944(+)	partial			WP_003402437.1	DNA-binding protein	100.0	66.7	94.2
MGA_3167	LOCUS_31260	sequence36:240502..242697(-)	partial			WP_013224247.1	cellulase family glycosylhydrolase	35.6	48.7	28.3
MGA_3174	LOCUS_31330	sequence36:248846..250276(+)	partial			WP_003405368.1	PPE family protein	69.7	84.9	34.5
MGA_3204	LOCUS_31630	sequence36:278207..278620(-)	frameshift,internal_stop_codon	278623..278625(-)	278592	WP_003419293.1	3-oxo-23,24-bisnorchol-4,17(20)-dien-22-oyl-CoA hydratase subunit alpha ChsH2	83.9	36.7	47.8
MGA_3205	LOCUS_31640	sequence36:278623..279171(-)	frameshift,internal_stop_codon	278623..278625(-)	278598	WP_013224382.1	OB-fold domain-containing protein	84.6	48.7	40.3
MGA_3229	LOCUS_31880	sequence36:305498..306946(-)	partial			WP_013228957.1	AMP-binding protein	90.9	43.9	37.2
MGA_3235	LOCUS_31940	sequence36:312264..312701(+)	partial			WP_011227837.1	enoyl-CoA hydratase-related protein	97.2	55.5	43.3
MGA_3257	LOCUS_32160	sequence36:334628..336280(+)	partial			WP_003900169.1	hypothetical protein	50.2	62.0	33.3
MGA_3290	LOCUS_32490	sequence36:365522..366877(+)	partial			WP_005079778.1	MCE family protein	81.6	72.2	48.2
MGA_3314	LOCUS_32730	sequence36:390696..392075(+)	partial			WP_011085728.1	phosphotransferase family protein	59.0	84.8	28.0
MGA_3316	LOCUS_32750	sequence36:394290..394703(-)	partial			WP_011730106.1	OB-fold domain-containing protein	100.0	24.5	40.6
MGA_3317	LOCUS_32760	sequence36:394748..395893(+)	partial			WP_011730106.1	OB-fold domain-containing protein	96.9	68.2	41.7
MGA_3324	LOCUS_32830	sequence36:402457..402717(+)	partial			WP_013228958.1	hypothetical protein	75.6	61.2	49.2
MGA_3338	LOCUS_32970	sequence36:415763..417040(-)	partial			WP_010950435.1	DUF4226 domain-containing protein	27.1	40.8	48.7
MGA_3358	LOCUS_33170	sequence36:436838..437140(-)	partial			WP_003403731.1	sigma-70 family RNA polymerase sigma factor SigL	90.0	50.8	46.7
MGA_3392	LOCUS_33510	sequence37:12461..13534(-)	partial			WP_003899065.1	hypothetical protein	76.2	72.9	30.3
MGA_3398	LOCUS_33570	sequence37:18836..19060(+)	partial			WP_003895017.1	(2Fe-2S)-binding protein	71.6	76.8	58.5
MGA_3415	LOCUS_33740	sequence37:37902..38744(-)	partial			WP_003409337.1	adhesin Apa	66.8	57.8	71.6
MGA_3501	LOCUS_34580	sequence40:32226..32891(-)	frameshift		32485,32914,33149	WP_076611786.1	IS3-like element ISMsm7 family transposase	66.5	37.3	32.4
MGA_3502	LOCUS_34590	sequence40:32888..33082(-)	frameshift		33152,32913,32920	WP_225580817.1	IS3 family transposase	84.4	14.0	42.6
MGA_3505	LOCUS_34620	sequence40:34479..36155(-)	partial			WP_003911742.1	alpha/beta hydrolase	68.6	59.6	27.4
MGA_3508	LOCUS_34650	sequence40:37381..38676(-)	partial			WP_003405629.1	hypothetical protein	31.8	35.9	34.3
MGA_3521	LOCUS_34780	sequence40:54024..54452(-)	partial			WP_005074775.1	DUF6319 family protein	57.0	71.1	58.0
MGA_3523	LOCUS_34800	sequence40:55338..55628(-)	partial			WP_011727903.1	DNA topoisomerase IB	92.7	26.3	48.3
MGA_3536	LOCUS_34930	sequence40:66232..68010(-)	partial			WP_011015416.1	cytochrome b/b6 domain-containing protein	53.2	48.2	39.3
MGA_3541	LOCUS_34970	sequence41:1..702(+)	partial			WP_003906341.1	HNH endonuclease signature motif containing protein	100.0	46.9	63.6
MGA_3550	LOCUS_35060	sequence41:9239..9523(+)	partial			WP_011726759.1	adenylate/guanylate cyclase domain-containing protein	58.5	5.2	54.5
MGA_3567	LOCUS_35230	sequence41:25858..26559(-)	frameshift		26573	WP_003898734.1	hypothetical protein	98.3	80.1	76.4
MGA_3584	LOCUS_35400	sequence41:43947..44306(-)	frameshift		44337	WP_003896200.1	mycofactocin-coupled SDR family oxidoreductase	76.5	30.0	57.1
MGA_3598	LOCUS_35540	sequence41:55021..55545(-)	frameshift,internal_stop_codon	55551..55553(-)	55544	WP_009936776.1	DUF1697 domain-containing protein	97.1	82.2	62.9
MGA_3636	LOCUS_35920	sequence41:94178..94489(+)	partial			WP_010908107.1	DivIVA domain-containing protein	75.7	68.4	71.8
MGA_3641	LOCUS_35970	sequence41:97986..99368(-)	partial			WP_014876908.1	DUF2599 domain-containing protein	23.0	77.4	51.9
MGA_3663	LOCUS_36170	sequence42:4895..8230(+)	partial			WP_010886098.1	PecA family PE domain-processing aspartic protease	24.8	28.7	51.8
MGA_3666	LOCUS_36200	sequence42:10251..11510(+)	partial			WP_003911094.1	PE-PPE domain-containing protein	73.0	63.7	34.6
MGA_3675	LOCUS_36290	sequence42:21359..24043(+)	partial			WP_012296639.1	translation initiation factor IF-2	69.7	68.3	93.4
MGA_3723	LOCUS_36760	sequence43:20030..21529(+)	partial			WP_011338147.1	VWA domain-containing protein	55.1	45.4	31.8
MGA_3765	LOCUS_37180	sequence43:62794..63039(-)	partial			WP_162177797.1	SDR family oxidoreductase	86.4	28.0	42.9
MGA_3788	LOCUS_37410	sequence43:84239..84847(+)	partial			WP_011727673.1	50S ribosomal protein L22	61.4	81.0	72.6
MGA_3792	LOCUS_37450	sequence43:86351..86668(+)	partial			WP_003898560.1	30S ribosomal protein S17	94.3	74.1	89.0
MGA_3802	LOCUS_37550	sequence43:93149..93844(+)	partial			WP_003403680.1	30S ribosomal protein S5	74.5	78.2	88.4
MGA_3816	LOCUS_37690	sequence43:106018..106563(+)	partial			WP_011727700.1	haloacid dehalogenase	77.3	55.1	42.1
MGA_3836	LOCUS_37890	sequence44:17116..17637(-)	partial			WP_172591949.1	L,D-transpeptidase	100.0	65.7	65.9
MGA_3873	LOCUS_38260	sequence44:56774..58159(-)	partial			WP_003400998.1	PE-PPE domain-containing protein	85.5	65.6	40.5
MGA_3877	LOCUS_38300	sequence44:60853..61884(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	87.2	49.3	42.0
MGA_3878	LOCUS_38310	sequence44:62012..63085(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	81.5	49.3	46.0
MGA_3886	LOCUS_38390	sequence44:69538..70548(-)	partial			WP_013222574.1	LLM class flavin-dependent oxidoreductase	53.9	53.1	29.6
MGA_3904	LOCUS_38570	sequence44:90195..92621(+)	partial			WP_011727252.1	hypothetical protein	10.1	6.6	39.3
MGA_3905	LOCUS_38580	sequence44:92664..95015(+)	partial			WP_011727252.1	hypothetical protein	10.5	7.0	39.3
MGA_3908	LOCUS_38610	sequence44:98023..98583(+)	partial			WP_171463838.1	TetR/AcrR family transcriptional regulator	73.7	67.1	35.7
MGA_3956	LOCUS_39090	sequence44:143783..144469(+)	frameshift		144457	WP_003415107.1	DNA-binding protein HupB	47.8	50.9	82.6
MGA_3996	LOCUS_39490	sequence44:185461..186729(+)	partial			WP_003901256.1	PPE family protein	73.5	47.0	43.0
MGA_4000	LOCUS_39530	sequence44:190387..191298(+)	partial			WP_003893793.1	[protein-PII] uridylyltransferase	98.7	36.3	54.5
MGA_4007	LOCUS_39600	sequence44:198820..199311(+)	partial			WP_003414731.1	30S ribosomal protein S16	65.6	66.0	87.9
MGA_4024	LOCUS_39770	sequence44:212158..212652(-)	partial			WP_003414678.1	M23 family metallopeptidase	93.3	61.4	71.2
MGA_4068	LOCUS_40210	sequence44:259484..259720(+)	frameshift		259693	WP_003414510.1	YlxR family protein	84.6	66.7	69.7
MGA_4078	LOCUS_40270	sequence47:1..1055(+)	partial			WP_003400012.1	type VII secretion system ESX-2 serine protease mycosin MycP2	90.0	57.5	76.6
MGA_4082	LOCUS_40310	sequence47:4895..6151(-)	partial			WP_010950329.1	DUF5631 domain-containing protein	48.6	54.8	55.7
MGA_4092	LOCUS_40400	sequence48:4851..>7772(-)	partial			WP_010908856.1	type I polyketide synthase	99.9	54.0	44.7