{
    "type": "genome",
    "identifier": "GCF_002111595.1",
    "organism": "Lonsdalea britannica",
    "title": "Lonsdalea britannica",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Research Institute of Forest Ecology Environment and Protection",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_002111595.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN04363613",
        "wgs_master": "LUTN00000000.1",
        "refseq_category": "na",
        "taxid": "1082704",
        "species_taxid": "1082704",
        "organism_name": "Lonsdalea britannica",
        "infraspecific_name": "strain=LMG 26267",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/04/27",
        "asm_name": "ASM211159v1",
        "asm_submitter": "Research Institute of Forest Ecology Environment and Protection",
        "gbrs_paired_asm": "GCA_002111595.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/111/595/GCF_002111595.1_ASM211159v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3882080",
        "genome_size_ungapped": "3882080",
        "gc_percent": "55.000000",
        "replicon_count": "0",
        "scaffold_count": "57",
        "contig_count": "57",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_002111595.1-RS_2024_12_23",
        "annotation_date": "2024-12-23",
        "total_gene_count": "3584",
        "protein_coding_gene_count": "3051",
        "non_coding_gene_count": "75",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-04-27",
    "dateModified": "2017-04-27",
    "datePublished": "2017-04-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Lonsdalea britannica"
        ],
        "sample_taxid": [
            "1082704"
        ],
        "sample_host_organism": [
            "Quercus robur"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom"
        ],
        "sample_host_location_id": [],
        "data_size": "1.107 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3882080",
        "Number of Sequences": "57",
        "Longest Sequences (bp)": "331568",
        "N50 (bp)": "150496",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "55.1",
        "Number of CDSs": "3822",
        "Average Protein Length": "283.1",
        "Coding Ratio (%)": "83.6",
        "Number of rRNAs": "2",
        "Number of tRNAs": "64",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Lonsdalea britannica",
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1267,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Lonsdalea iberica",
                "strain": "strain=LMG 26264",
                "accession": "GCA_002111585.1",
                "taxid": 1082703,
                "species_taxid": 1082703,
                "relation_to_type": "type",
                "validated": true,
                "ani": 89.8088,
                "matched_fragments": 1078,
                "total_fragments": 1269,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lonsdalea quercina",
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                "accession": "GCA_900107885.1",
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                "validated": true,
                "ani": 89.0126,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Lonsdalea quercina subsp. quercina",
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                "accession": "GCA_000688655.1",
                "taxid": 1082705,
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                "relation_to_type": "type",
                "validated": true,
                "ani": 88.9773,
                "matched_fragments": 1113,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dickeya fangzhongdai",
                "strain": "strain=CGMCC 1.15464",
                "accession": "GCA_014642955.1",
                "taxid": 1778540,
                "species_taxid": 1778540,
                "relation_to_type": "type",
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                "ani": 79.8456,
                "matched_fragments": 581,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dickeya dadantii subsp. dieffenbachiae",
                "strain": "strain=NCPPB 2976",
                "accession": "GCA_000406185.1",
                "taxid": 204040,
                "species_taxid": 204038,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.7096,
                "matched_fragments": 573,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Dickeya parazeae",
                "strain": "strain=S31",
                "accession": "GCA_017897605.1",
                "taxid": 2893572,
                "species_taxid": 2893572,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.2957,
                "matched_fragments": 453,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pectobacterium colocasium",
                "strain": "strain=LJ1",
                "accession": "GCA_020181655.1",
                "taxid": 2878098,
                "species_taxid": 2878098,
                "relation_to_type": "type",
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                "matched_fragments": 429,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brenneria roseae subsp. roseae",
                "strain": "strain=LMG 27714",
                "accession": "GCA_003115845.1",
                "taxid": 1508506,
                "species_taxid": 1509241,
                "relation_to_type": "type",
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                "ani": 79.0582,
                "matched_fragments": 439,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Serratia bockelmannii",
                "strain": "strain=S3",
                "accession": "GCA_008011855.1",
                "taxid": 2703793,
                "species_taxid": 2703793,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.9165,
                "matched_fragments": 423,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Serratia entomophila",
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                "accession": "GCA_021462285.1",
                "taxid": 42906,
                "species_taxid": 42906,
                "relation_to_type": "type",
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                "ani": 78.8642,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Serratia nevei",
                "strain": "strain=S15",
                "accession": "GCA_008364245.1",
                "taxid": 2703794,
                "species_taxid": 2703794,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.7628,
                "matched_fragments": 452,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cronobacter muytjensii",
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                "accession": "GCA_000409285.1",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Cronobacter sakazakii",
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                "accession": "GCA_001971035.1",
                "taxid": 28141,
                "species_taxid": 28141,
                "relation_to_type": "type",
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        ],
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                "accession": "GCF_002111595.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Enterobacteriaceae;g__Lonsdalea",
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            },
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                "accession": "GCF_000688695.1",
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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        "britannica"
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    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}