{ "type": "genome", "identifier": "GCF_002116905.1", "organism": "Piscinibacter gummiphilus", "title": "Piscinibacter gummiphilus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Nagaoka University of Technology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002116905.1", "bioproject": "PRJNA224116", "biosample": "SAMN04621830", "wgs_master": "na", "refseq_category": "na", "taxid": "946333", "species_taxid": "946333", "organism_name": "Piscinibacter gummiphilus", "infraspecific_name": "strain=NS21", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/05/02", "asm_name": "ASM211690v1", "asm_submitter": "Nagaoka University of Technology", "gbrs_paired_asm": "GCA_002116905.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/116/905/GCF_002116905.1_ASM211690v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6398096", "genome_size_ungapped": "6398096", "gc_percent": "69.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002116905.1-RS_2024_12_16", "annotation_date": "2024-12-16", "total_gene_count": "5954", "protein_coding_gene_count": "5862", "non_coding_gene_count": "71", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-05-02", "dateModified": "2017-05-02", "datePublished": "2017-05-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Piscinibacter gummiphilus" ], "sample_taxid": [ "946333" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Japan" ], 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"strain": "strain=JA2", "accession": "GCA_000420125.1", "taxid": 316997, "species_taxid": 316997, "relation_to_type": "type", "validated": true, "ani": 79.8154, "matched_fragments": 710, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphaerotilus sulfidivorans", "strain": "strain=D-501", "accession": "GCA_013426975.1", "taxid": 639200, "species_taxid": 639200, "relation_to_type": "type", "validated": true, "ani": 79.7104, "matched_fragments": 680, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ideonella dechloratans", "strain": "strain=CCUG 30977", "accession": "GCA_021049305.1", "taxid": 36863, "species_taxid": 36863, "relation_to_type": "type", "validated": true, "ani": 79.6743, "matched_fragments": 637, "total_fragments": 2132, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rubrivivax gelatinosus", "strain": "strain=DSM 1709", "accession": "GCA_016583525.1", 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