{ "type": "genome", "identifier": "GCF_002127535.1", "organism": "Xenorhabdus vietnamensis", "title": "Xenorhabdus vietnamensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Goethe University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002127535.1", "bioproject": "PRJNA224116", "biosample": "SAMN05375056", "wgs_master": "MUBJ00000000.1", "refseq_category": "reference genome", "taxid": "351656", "species_taxid": "351656", "organism_name": "Xenorhabdus vietnamensis", "infraspecific_name": "strain=DSM 22392", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/05/11", "asm_name": "ASM212753v1", "asm_submitter": "Goethe University", "gbrs_paired_asm": "GCA_002127535.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/127/535/GCF_002127535.1_ASM212753v1", "excluded_from_refseq": "na", 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[ "Viet Nam" ], "sample_host_location_id": [], "data_size": "1.328 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "4666385", "Number of Sequences": "149", "Longest Sequences (bp)": "477946", "N50 (bp)": "184813", "Gap Ratio (%)": "0.057861", "GCcontent (%)": "43.0", "Number of CDSs": "3883", "Average Protein Length": "325.0", "Coding Ratio (%)": "81.1", "Number of rRNAs": "21", "Number of tRNAs": "81", "Number of CRISPRs": "3" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Xenorhabdus vietnamensis", "strain": "strain=DSM 22392", "accession": "GCA_002127535.1", "taxid": 351656, "species_taxid": 351656, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1474, "total_fragments": 1498, 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"strain=DSM 17907", "accession": "GCA_002632875.1", "taxid": 351676, "species_taxid": 351676, "relation_to_type": "type", "validated": true, "ani": 85.1505, "matched_fragments": 945, "total_fragments": 1498, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xenorhabdus doucetiae", "strain": "strain=FRM16", "accession": "GCA_000968195.1", "taxid": 351671, "species_taxid": 351671, "relation_to_type": "type", "validated": true, "ani": 85.0896, "matched_fragments": 972, "total_fragments": 1498, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xenorhabdus doucetiae", "strain": "strain=DSM 17909", "accession": "GCA_008124675.1", "taxid": 351671, "species_taxid": 351671, "relation_to_type": "type", "validated": true, "ani": 85.0202, "matched_fragments": 952, "total_fragments": 1498, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xenorhabdus lircayensis", "strain": "strain=VLS", "accession": "GCA_016306625.1", "taxid": 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