{
    "type": "genome",
    "identifier": "GCF_002128425.1",
    "organism": "Gottfriedia acidiceleris",
    "title": "Gottfriedia acidiceleris",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Northeast Agricultural University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_002128425.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN06843740",
        "wgs_master": "NESS00000000.1",
        "refseq_category": "reference genome",
        "taxid": "371036",
        "species_taxid": "371036",
        "organism_name": "Gottfriedia acidiceleris",
        "infraspecific_name": "strain=DSM 18954",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/05/11",
        "asm_name": "ASM212842v1",
        "asm_submitter": "Northeast Agricultural University",
        "gbrs_paired_asm": "GCA_002128425.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/128/425/GCF_002128425.1_ASM212842v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4770625",
        "genome_size_ungapped": "4770615",
        "gc_percent": "33.000000",
        "replicon_count": "0",
        "scaffold_count": "45",
        "contig_count": "45",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_002128425.1-RS_2024_12_11",
        "annotation_date": "2024-12-11",
        "total_gene_count": "4705",
        "protein_coding_gene_count": "4532",
        "non_coding_gene_count": "99",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-05-11",
    "dateModified": "2017-05-11",
    "datePublished": "2017-05-11",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Gottfriedia acidiceleris"
        ],
        "sample_taxid": [
            "371036"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "USA"
        ],
        "sample_host_location_id": [],
        "data_size": "1.333 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4770625",
        "Number of Sequences": "45",
        "Longest Sequences (bp)": "734148",
        "N50 (bp)": "406867",
        "Gap Ratio (%)": "0.000210",
        "GCcontent (%)": "32.8",
        "Number of CDSs": "4663",
        "Average Protein Length": "283.2",
        "Coding Ratio (%)": "83.1",
        "Number of rRNAs": "3",
        "Number of tRNAs": "81",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Gottfriedia acidiceleris",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
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                "accession": "GCA_002156925.1",
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            },
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                "status": "below_threshold"
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            {
                "organism_name": "Gottfriedia solisilvae",
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                "species_taxid": 1516104,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Gottfriedia solisilvae",
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                "accession": "GCA_002128405.1",
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                "species_taxid": 1516104,
                "relation_to_type": "type",
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                "matched_fragments": 751,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Metabacillus endolithicus",
                "strain": "strain=KCTC 33579",
                "accession": "GCA_023078335.1",
                "taxid": 1535204,
                "species_taxid": 1535204,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 116,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Alkalihalobacterium alkalinitrilicum",
                "strain": "strain=DSM 22532",
                "accession": "GCA_002019605.1",
                "taxid": 427920,
                "species_taxid": 427920,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.4125,
                "matched_fragments": 88,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Robertmurraya massiliosenegalensis",
                "strain": "strain=JC6",
                "accession": "GCA_000311725.1",
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                "relation_to_type": "type",
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            }
        ],
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        "gtdb_result": [
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                "accession": "GCF_002128425.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_G;g__Gottfriedia",
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                "min_intra_species_ani": "96.26",
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            },
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_002564465.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillaceae_G;g__Gottfriedia",
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            },
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            },
            {
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
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        "cell_length": null,
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        "genome_size": null,
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        "coding_genes": null,
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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        "filament_cell_shape": null,
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        "vibrio_cell_shape": null,
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    },
    "_genome_taxon": [
        "Gottfriedia",
        "acidiceleris"
    ],
    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}