{ "type": "genome", "identifier": "GCF_002149015.1", "organism": "Gordonia lacunae", "title": "Gordonia lacunae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Cape Peninsula University of Technology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002149015.1", "bioproject": "PRJNA224116", "biosample": "SAMN06928587", "wgs_master": "NGFO00000000.1", "refseq_category": "reference genome", "taxid": "417102", "species_taxid": "417102", "organism_name": "Gordonia lacunae", "infraspecific_name": "strain=BS2", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/05/18", "asm_name": "ASM214901v1", "asm_submitter": "Cape Peninsula University of Technology", "gbrs_paired_asm": "GCA_002149015.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/149/015/GCF_002149015.1_ASM214901v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5756417", "genome_size_ungapped": "5756417", "gc_percent": "68.000000", "replicon_count": "0", "scaffold_count": "90", "contig_count": "90", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002149015.1-RS_2024_04_22", "annotation_date": "2024-04-22", "total_gene_count": "5222", "protein_coding_gene_count": "5099", "non_coding_gene_count": "62", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-05-18", "dateModified": "2017-05-18", "datePublished": "2017-05-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Gordonia lacunae" ], "sample_taxid": [ "417102" ], "sample_host_organism": [ "Not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South 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95, "status": "conclusive" }, { "organism_name": "Gordonia terrae", "strain": "strain=NRRL B-16283", "accession": "GCA_003183825.1", "taxid": 2055, "species_taxid": 2055, "relation_to_type": "suspected-type", "validated": true, "ani": 91.7797, "matched_fragments": 1578, "total_fragments": 1879, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gordonia terrae", "strain": "strain=NRRL B-16283", "accession": "GCA_000716975.1", "taxid": 2055, "species_taxid": 2055, "relation_to_type": "suspected-type", "validated": true, "ani": 91.7532, "matched_fragments": 1578, "total_fragments": 1879, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gordonia terrae", "strain": "strain=3612", "accession": "GCA_001698225.1", "taxid": 2055, "species_taxid": 2055, "relation_to_type": "suspected-type", "validated": true, "ani": 91.7244, "matched_fragments": 1598, "total_fragments": 1879, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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