# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_16	LOCUS_00160	sequence01:15346..15591(-)	partial			WP_002658367.1	rhodanese-like domain-containing protein	100.0	65.9	98.8
MGA_21	LOCUS_00210	sequence01:20052..20483(-)	frameshift		20478	WP_010957235.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	96.5	39.2	55.8
MGA_22	LOCUS_00220	sequence01:20446..21084(-)	frameshift		20478	WP_010957235.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	97.6	62.2	38.4
MGA_76	LOCUS_00760	sequence01:74516..75769(+)	partial			WP_003119805.1	lipoprotein-releasing ABC transporter permease subunit	74.8	73.0	20.7
MGA_197	LOCUS_01970	sequence01:203344..204087(+)	partial			WP_002656686.1	hemolysin family protein	100.0	60.0	100.0
MGA_218	LOCUS_02180	sequence01:227731..228084(-)	partial			WP_010890332.1	SIMPL domain-containing protein	99.1	50.2	56.0
MGA_262	LOCUS_02620	sequence01:280503..280766(-)	partial			WP_010889722.1	RNA chaperone Hfq	100.0	54.7	100.0
MGA_364	LOCUS_03640	sequence01:382585..383115(-)	partial			WP_010889737.1	hypothetical protein	100.0	69.0	100.0
MGA_651	LOCUS_06490	sequence01:711389..712111(-)	partial			WP_002657405.1	hypothetical protein	90.4	62.4	91.7
MGA_721	LOCUS_07190	sequence01:789993..790469(-)	partial			WP_010889814.1	ABC transporter permease	100.0	48.5	93.7
MGA_812	LOCUS_08100	sequence01:896901..898049(-)	partial			WP_002657295.1	lipoprotein	100.0	71.0	99.2
MGA_819	LOCUS_08170	sequence01:909112..909255(-)	frameshift		909314,909110,909272,909371,909341	WP_010883928.1	hypothetical protein	97.9	41.5	65.3
MGA_830	LOCUS_08280	sequence02:13003..13224(-)	partial			WP_010890331.1	lipoprotein P35	93.2	25.9	57.4
MGA_831	LOCUS_08290	sequence02:13217..13681(-)	frameshift		13716	WP_010883946.1	plasmid maintenance protein	99.4	42.4	83.3
MGA_832	LOCUS_08300	sequence02:14280..14435(-)	frameshift,internal_stop_codon	14481..14483(-)	14294	WP_010883949.1	plasmid maintenance protein	100.0	41.8	70.6
MGA_863	LOCUS_08610	sequence04:1..4816(+)	internal_stop_codon	4814..4816(+)		WP_075552700.1	variable large family protein	14.7	68.6	39.8
MGA_864	LOCUS_08620	sequence04:4973..6265(+)	frameshift,internal_stop_codon	4814..4816(+)	6262	WP_075552700.1	variable large family protein	53.0	65.7	41.3
MGA_865	LOCUS_08630	sequence04:6313..7422(+)	frameshift		7419,6262	WP_075552700.1	variable large family protein	61.8	65.7	39.5
MGA_866	LOCUS_08640	sequence04:7470..7865(+)	frameshift		7419	WP_075552700.1	variable large family protein	93.9	41.5	40.4
MGA_867	LOCUS_08650	sequence04:8487..8741(+)	frameshift		8779	WP_183221031.1	DUF226 domain-containing protein	71.4	34.6	68.8
MGA_876	LOCUS_08740	sequence04:16114..16260(+)	frameshift,internal_stop_codon	15943..15945(+),15876..15878(+),15934..15936(+)	16075,15948,16013	WP_014023152.1	RNA-guided endonuclease TnpB family protein	100.0	12.7	79.2
MGA_882	LOCUS_08800	sequence04:19918..20340(+)	internal_stop_codon	19870..19872(+),20338..20340(+)		WP_010890312.1	chromosome replication/partitioning protein	97.9	67.0	53.6
MGA_884	LOCUS_08820	sequence05:65..754(+)	frameshift		751	WP_010257444.1	DUF1073 domain-containing protein	100.0	56.3	96.5
MGA_885	LOCUS_08830	sequence05:751..1287(+)	frameshift		748	WP_010257444.1	DUF1073 domain-containing protein	100.0	43.7	99.4
MGA_886	LOCUS_08840	sequence05:1304..1633(+)	frameshift		1621	WP_002658634.1	DUF1357 domain-containing protein	97.2	46.1	96.2
MGA_887	LOCUS_08850	sequence05:1642..1995(+)	frameshift		1618	WP_002658634.1	DUF1357 domain-containing protein	100.0	50.9	97.4
MGA_966	LOCUS_09640	sequence05:57464..58120(+)	internal_stop_codon	58118..58120(+)		WP_010883724.1	ErpB	67.0	38.6	89.7
MGA_967	LOCUS_09650	sequence05:58217..58600(+)	internal_stop_codon	58118..58120(+)		WP_010883724.1	ErpB	100.0	33.6	96.1
MGA_977	LOCUS_09750	sequence06:4949..5302(+)	internal_stop_codon	5300..5302(+)		WP_010883815.1	DUF3890 domain-containing protein	92.3	71.5	100.0
MGA_992	LOCUS_09900	sequence06:14252..14899(+)	internal_stop_codon	14897..14899(+)		WP_010883915.1	DUF685 domain-containing protein	100.0	79.3	94.0
MGA_1006	LOCUS_10040	sequence06:23803..24213(+)	frameshift,internal_stop_codon	24179..24181(+),24188..24190(+)	24177	WP_010883759.1	DUF244 domain-containing protein	98.5	30.4	88.8
MGA_1007	LOCUS_10050	sequence06:24251..25111(+)	frameshift		25096,24204	WP_010883738.1	DUF244 domain-containing protein	98.6	63.9	98.6
MGA_1011	LOCUS_10090	sequence06:27401..28417(+)	partial			WP_010883724.1	ErpB	47.6	42.6	71.4
MGA_1044	LOCUS_10420	sequence07:18287..18853(-)	frameshift		18933	WP_010883754.1	ERF family protein	100.0	60.1	93.1
MGA_1045	LOCUS_10430	sequence07:18811..19227(-)	frameshift		18933	WP_010883754.1	ERF family protein	71.0	31.3	95.9
MGA_1060	LOCUS_10580	sequence08:1306..1458(+)	internal_stop_codon	1456..1458(+)		WP_010883890.1	DUF1357 domain-containing protein	88.0	19.1	90.9
MGA_1061	LOCUS_10590	sequence08:1462..2001(+)	internal_stop_codon	1456..1458(+)		WP_010883890.1	DUF1357 domain-containing protein	99.4	77.4	93.3
MGA_1093	LOCUS_10910	sequence08:21975..22253(+)	internal_stop_codon	22251..22253(+)		WP_010883737.1	Bdr family repetitive protein	98.9	40.0	68.1
MGA_1106	LOCUS_11040	sequence09:3379..3828(+)	frameshift		3798	WP_010883929.1	DUF228 domain-containing protein	100.0	78.0	90.6
MGA_1107	LOCUS_11050	sequence09:3825..3953(+)	frameshift		3798	WP_010883929.1	DUF228 domain-containing protein	100.0	22.0	97.6
MGA_1108	LOCUS_11060	sequence09:3975..4487(+)	frameshift		4466	WP_010883814.1	hypothetical protein	96.5	51.4	100.0
MGA_1109	LOCUS_11070	sequence09:4507..4938(+)	frameshift		4463	WP_010883774.1	hypothetical protein	100.0	44.8	100.0
MGA_1116	LOCUS_11140	sequence09:8380..8745(+)	frameshift		8378	WP_010883794.1	DUF1473 family protein	100.0	80.1	97.5
MGA_1120	LOCUS_11180	sequence09:10558..11037(+)	frameshift		10447	WP_010883770.1	DUF792 family protein	100.0	70.0	96.2
MGA_1122	LOCUS_11200	sequence09:12009..12152(+)	internal_stop_codon	12150..12152(+)		WP_010883798.1	DUF777 family protein	100.0	25.5	97.9
MGA_1125	LOCUS_11230	sequence09:13807..14244(+)	frameshift		14232	WP_010883801.1	DUF735 family protein	97.9	70.6	100.0
MGA_1133	LOCUS_11310	sequence09:17773..18120(-)	internal_stop_codon	18253..18255(-),18163..18165(-)		WP_014017690.1	ERF family protein	100.0	33.9	94.8
MGA_1134	LOCUS_11320	sequence09:18253..18693(-)	internal_stop_codon	18253..18255(-),18163..18165(-),18769..18771(-)		WP_010883781.1	ERF family protein	100.0	43.5	77.4
MGA_1142	LOCUS_11400	sequence09:25003..25479(-)	internal_stop_codon	25558..25560(-)		WP_010883864.1	site-specific integrase	100.0	61.2	94.3
MGA_1143	LOCUS_11410	sequence09:25558..25779(-)	internal_stop_codon	25558..25560(-)		WP_010883864.1	site-specific integrase	100.0	28.3	74.0
MGA_1150	LOCUS_11480	sequence10:1144..2157(-)	partial			WP_010890314.1	class I SAM-dependent DNA methyltransferase	97.6	25.8	74.2
MGA_1151	LOCUS_11490	sequence10:2752..3156(-)	frameshift		3355,2758,3166	WP_010890314.1	class I SAM-dependent DNA methyltransferase	88.1	9.2	70.3
MGA_1152	LOCUS_11500	sequence10:3159..3347(-)	frameshift		3355,3166	WP_010890314.1	class I SAM-dependent DNA methyltransferase	91.9	4.5	64.9
MGA_1153	LOCUS_11510	sequence10:3350..3517(-)	frameshift		3355,3166	WP_010890314.1	class I SAM-dependent DNA methyltransferase	98.2	4.2	94.4
MGA_1156	LOCUS_11540	sequence10:6738..6917(-)	frameshift		6864,6746	WP_010890314.1	class I SAM-dependent DNA methyltransferase	71.2	3.4	72.7
MGA_1167	LOCUS_11650	sequence10:18907..19107(+)	frameshift,internal_stop_codon	19107..19109(+),18780..18782(+),18696..18698(+),18710..18712(+)	18812,18773	WP_010890314.1	class I SAM-dependent DNA methyltransferase	100.0	5.2	80.3
MGA_1171	LOCUS_11690	sequence10:23007..23591(-)	partial			WP_010890334.1	immunogenic protein P37	70.6	42.5	41.1
MGA_1173	LOCUS_11710	sequence10:24227..24604(+)	frameshift		24237,24174	WP_010890362.1	hypothetical protein	96.8	52.1	39.2
MGA_1179	LOCUS_11770	sequence10:28520..29146(-)	internal_stop_codon	28520..28522(-)		WP_010890341.1	hypothetical protein	100.0	73.6	49.1
MGA_1186	LOCUS_11840	sequence10:36320..36508(-)	partial			WP_014023068.1	NINE protein	80.6	53.2	90.0
MGA_1187	LOCUS_11850	sequence11:482..667(+)	frameshift		664,679	WP_010890261.1	virulence associated lipoprotein	96.7	24.7	86.7
MGA_1188	LOCUS_11860	sequence11:927..1211(+)	frameshift		664,679	WP_010890261.1	virulence associated lipoprotein	98.9	37.9	73.1
MGA_1191	LOCUS_11890	sequence11:7270..7476(+)	frameshift,internal_stop_codon	7224..7226(+),7227..7229(+)	7268	WP_010890339.1	Bdr family repetitive protein	85.3	31.5	60.3
MGA_1229	LOCUS_12270	sequence12:8266..8445(+)	partial			WP_010258115.1	BlyA family holin	66.1	66.1	92.3
MGA_1270	LOCUS_12680	sequence12:39872..40111(-)	partial			WP_010890394.1	hypothetical protein	69.6	69.6	76.4
MGA_1279	LOCUS_12770	sequence12:48577..49215(-)	partial			WP_010890326.1	complement regulator-acquiring protein	90.6	66.2	34.9
MGA_1280	LOCUS_12780	sequence12:49440..49853(-)	partial			WP_010890397.1	complement regulator-acquiring protein	54.7	32.3	40.7
MGA_1287	LOCUS_12850	sequence13:1447..1794(+)	frameshift		1791	WP_010890262.1	S2/P23 family protein	100.0	40.1	87.8
MGA_1288	LOCUS_12860	sequence13:1706..2248(+)	frameshift		1791	WP_010890262.1	S2/P23 family protein	98.3	61.7	85.3
MGA_1294	LOCUS_12920	sequence13:6316..6654(-)	partial			WP_010890315.1	plasmid maintenance protein	62.5	23.5	54.3
MGA_1299	LOCUS_12970	sequence13:9218..9415(+)	internal_stop_codon	9413..9415(+)		WP_002658432.1	hypothetical protein	100.0	50.4	98.5
MGA_1300	LOCUS_12980	sequence13:9419..9607(+)	internal_stop_codon	9413..9415(+)		WP_002658432.1	hypothetical protein	100.0	48.1	100.0
MGA_1329	LOCUS_13270	sequence13:29917..30954(+)	partial			WP_010883925.1	laminin-binding protein ErpX	44.3	44.3	94.1
MGA_1333	LOCUS_13310	sequence13:33853..34338(+)	internal_stop_codon	34336..34338(+)		WP_010883851.1	DUF1073 domain-containing protein	100.0	39.6	100.0
MGA_1334	LOCUS_13320	sequence13:34351..34731(+)	frameshift,internal_stop_codon	34336..34338(+)	34713	WP_010883789.1	DUF1073 domain-containing protein	100.0	31.0	89.7
MGA_1335	LOCUS_13330	sequence13:34920..35078(+)	frameshift		34719	WP_010883789.1	DUF1073 domain-containing protein	100.0	12.8	100.0
MGA_1342	LOCUS_13400	sequence13:39782..39913(-)	frameshift,internal_stop_codon	39719..39721(-),39530..39532(-)	39562,39799	WP_010890294.1	hypothetical protein	90.7	21.5	92.3
MGA_1343	LOCUS_13410	sequence13:39939..40166(-)	partial			WP_010890295.1	DUF1073 domain-containing protein	100.0	22.0	97.3
MGA_1346	LOCUS_13440	sequence13:43895..44176(-)	frameshift,internal_stop_codon	44436..44438(-)	43883,44036,44348,44213	WP_002665626.1	type I restriction endonuclease	89.2	21.1	56.6
MGA_1347	LOCUS_13450	sequence13:44694..44963(+)	internal_stop_codon	44961..44963(+)		WP_010890322.1	MFS transporter	87.6	19.9	78.2
MGA_1349	LOCUS_13470	sequence13:47764..48111(-)	internal_stop_codon	48232..48234(-)		WP_010890331.1	lipoprotein P35	100.0	43.7	75.7
MGA_1350	LOCUS_13480	sequence13:48412..48606(-)	frameshift,internal_stop_codon	48231..48233(-)	48395	WP_010890325.1	virulence associated lipoprotein	46.9	6.7	73.3
MGA_1352	LOCUS_13500	sequence13:50375..50530(-)	frameshift,internal_stop_codon	50576..50578(-)	50389	WP_010883949.1	plasmid maintenance protein	100.0	41.8	70.6
