{ "type": "genome", "identifier": "GCF_002155685.1", "organism": "Erythrobacter colymbi", "title": "Erythrobacter colymbi", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Second Institute of Oceanography, State Oceanic Administration", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002155685.1", "bioproject": "PRJNA224116", "biosample": "SAMN06251559", "wgs_master": "MUYK00000000.1", "refseq_category": "reference genome", "taxid": "1161202", "species_taxid": "1161202", "organism_name": "Erythrobacter colymbi", "infraspecific_name": "strain=JCM 18338", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/05/22", "asm_name": "ASM215568v1", "asm_submitter": "Second Institute of Oceanography, State Oceanic Administration", "gbrs_paired_asm": "GCA_002155685.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/155/685/GCF_002155685.1_ASM215568v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4309205", "genome_size_ungapped": "4309164", "gc_percent": "66.500000", "replicon_count": "0", "scaffold_count": "52", "contig_count": "52", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002155685.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "4151", "protein_coding_gene_count": "4058", "non_coding_gene_count": "50", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-05-22", "dateModified": "2017-05-22", "datePublished": "2017-05-22", "_annotation": { "sample_count": 1, "sample_organism": [ "Erythrobacter colymbi" ], "sample_taxid": [ "1161202" ], "sample_host_organism": [], 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"below_threshold" }, { "organism_name": "Pelagerythrobacter rhizovicinus", "strain": "strain=AY-3R", "accession": "GCA_004135625.1", "taxid": 2268576, "species_taxid": 2268576, "relation_to_type": "type", "validated": true, "ani": 79.4697, "matched_fragments": 471, "total_fragments": 1410, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania pelagi", "strain": "strain=JCM 17468", "accession": "GCA_009827295.1", "taxid": 994320, "species_taxid": 994320, "relation_to_type": "type", "validated": true, "ani": 79.3091, "matched_fragments": 458, "total_fragments": 1410, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alteriqipengyuania abyssalis", "strain": "strain=NZ-12B", "accession": "GCA_019857185.1", "taxid": 2860200, "species_taxid": 2860200, "relation_to_type": "type", "validated": true, "ani": 79.2827, "matched_fragments": 514, "total_fragments": 1410, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { 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