{ "type": "genome", "identifier": "GCF_002157145.1", "organism": "Acidovorax carolinensis", "title": "Acidovorax carolinensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of North Carolina - Chapel Hill", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002157145.1", "bioproject": "PRJNA224116", "biosample": "SAMN03755632", "wgs_master": "na", "refseq_category": "na", "taxid": "553814", "species_taxid": "553814", "organism_name": "Acidovorax carolinensis", "infraspecific_name": "strain=NA3", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/05/24", "asm_name": "ASM215714v1", "asm_submitter": "University of North Carolina - Chapel Hill", "gbrs_paired_asm": "GCA_002157145.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/157/145/GCF_002157145.1_ASM215714v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4122625", "genome_size_ungapped": "4122625", "gc_percent": "64.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-03-05", "total_gene_count": "3892", "protein_coding_gene_count": "3525", "non_coding_gene_count": "69", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-05-24", "dateModified": "2017-05-24", "datePublished": "2017-05-24", "_annotation": { "sample_count": 1, "sample_organism": [ "Acidovorax carolinensis" ], "sample_taxid": [ "553814" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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1372, "total_fragments": 1374, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Acidovorax soli", "strain": "strain=DSM 25157", "accession": "GCA_900107605.1", "taxid": 592050, "species_taxid": 592050, "relation_to_type": "type", "validated": true, "ani": 88.4957, "matched_fragments": 1006, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax kalamii", "strain": "strain=KNDSW-TSA6", "accession": "GCA_002245625.1", "taxid": 2004485, "species_taxid": 2004485, "relation_to_type": "type", "validated": true, "ani": 84.3921, "matched_fragments": 904, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax delafieldii", "strain": "strain=DSM 64", "accession": "GCA_007993815.1", "taxid": 47920, "species_taxid": 47920, "relation_to_type": "type", "validated": true, "ani": 84.3596, "matched_fragments": 904, "total_fragments": 1374, "ani_threshold": 95, "status": 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"strain": "strain=NBRC 13960", "accession": "GCA_003568725.1", "taxid": 80881, "species_taxid": 80881, "relation_to_type": "type", "validated": true, "ani": 82.0441, "matched_fragments": 692, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax valerianellae", "strain": "strain=DSM 16619", "accession": "GCA_900102625.1", "taxid": 187868, "species_taxid": 187868, "relation_to_type": "type", "validated": true, "ani": 81.8121, "matched_fragments": 740, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Simplicispira hankyongi", "strain": "strain=NY-02", "accession": "GCA_003570885.1", "taxid": 2315688, "species_taxid": 2315688, "relation_to_type": "type", "validated": true, "ani": 80.8994, "matched_fragments": 673, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Simplicispira suum", "strain": "strain=SC1-8", "accession": "GCA_003008595.1", 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"type", "validated": true, "ani": 79.8758, "matched_fragments": 542, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Xylophilus ampelinus", "strain": "strain=CFBP 1192", "accession": "GCA_024832295.1", "taxid": 54067, "species_taxid": 54067, "relation_to_type": "type", "validated": true, "ani": 79.5125, "matched_fragments": 510, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Ramlibacter agri", "strain": "strain=G-1-2-2", "accession": "GCA_012927085.1", "taxid": 2728837, "species_taxid": 2728837, "relation_to_type": "type", "validated": true, "ani": 79.1456, "matched_fragments": 574, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002157145.1", "gtdb_species": "s__Acidovorax carolinensis", "ani": 100.0, "matched_fragments": 1372, 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