{
    "type": "genome",
    "identifier": "GCF_002209565.1",
    "organism": "Candidimonas nitroreducens",
    "title": "Candidimonas nitroreducens",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Northwest A&F University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_002209565.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN07270373",
        "wgs_master": "NJIH00000000.1",
        "refseq_category": "reference genome",
        "taxid": "683354",
        "species_taxid": "683354",
        "organism_name": "Candidimonas nitroreducens",
        "infraspecific_name": "strain=SC-089",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/06/27",
        "asm_name": "ASM220956v1",
        "asm_submitter": "Northwest A&F University",
        "gbrs_paired_asm": "GCA_002209565.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/209/565/GCF_002209565.1_ASM220956v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "5606995",
        "genome_size_ungapped": "5606995",
        "gc_percent": "63.500000",
        "replicon_count": "0",
        "scaffold_count": "34",
        "contig_count": "34",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_002209565.1-RS_2024_12_13",
        "annotation_date": "2024-12-13",
        "total_gene_count": "5033",
        "protein_coding_gene_count": "4937",
        "non_coding_gene_count": "49",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-06-27",
    "dateModified": "2017-06-27",
    "datePublished": "2017-06-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Candidimonas nitroreducens"
        ],
        "sample_taxid": [
            "683354"
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        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "not applicable"
        ],
        "sample_host_location_id": [],
        "data_size": "1.561 MB",
        "sample_ph_range": {
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            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
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    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "5606995",
        "Number of Sequences": "34",
        "Longest Sequences (bp)": "852818",
        "N50 (bp)": "370610",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "63.6",
        "Number of CDSs": "4969",
        "Average Protein Length": "327.0",
        "Coding Ratio (%)": "86.9",
        "Number of rRNAs": "2",
        "Number of tRNAs": "45",
        "Number of CRISPRs": "3"
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    "has_analysis": true,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Bordetella_C",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            }
        ]
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        "cell_diameter": -0.097,
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        "growth_tmp": 28.0,
        "optimum_tmp": 27.5,
        "optimum_ph": null,
        "genome_size": 5641410.0,
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        "rRNA16S_genes": null,
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        "gram_stain": 0.0,
        "sporulation": null,
        "motility": 1.0,
        "range_salinity": null,
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        "aerobic_respiration": 0.0,
        "mesophilic_range_tmp": null,
        "thermophilic_range_tmp": null,
        "psychrophilic_range_tmp": null,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
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    "_genome_taxon": [
        "Candidimonas",
        "nitroreducens"
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}