{ "type": "genome", "identifier": "GCF_002211445.1", "organism": "Noviherbaspirillum denitrificans", "title": "Noviherbaspirillum denitrificans", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of Minnesota", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002211445.1", "bioproject": "PRJNA224116", "biosample": "SAMN04498912", "wgs_master": "LSTO00000000.1", "refseq_category": "reference genome", "taxid": "1968433", "species_taxid": "1968433", "organism_name": "Noviherbaspirillum denitrificans", "infraspecific_name": "strain=TSA40", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/06/29", "asm_name": "ASM221144v1", "asm_submitter": "University of Minnesota", "gbrs_paired_asm": "GCA_002211445.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/211/445/GCF_002211445.1_ASM221144v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5798956", "genome_size_ungapped": "5794226", "gc_percent": "61.500000", "replicon_count": "0", "scaffold_count": "49", "contig_count": "49", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002211445.1-RS_2024_03_19", "annotation_date": "2024-03-19", "total_gene_count": "5756", "protein_coding_gene_count": "5524", "non_coding_gene_count": "61", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-06-29", "dateModified": "2017-06-29", "datePublished": "2017-06-29", "_annotation": { "sample_count": 1, "sample_organism": [ "Noviherbaspirillum denitrificans" ], "sample_taxid": [ "1968433" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Noviherbaspirillum aerium", "strain": "strain=122213-3", "accession": "GCA_008929045.1", "taxid": 2588497, "species_taxid": 2588497, "relation_to_type": "type", "validated": true, "ani": 80.653, "matched_fragments": 731, "total_fragments": 1906, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Noviherbaspirillum autotrophicum", "strain": "strain=TSA66", "accession": "GCA_000818395.1", "taxid": 709839, "species_taxid": 709839, "relation_to_type": "type", "validated": true, "ani": 80.6384, "matched_fragments": 736, "total_fragments": 1906, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Noviherbaspirillum humi", "strain": "strain=U15", "accession": "GCA_900188095.1", "taxid": 1688639, "species_taxid": 1688639, "relation_to_type": "type", "validated": true, "ani": 80.451, "matched_fragments": 610, "total_fragments": 1906, "ani_threshold": 95, "status": "below_threshold" 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