{ "type": "genome", "identifier": "GCF_002217205.1", "organism": "Flavobacterium branchiophilum NBRC 15030 = ATCC 35035", "title": "Flavobacterium branchiophilum NBRC 15030 = ATCC 35035", "description": "na", "data type": "Genome sequencing and assembly", "organization": "FDA", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002217205.1", "bioproject": "PRJNA224116", "biosample": "SAMN06049065", "wgs_master": "MUGT00000000.1", "refseq_category": "na", "taxid": "1218110", "species_taxid": "55197", "organism_name": "Flavobacterium branchiophilum NBRC 15030 = ATCC 35035", "infraspecific_name": "strain=ATCC 35035", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/07/12", "asm_name": "ASM221720v1", "asm_submitter": "FDA", "gbrs_paired_asm": "GCA_002217205.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/217/205/GCF_002217205.1_ASM221720v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3580395", "genome_size_ungapped": "3575459", "gc_percent": "33.000000", "replicon_count": "0", "scaffold_count": "241", "contig_count": "241", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002217205.1-RS_2024_10_23", "annotation_date": "2024-10-23", "total_gene_count": "3184", "protein_coding_gene_count": "3084", "non_coding_gene_count": "47", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-07-12", "dateModified": "2017-07-12", "datePublished": "2017-07-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Flavobacterium branchiophilum NBRC 15030 = ATCC 35035" ], "sample_taxid": [ "1218110" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Japan:Gunma" ], "sample_host_location_id": [], "data_size": "0.994 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3580395", "Number of Sequences": "241", "Longest Sequences (bp)": "119721", "N50 (bp)": "28687", "Gap Ratio (%)": "0.139957", "GCcontent (%)": "32.8", "Number of CDSs": "3002", "Average Protein Length": "330.4", "Coding Ratio (%)": "83.1", "Number of rRNAs": "2", "Number of tRNAs": "41", "Number of CRISPRs": "3" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Flavobacterium branchiophilum", "strain": "strain=ATCC 35035", "accession": "GCA_002217205.1", "taxid": 55197, "species_taxid": 55197, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1060, "total_fragments": 1072, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Flavobacterium branchiophilum", "strain": "strain=DSM 24789", "accession": "GCA_006716585.1", "taxid": 55197, "species_taxid": 55197, "relation_to_type": "type", "validated": true, "ani": 99.9767, "matched_fragments": 1070, "total_fragments": 1072, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Flavobacterium branchiophilum", "strain": "strain=NBRC 15030", "accession": "GCA_007990815.1", "taxid": 55197, "species_taxid": 55197, "relation_to_type": "type", "validated": true, "ani": 99.9427, "matched_fragments": 1034, "total_fragments": 1072, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Flavobacterium proteolyticum", "strain": "strain=1Y8A", "accession": "GCA_015223105.1", "taxid": 2911683, "species_taxid": 2911683, "relation_to_type": "type", "validated": true, "ani": 77.9269, "matched_fragments": 112, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium dankookense", "strain": "strain=DSM 25687", "accession": "GCA_004362665.1", "taxid": 706186, "species_taxid": 706186, "relation_to_type": "type", "validated": true, "ani": 77.6327, "matched_fragments": 168, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium macrobrachii", "strain": "strain=an-8", "accession": "GCA_014486675.1", "taxid": 591204, "species_taxid": 591204, "relation_to_type": "type", "validated": true, "ani": 77.5882, "matched_fragments": 157, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium crassostreae", "strain": "strain=LPB0076", "accession": "GCA_001831475.1", "taxid": 1763534, "species_taxid": 1763534, "relation_to_type": "type", "validated": true, "ani": 77.5598, "matched_fragments": 147, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium cellulosilyticum", "strain": "strain=AR-3-4", "accession": "GCA_004349355.1", "taxid": 2541731, "species_taxid": 2541731, "relation_to_type": "type", "validated": true, "ani": 77.549, "matched_fragments": 171, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium gawalongense", "strain": "strain=GSP16", "accession": "GCA_007097265.1", "taxid": 2594432, "species_taxid": 2594432, "relation_to_type": "type", "validated": true, "ani": 77.4363, "matched_fragments": 171, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium luteum", "strain": "strain=NBRC 112527", "accession": "GCA_008806775.1", "taxid": 2026654, "species_taxid": 2026654, "relation_to_type": "type", "validated": true, "ani": 77.4299, "matched_fragments": 186, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium ichthyis", "strain": "strain=NST-5", "accession": "GCA_009915155.1", "taxid": 2698827, "species_taxid": 2698827, "relation_to_type": "type", "validated": true, "ani": 77.4179, "matched_fragments": 122, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium franklandianum", "strain": "strain=LB3P56", "accession": "GCA_007097365.1", "taxid": 2594430, "species_taxid": 2594430, "relation_to_type": "type", "validated": true, "ani": 77.3938, "matched_fragments": 199, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium daejeonense", "strain": "strain=DSM 17708", "accession": "GCA_000425425.1", "taxid": 350893, "species_taxid": 350893, "relation_to_type": "type", "validated": true, "ani": 77.306, "matched_fragments": 153, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium channae", "strain": "strain=KSM-R2A30", "accession": "GCA_021172165.1", "taxid": 2897181, "species_taxid": 2897181, "relation_to_type": "type", "validated": true, "ani": 77.2071, "matched_fragments": 126, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium oncorhynchi", "strain": "strain=CCUG 59446", "accession": "GCA_002217355.1", "taxid": 728056, "species_taxid": 728056, "relation_to_type": "type", "validated": true, "ani": 77.2029, "matched_fragments": 165, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium soyae", "strain": "strain=SCIV07", "accession": "GCA_021245985.1", "taxid": 2903098, "species_taxid": 2903098, "relation_to_type": "type", "validated": true, "ani": 77.089, "matched_fragments": 161, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium sediminilitoris", "strain": "strain=YSM-43", "accession": "GCA_023008245.1", "taxid": 2024526, "species_taxid": 2024526, "relation_to_type": "type", "validated": true, "ani": 76.644, "matched_fragments": 130, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium columnare", "strain": "strain=ATCC 23463", "accession": "GCA_002530675.1", "taxid": 996, "species_taxid": 996, "relation_to_type": "type", "validated": true, "ani": 76.4766, "matched_fragments": 118, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium columnare", "strain": "strain=NBRC 100251", "accession": "GCA_007990835.1", "taxid": 996, "species_taxid": 996, "relation_to_type": "type", "validated": true, "ani": 76.4709, "matched_fragments": 112, "total_fragments": 1072, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002217205.1", "gtdb_species": "s__Flavobacterium branchiophilum", "ani": 100.0, "matched_fragments": 1060, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.60", "min_intra_species_ani": "97.23", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.84", "num_clustered_genomes": 5, "status": "conclusive" }, { "accession": "GCF_007109225.1", "gtdb_species": "s__Flavobacterium sp007109225", "ani": 77.8732, "matched_fragments": 113, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002001005.1", "gtdb_species": "s__Flavobacterium sp002001005", "ani": 77.6968, "matched_fragments": 159, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001831475.1", "gtdb_species": "s__Flavobacterium crassostreae", "ani": 77.557, "matched_fragments": 148, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_015182285.1", "gtdb_species": "s__Flavobacterium sp015182285", "ani": 77.5461, "matched_fragments": 150, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009915155.1", "gtdb_species": "s__Flavobacterium sp009915155", "ani": 77.4378, "matched_fragments": 121, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007097265.1", "gtdb_species": "s__Flavobacterium gawalongense", "ani": 77.4363, "matched_fragments": 171, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.69", "min_intra_species_ani": "99.40", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.94", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_008806775.1", "gtdb_species": "s__Flavobacterium luteum", "ani": 77.4121, "matched_fragments": 188, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_018069925.1", "gtdb_species": "s__Flavobacterium sp018069925", "ani": 77.3922, "matched_fragments": 152, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903839195.1", "gtdb_species": "s__Flavobacterium sp903839195", "ani": 77.3652, "matched_fragments": 145, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.63", "min_intra_species_ani": "96.46", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.82", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_004293165.1", "gtdb_species": "s__Flavobacterium sp004293165", "ani": 77.3533, "matched_fragments": 131, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.30", "min_intra_species_ani": "97.30", "mean_intra_species_af": "0.81", "min_intra_species_af": "0.81", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000425425.1", "gtdb_species": "s__Flavobacterium daejeonense", "ani": 77.3059, "matched_fragments": 153, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000708595.2", "gtdb_species": "s__Flavobacterium sp000708595", "ani": 77.298, "matched_fragments": 167, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.30", "min_intra_species_ani": "98.27", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.93", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_009707955.1", "gtdb_species": "s__Flavobacterium sp009707955", "ani": 77.286, "matched_fragments": 181, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_903879875.1", "gtdb_species": "s__Flavobacterium sp903879875", "ani": 77.2776, "matched_fragments": 154, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.40", "min_intra_species_ani": "99.40", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000812945.1", "gtdb_species": "s__Flavobacterium sp000812945", "ani": 77.1705, "matched_fragments": 196, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009495755.1", "gtdb_species": "s__Flavobacterium sp009495755", "ani": 77.1575, "matched_fragments": 134, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903819815.1", "gtdb_species": "s__Flavobacterium sp903819815", "ani": 77.0256, "matched_fragments": 106, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903837025.1", "gtdb_species": "s__Flavobacterium sp903837025", "ani": 77.016, "matched_fragments": 106, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002217245.1", "gtdb_species": "s__Flavobacterium columnare_A", "ani": 76.9276, "matched_fragments": 122, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.08", "min_intra_species_ani": "98.79", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.89", "num_clustered_genomes": 11, "status": "-" }, { "accession": "GCA_903824755.1", "gtdb_species": "s__Flavobacterium sp903824755", "ani": 76.8291, "matched_fragments": 136, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002352205.1", "gtdb_species": "s__Flavobacterium sp002352205", "ani": 76.7974, "matched_fragments": 147, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.95", "min_intra_species_ani": "99.95", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_003497625.1", "gtdb_species": "s__Flavobacterium sp003497625", "ani": 76.7867, "matched_fragments": 125, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004122145.1", "gtdb_species": "s__Flavobacterium piscinae", "ani": 76.7362, "matched_fragments": 139, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.76", "min_intra_species_ani": "99.76", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_903888655.1", "gtdb_species": "s__Flavobacterium sp903888655", "ani": 76.6752, "matched_fragments": 97, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002482975.1", "gtdb_species": "s__Flavobacterium sp002482975", "ani": 76.6461, "matched_fragments": 174, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002530675.1", "gtdb_species": "s__Flavobacterium columnare", "ani": 76.4929, "matched_fragments": 117, "total_fragments": 1072, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.33", "min_intra_species_ani": "99.02", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.93", "num_clustered_genomes": 39, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.302, "cell_length": 0.698, "doubling_h": 1.271, "growth_tmp": 20.0, "optimum_tmp": 18.75, "optimum_ph": 7.141, "genome_size": 3567192.2, "gc_content": 32.836, "coding_genes": 2981.667, "rRNA16S_genes": 3.0, "tRNA_genes": 43.0, "gram_stain": 0.0, "sporulation": 0.0, "motility": 0.347, "range_salinity": 0.333, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Flavobacterium", "branchiophilum", "NBRC", "15030", "=", "ATCC", "35035" ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }