{ "type": "genome", "identifier": "GCF_002217435.1", "organism": "Flavobacterium reichenbachii", "title": "Flavobacterium reichenbachii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "FDA", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002217435.1", "bioproject": "PRJNA224116", "biosample": "SAMN06049053", "wgs_master": "MUHF00000000.1", "refseq_category": "na", "taxid": "362418", "species_taxid": "362418", "organism_name": "Flavobacterium reichenbachii", "infraspecific_name": "strain=DSM 21791", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/07/12", "asm_name": "ASM221743v1", "asm_submitter": "FDA", "gbrs_paired_asm": "GCA_002217435.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/217/435/GCF_002217435.1_ASM221743v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5577968", "genome_size_ungapped": "5577649", "gc_percent": "33.500000", "replicon_count": "0", "scaffold_count": "49", "contig_count": "49", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002217435.1-RS_2024_10_23", "annotation_date": "2024-10-23", "total_gene_count": "4841", "protein_coding_gene_count": "4752", "non_coding_gene_count": "69", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-07-12", "dateModified": "2017-07-12", "datePublished": "2017-07-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Flavobacterium reichenbachii" ], "sample_taxid": [ "362418" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Germany:Westerhofer Bach" ], 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"validated": true, "ani": 82.14, "matched_fragments": 1083, "total_fragments": 1831, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium denitrificans", "strain": "strain=DSM 15936", "accession": "GCA_000425445.1", "taxid": 281361, "species_taxid": 281361, "relation_to_type": "type", "validated": true, "ani": 82.0618, "matched_fragments": 969, "total_fragments": 1831, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium endoglycinae", "strain": "strain=BB8", "accession": "GCA_017352115.1", "taxid": 2816357, "species_taxid": 2816357, "relation_to_type": "type", "validated": true, "ani": 81.9724, "matched_fragments": 1087, "total_fragments": 1831, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium circumlabens", "strain": "strain=P5626", "accession": "GCA_004345565.1", "taxid": 2133765, "species_taxid": 2133765, "relation_to_type": "type", "validated": true, "ani": 81.7751, 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