# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00010	sequence1:217..528(-)	frameshift,internal_stop_codon	533..535(-)	520,219	WP_011986514.1	endospore germination permease	99.0	27.9	32.4
MGA_3	LOCUS_00020	sequence1:533..898(-)	frameshift		553	WP_009968145.1	spore germination receptor protein GerAB	83.5	27.7	54.5
MGA_6	LOCUS_00050	sequence1:2534..3055(+)	frameshift		3193,3046	WP_000638107.1	spore germination protein	87.9	19.8	35.3
MGA_8	LOCUS_00070	sequence1:3203..3490(+)	frameshift		3040,3193,3548,3476	WP_000802302.1	spore germination protein	95.8	18.2	60.4
MGA_9	LOCUS_00080	sequence1:3551..3796(+)	frameshift		3472,3938,3794,3800,3547	WP_000638066.1	spore germination protein	100.0	11.1	70.4
MGA_10	LOCUS_00090	sequence1:4652..5005(+)	frameshift		4489,4564,4606	WP_000815826.1	GerAB/ArcD/ProY family transporter	94.0	30.6	49.1
MGA_13	LOCUS_00120	sequence1:5760..6230(+)	frameshift		5667	WP_000411389.1	spore germination protein GerHC	99.4	42.1	29.7
MGA_17	LOCUS_00160	sequence1:8352..8726(-)	partial			WP_061183603.1	DUF3888 domain-containing protein	78.2	45.9	47.6
MGA_18	LOCUS_00170	sequence1:8968..10119(-)	partial			WP_004399387.1	LD-carboxypeptidase LdcB	62.4	85.0	42.7
MGA_20	LOCUS_00190	sequence1:11925..12167(-)	frameshift,internal_stop_codon	11954..11956(-),11963..11965(-)	11833,11709,11990	WP_000738124.1	glycoside hydrolase	78.8	8.2	57.1
MGA_27	LOCUS_00260	sequence1:18691..18999(-)	frameshift		19052	WP_000666434.1	DinB family protein	97.1	56.9	47.5
MGA_28	LOCUS_00270	sequence1:18996..19190(-)	frameshift		19055	WP_003234141.1	damage-inducible protein DinB	81.2	32.6	46.4
MGA_38	LOCUS_00370	sequence1:30229..30663(-)	partial			WP_010964379.1	tetratricopeptide repeat protein	91.0	34.8	34.1
MGA_46	LOCUS_00450	sequence1:39939..40484(-)	partial			WP_010946822.1	GNAT family N-acetyltransferase	93.9	28.6	35.8
MGA_54	LOCUS_00530	sequence1:48102..48290(-)	partial			WP_000164087.1	pyruvate carboxylase	100.0	5.4	72.6
MGA_56	LOCUS_00550	sequence1:49690..49866(-)	partial			WP_003229393.1	RNA-binding riboflavin kinase RibR	93.1	23.5	46.3
MGA_64	LOCUS_00630	sequence1:55683..56021(-)	frameshift,internal_stop_codon	56021..56023(-)	56097,55972,55684,55609,56075	WP_010680900.1	IS110 family transposase	85.7	23.3	40.6
MGA_66	LOCUS_00650	sequence1:57219..58097(-)	partial			WP_055064620.1	acyltransferase	58.6	82.8	35.0
MGA_67	LOCUS_00660	sequence1:58559..58996(-)	frameshift,internal_stop_codon	59042..59044(-)	59128,58978	WP_000288895.1	serine hydrolase domain-containing protein	88.3	37.9	50.8
MGA_91	LOCUS_00900	sequence1:83143..83751(-)	partial			WP_011393499.1	molybdenum cofactor cytidylyltransferase	94.6	41.1	37.4
MGA_123	LOCUS_01220	sequence1:118546..118974(-)	partial			WP_011013627.1	DUF1801 domain-containing protein	88.0	58.5	44.8
MGA_124	LOCUS_01230	sequence1:119365..120840(-)	partial			WP_002371849.1	N-acetylglucosamine-specific PTS transporter subunit IIBC	99.4	72.8	62.2
MGA_174	LOCUS_01730	sequence1:166536..166673(-)	partial			WP_012804112.1	glucose 1-dehydrogenase	97.8	16.9	70.5
MGA_204	LOCUS_02030	sequence1:193237..194874(-)	partial			WP_000715695.1	precorrin-3B C(17)-methyltransferase	48.1	52.3	57.3
MGA_211	LOCUS_02100	sequence1:198954..199172(-)	partial			WP_003231427.1	YozQ family protein	72.2	53.6	48.1
MGA_242	LOCUS_02410	sequence1:238068..239810(-)	partial			WP_012259627.1	PAS domain S-box protein	41.0	19.8	37.2
MGA_245	LOCUS_02440	sequence1:241036..241686(-)	partial			WP_018306045.1	histidine kinase	95.4	59.8	32.7
MGA_250	LOCUS_02490	sequence1:244163..244690(-)	partial			WP_013224598.1	Rieske (2Fe-2S) protein	52.0	60.7	40.7
MGA_251	LOCUS_02500	sequence1:244702..245262(-)	partial			WP_001250378.1	4Fe-4S dicluster domain-containing protein	73.1	75.7	37.6
MGA_267	LOCUS_02660	sequence1:266135..266740(+)	partial			WP_011861420.1	TetR/AcrR family transcriptional regulator	68.2	63.3	34.5
MGA_285	LOCUS_02840	sequence1:287778..289637(+)	partial			WP_010966555.1	ABC transporter ATP-binding protein	84.7	74.5	62.5
MGA_288	LOCUS_02870	sequence1:291053..291403(+)	frameshift,internal_stop_codon	290865..290867(+)	290921,290806	WP_003244154.1	YitT family protein	68.1	39.3	59.5
MGA_289	LOCUS_02880	sequence1:291559..292827(-)	partial			WP_011087420.1	protein-L-isoaspartate(D-aspartate) O-methyltransferase	97.2	60.8	37.1
MGA_292	LOCUS_02910	sequence1:294653..294982(-)	partial			WP_164930948.1	prolyl oligopeptidase family serine peptidase	97.2	28.8	45.0
MGA_336	LOCUS_03350	sequence1:343222..343476(-)	frameshift		343473,343244,343046,343527	WP_003244373.1	succinyl-CoA--3-ketoacid CoA transferase subunit A	97.6	34.9	73.5
MGA_347	LOCUS_03460	sequence1:354972..355460(-)	frameshift,internal_stop_codon	354881..354883(-),354884..354886(-)	355473,354979,355430,355578,354748	WP_094396572.1	IS3 family transposase	90.1	37.6	36.9
MGA_368	LOCUS_03670	sequence1:383778..384338(-)	partial			WP_012869193.1	bifunctional UDP-sugar hydrolase/5'-nucleotidase	95.7	37.3	26.0
MGA_369	LOCUS_03680	sequence1:384356..384790(-)	frameshift		384418	WP_011338624.1	5'-nucleotidase C-terminal domain-containing protein	59.0	18.0	40.4
MGA_370	LOCUS_03690	sequence1:384873..385064(-)	partial			WP_003223835.1	sec-independent protein translocase protein TatAD	69.8	62.9	70.5
MGA_381	LOCUS_03800	sequence1:398180..398845(-)	internal_stop_codon	398903..398905(-)		WP_010680900.1	IS110 family transposase	96.4	52.2	32.2
MGA_385	LOCUS_03840	sequence1:401087..401833(-)	partial			WP_001233729.1	polysaccharide deacetylase family protein	92.7	63.9	56.1
MGA_390	LOCUS_03890	sequence1:405119..405958(-)	frameshift		406236	WP_001283116.1	PBP1A family penicillin-binding protein	74.2	23.4	57.6
MGA_391	LOCUS_03900	sequence1:406081..407352(-)	frameshift		406239	WP_001293967.1	PBP1A family penicillin-binding protein	87.5	44.1	61.9
MGA_400	LOCUS_03990	sequence1:415335..415928(-)	partial			WP_010966317.1	AAA domain-containing protein	90.9	13.2	33.5
MGA_407	LOCUS_04060	sequence1:420048..422039(-)	partial			WP_010930196.1	inverse autotransporter beta-barrel domain-containing protein	49.8	26.8	31.4
MGA_409	LOCUS_04080	sequence1:423027..423974(+)	frameshift		423935	WP_012775668.1	IS110 family transposase	95.9	77.5	46.5
MGA_419	LOCUS_04180	sequence1:432253..433398(-)	partial			WP_155030720.1	Ig-like domain-containing protein	38.6	6.3	30.8
MGA_422	LOCUS_04210	sequence1:435109..435576(-)	partial			WP_011860665.1	metallophosphoesterase	67.1	22.5	34.6
MGA_436	LOCUS_04350	sequence1:442430..442681(-)	frameshift		442686	WP_000114208.1	amidohydrolase family protein	100.0	20.0	59.0
MGA_437	LOCUS_04360	sequence1:442681..443670(-)	frameshift		442686	WP_000114208.1	amidohydrolase family protein	98.5	77.6	56.2
MGA_442	LOCUS_04410	sequence1:448261..448590(-)	partial			WP_011948973.1	M14 family metallopeptidase	60.6	14.2	40.9
MGA_453	LOCUS_04520	sequence1:461060..461692(-)	frameshift,internal_stop_codon	461685..461687(-)	461666	WP_027479724.1	3-oxoacid CoA-transferase subunit B	94.3	44.7	57.0
MGA_454	LOCUS_04530	sequence1:461685..462374(-)	frameshift,internal_stop_codon	461685..461687(-)	461666	WP_027479724.1	3-oxoacid CoA-transferase subunit B	90.8	46.5	50.0
MGA_455	LOCUS_04540	sequence1:462396..463115(-)	partial			WP_000399730.1	carboxymuconolactone decarboxylase family protein	36.4	71.9	34.5
MGA_457	LOCUS_04560	sequence1:464056..464889(-)	partial			WP_000787928.1	alpha/beta fold hydrolase	65.0	57.1	32.6
MGA_464	LOCUS_04630	sequence1:471189..471377(-)	partial			WP_003223835.1	sec-independent protein translocase protein TatAD	82.3	72.9	74.5
MGA_470	LOCUS_04690	sequence1:478895..479149(-)	frameshift		479262	WP_003244576.1	PLP-dependent aminotransferase family protein	100.0	18.2	79.8
MGA_471	LOCUS_04700	sequence1:479251..479505(-)	frameshift		479262	WP_003244576.1	PLP-dependent aminotransferase family protein	95.2	17.3	77.5
MGA_476	LOCUS_04750	sequence1:483143..484390(+)	frameshift		483149	WP_003246515.1	spore germination protein GerKA	99.3	75.6	62.4
MGA_477	LOCUS_04760	sequence1:484706..484936(-)	partial			WP_148335055.1	IS3 family transposase	50.0	11.6	71.1
MGA_481	LOCUS_04800	sequence1:489583..491661(+)	partial			WP_011392893.1	helix-turn-helix domain-containing protein	19.2	32.0	29.6
MGA_491	LOCUS_04900	sequence1:502237..504180(+)	partial			WP_003234651.1	proline utilization transcriptional regulator PutR	22.6	35.0	31.3
MGA_493	LOCUS_04920	sequence1:506698..507012(+)	partial			WP_003436150.1	hypothetical protein	89.4	20.7	40.0
MGA_505	LOCUS_05040	sequence1:518394..518747(-)	partial			WP_003244816.1	peptidoglycan endopeptidase LytE	96.6	33.5	47.8
MGA_510	LOCUS_05090	sequence1:523995..525968(-)	partial			WP_001361611.1	two-component system sensor histidine kinase AtoS	52.1	56.2	30.3
MGA_549	LOCUS_05480	sequence1:574080..574283(-)	partial			WP_218652142.1	amino acid permease	100.0	14.2	61.2
MGA_550	LOCUS_05490	sequence1:574261..574848(-)	partial			WP_162992461.1	hydroxyectoine utilization dehydratase EutB	85.1	49.6	48.8
MGA_556	LOCUS_05550	sequence1:581634..582032(-)	partial			WP_012544973.1	IS110 family transposase	91.7	31.0	36.3
MGA_562	LOCUS_05610	sequence1:589493..589711(-)	internal_stop_codon	589493..589495(-),589751..589753(-)		WP_000023352.1	recombinase family protein	98.6	35.0	59.2
MGA_563	LOCUS_05620	sequence1:589751..589996(-)	internal_stop_codon	589493..589495(-),589751..589753(-)		WP_000023352.1	recombinase family protein	100.0	39.9	71.6
MGA_573	LOCUS_05700	sequence1:603362..603754(-)	partial			WP_000830214.1	DUF2199 domain-containing protein	90.8	69.2	54.2
MGA_575	LOCUS_05720	sequence1:604237..604614(-)	partial			WP_000891986.1	DUF1048 domain-containing protein	72.8	81.4	55.8
MGA_578	LOCUS_05750	sequence1:605392..605700(-)	frameshift		605445	WP_010942355.1	recombinase family protein	96.1	51.6	48.0
MGA_588	LOCUS_05850	sequence1:617586..618401(+)	partial			WP_012775668.1	IS110 family transposase	86.3	60.6	41.8
MGA_593	LOCUS_05900	sequence1:623746..623931(+)	partial			WP_011241777.1	recombinase family protein	85.2	25.8	53.8
MGA_594	LOCUS_05910	sequence1:624352..624738(+)	partial			WP_014206799.1	citrate:proton symporter	93.8	28.4	35.8
MGA_604	LOCUS_06010	sequence1:633897..634325(-)	partial			WP_164925121.1	thioesterase family protein	69.7	72.1	30.3
MGA_633	LOCUS_06300	sequence1:658031..658423(-)	frameshift		658527	WP_003734016.1	glucosaminidase domain-containing protein	86.2	38.8	42.9
MGA_639	LOCUS_06360	sequence1:662726..663364(+)	partial			WP_011110319.1	XRE family transcriptional regulator	63.2	61.2	51.5
MGA_640	LOCUS_06370	sequence1:664247..664936(-)	partial			WP_003244862.1	sporulation-specific N-acetylmuramoyl-L-alanine amidase	83.4	74.9	63.4
MGA_642	LOCUS_06390	sequence1:666223..667143(+)	partial			WP_013225004.1	phosphotransferase family protein	51.6	49.6	27.9
MGA_651	LOCUS_06480	sequence1:676463..677257(-)	partial			WP_001020355.1	selenium-dependent molybdenum cofactor biosynthesis protein YqeB	93.2	45.5	34.1
MGA_652	LOCUS_06490	sequence1:677284..678150(-)	partial			WP_015705205.1	molybdopterin-dependent oxidoreductase	97.2	26.1	31.0
MGA_655	LOCUS_06520	sequence1:680903..681502(-)	partial			WP_093794570.1	NTP transferase domain-containing protein	94.0	50.7	35.4
MGA_670	LOCUS_06670	sequence1:698621..698941(-)	frameshift		698964	WP_001049577.1	HAMP domain-containing sensor histidine kinase	91.5	29.3	62.9
MGA_671	LOCUS_06680	sequence1:698938..699618(-)	frameshift		698964	WP_001049577.1	HAMP domain-containing sensor histidine kinase	96.9	66.2	66.2
MGA_682	LOCUS_06790	sequence1:709119..709265(-)	partial			WP_048692954.1	class I SAM-dependent methyltransferase	97.9	19.2	61.7
MGA_693	LOCUS_06900	sequence1:725657..726049(+)	frameshift		725618	WP_064376022.1	tyrosine recombinase XerS	75.4	26.3	43.9
MGA_700	LOCUS_06970	sequence1:734017..734358(+)	partial			WP_011836963.1	tyrosine recombinase XerS	94.7	29.5	40.2
MGA_729	LOCUS_07260	sequence1:766179..766949(-)	partial			WP_001351783.1	glycoside hydrolase family 25 protein	71.1	68.8	34.9
MGA_745	LOCUS_07420	sequence1:782083..782319(+)	frameshift,internal_stop_codon	782317..782319(+)	782346	WP_000795703.1	aminomethyl-transferring glycine dehydrogenase subunit 2	100.0	16.1	69.6
MGA_749	LOCUS_07460	sequence1:784573..785118(-)	partial			WP_003228628.1	transcriptional regulator FrlR	76.8	57.4	38.1
MGA_751	LOCUS_07480	sequence1:785626..787119(+)	partial			WP_002485168.1	DHA2 family efflux MFS transporter permease subunit	94.2	74.0	43.7
MGA_757	LOCUS_07540	sequence1:794741..794986(-)	partial			WP_011948839.1	glycoside hydrolase family 30 protein	98.8	18.1	46.3
MGA_771	LOCUS_07680	sequence1:806966..807340(+)	partial			WP_013533542.1	FMN-binding negative transcriptional regulator	46.8	30.1	46.8
MGA_772	LOCUS_07690	sequence1:807641..808213(-)	partial			WP_003407371.1	alpha/beta hydrolase	95.3	49.0	41.3
MGA_775	LOCUS_07720	sequence1:810056..810340(-)	partial			WP_004399261.1	SPBc2 prophage-derived DNA ligase-like protein LigB	57.4	20.0	63.0
MGA_776	LOCUS_07730	sequence1:810496..811641(+)	partial			WP_000122943.1	hypothetical protein	37.0	75.4	43.2
MGA_777	LOCUS_07740	sequence1:812098..812355(+)	partial			WP_011393297.1	site-specific integrase	80.0	17.4	48.5
MGA_786	LOCUS_07830	sequence1:820710..822032(-)	partial			WP_071541430.1	ATP-binding protein	47.3	72.5	30.0
MGA_789	LOCUS_07860	sequence1:825385..826125(-)	partial			WP_003242699.1	two-component sensor histidine kinase PsdS	98.8	68.0	46.1
MGA_803	LOCUS_08000	sequence1:835925..836194(+)	frameshift		835940	WP_000333822.1	asparagine synthase (glutamine-hydrolyzing)	92.1	13.0	53.7
MGA_805	LOCUS_08020	sequence1:837013..837645(-)	internal_stop_codon	837670..837672(-)		WP_011203333.1	SDR family NAD(P)-dependent oxidoreductase	94.3	76.4	48.0
MGA_806	LOCUS_08030	sequence1:837670..837822(-)	internal_stop_codon	837670..837672(-)		WP_010918135.1	SDR family oxidoreductase	98.0	18.8	53.1
MGA_877	LOCUS_08740	sequence1:917494..917838(-)	partial			WP_003245823.1	protein-glutamate O-methylesterase CheB	84.2	26.9	50.0
MGA_878	LOCUS_08750	sequence1:918121..918432(-)	frameshift,internal_stop_codon	918120..918122(-)	918533	WP_011987036.1	chemotaxis response regulator protein-glutamate methylesterase	92.2	27.1	48.0
MGA_895	LOCUS_08920	sequence1:931890..933197(-)	partial			WP_003231973.1	flagellar hook-length control protein FliK	58.9	56.7	25.5
MGA_1072	LOCUS_10690	sequence1:1109125..1109661(+)	frameshift		1109125,1109094	WP_013531213.1	TSUP family transporter	92.7	64.4	27.7
MGA_1122	LOCUS_11190	sequence1:1155706..1156593(-)	frameshift		1155717	WP_083777716.1	3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase family protein	98.6	44.0	41.2
MGA_1166	LOCUS_11630	sequence1:1205200..1205739(-)	partial			WP_009966473.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	73.2	78.4	63.4
MGA_1229	LOCUS_12260	sequence1:1269274..1269828(-)	partial			WP_000122934.1	hypothetical protein	98.9	69.8	36.2
MGA_1269	LOCUS_12660	sequence1:1301362..1302540(-)	partial			WP_124797038.1	putative glycoside hydrolase	83.4	69.4	37.1
MGA_1284	LOCUS_12810	sequence1:1316995..1317942(-)	partial			WP_013528568.1	fumarylacetoacetate hydrolase family protein	66.3	74.7	48.1
MGA_1301	LOCUS_12980	sequence1:1334471..1334722(-)	partial			WP_003246542.1	glucose starvation-inducible protein GsiB	100.0	67.5	77.1
MGA_1374	LOCUS_13710	sequence1:1410438..1410848(-)	partial			WP_136699628.1	HIT family protein	65.4	50.3	33.7
MGA_1414	LOCUS_14110	sequence1:1446320..1447132(+)	partial			WP_000376159.1	DUF2515 domain-containing protein	94.8	68.9	32.8
MGA_1444	LOCUS_14410	sequence1:1479098..1479670(-)	partial			WP_012583758.1	YitT family protein	92.6	63.7	29.4
MGA_1455	LOCUS_14520	sequence1:1489447..1490079(-)	partial			WP_011727227.1	superoxide dismutase family protein	72.4	69.5	39.6
MGA_1466	LOCUS_14630	sequence1:1501430..1503643(-)	partial			WP_011461093.1	helix-turn-helix domain-containing protein	42.6	75.7	29.1
MGA_1476	LOCUS_14730	sequence1:1512412..1512897(+)	partial			WP_004398771.1	bifunctional GNAT family N-acetyltransferase/GrpB family protein	100.0	48.1	38.8
MGA_1502	LOCUS_14990	sequence1:1533573..1533848(+)	frameshift,internal_stop_codon	1533981..1533983(+),1533846..1533848(+)	1533863	WP_001098240.1	sodium/solute symporter	100.0	17.6	78.0
MGA_1503	LOCUS_15000	sequence1:1533983..1534858(+)	frameshift,internal_stop_codon	1533981..1533983(+),1533846..1533848(+)	1534667,1533863	WP_001098240.1	sodium/solute symporter	81.1	46.3	64.0
MGA_1504	LOCUS_15010	sequence1:1534750..1535010(+)	frameshift		1534666	WP_001098240.1	sodium/solute symporter	100.0	16.7	57.0
MGA_1516	LOCUS_15130	sequence1:1547812..1548114(-)	frameshift,internal_stop_codon	1548213..1548215(-)	1548257	WP_003811063.1	DUF2848 domain-containing protein	81.0	33.9	37.0
MGA_1519	LOCUS_15160	sequence1:1549801..1550289(-)	partial			WP_012582866.1	GntR family transcriptional regulator	95.7	68.3	28.4
MGA_1520	LOCUS_15170	sequence1:1550622..1550807(-)	partial			WP_011674592.1	response regulator transcription factor	67.2	18.3	51.2
MGA_1533	LOCUS_15300	sequence1:1561332..1561574(-)	partial			WP_005802478.1	MFS transporter	68.8	12.2	47.3
MGA_1557	LOCUS_15540	sequence1:1582923..1583216(-)	partial			WP_001195144.1	bifunctional lysozyme/C40 family peptidase	79.4	20.8	50.0
MGA_1558	LOCUS_15550	sequence1:1583225..1583461(-)	frameshift		1583248	WP_009966633.1	bifunctional lytic transglycosylase/C40 family peptidase	71.8	17.3	49.1
MGA_1583	LOCUS_15800	sequence1:1607190..1608158(-)	partial			WP_011948973.1	M14 family metallopeptidase	87.3	67.1	34.1
MGA_1621	LOCUS_16180	sequence1:1645971..1647512(-)	frameshift		1647517	WP_000254889.1	APC family permease	100.0	84.4	83.2
MGA_1622	LOCUS_16190	sequence1:1647491..1647796(-)	frameshift		1647517	WP_062822707.1	APC family permease	92.1	15.3	87.1
MGA_1640	LOCUS_16370	sequence1:1665546..1666811(-)	internal_stop_codon	1666827..1666829(-)		WP_071743885.1	nucleoside-diphosphate sugar epimerase/dehydratase	99.0	69.3	66.0
MGA_1641	LOCUS_16380	sequence1:1666827..1667357(-)	internal_stop_codon	1666827..1666829(-)		WP_071743885.1	nucleoside-diphosphate sugar epimerase/dehydratase	100.0	29.5	47.2
MGA_1648	LOCUS_16450	sequence1:1673624..1675777(-)	partial			WP_010989523.1	hypothetical protein	56.9	51.8	30.0
MGA_1670	LOCUS_16670	sequence1:1698453..1699679(-)	frameshift		1698490,1698899,1698863	WP_003243180.1	FUSC family protein	91.4	59.0	37.7
MGA_1674	LOCUS_16710	sequence1:1703905..1705134(+)	partial			WP_011267282.1	alpha/beta hydrolase	70.2	83.4	43.3
MGA_1693	LOCUS_16900	sequence1:1729143..1729349(-)	internal_stop_codon	1729143..1729145(-)		WP_010965776.1	DNA topology modulation protein	97.1	36.7	47.0
MGA_1703	LOCUS_17000	sequence1:1741259..1741501(-)	frameshift,internal_stop_codon	1741503..1741505(-)	1741697,1741586	WP_205161317.1	S-layer family protein	100.0	6.9	67.1
MGA_1732	LOCUS_17290	sequence1:1772806..1773276(-)	partial			WP_014328891.1	hypothetical protein	67.3	79.8	42.9
MGA_1744	LOCUS_17410	sequence1:1784221..1784514(-)	frameshift		1784259,1784246	WP_011228393.1	PaaI family thioesterase	82.5	52.2	56.1
MGA_1746	LOCUS_17430	sequence1:1784861..1786651(-)	partial			WP_164930053.1	glycosyltransferase family 4 protein	57.2	45.9	25.1
MGA_1767	LOCUS_17640	sequence1:1804944..1805279(-)	partial			WP_000649088.1	zinc-dependent alcohol dehydrogenase	97.3	28.4	68.5
MGA_1771	LOCUS_17680	sequence1:1808272..1808697(-)	partial			WP_000432117.1	ABC transporter permease	99.3	49.6	66.4
MGA_1772	LOCUS_17690	sequence1:1808649..1809053(-)	frameshift		1809099	WP_000218576.1	ABC transporter ATP-binding protein	81.3	43.4	65.1
MGA_1773	LOCUS_17700	sequence1:1809013..1809396(-)	frameshift		1809099	WP_000218627.1	ABC transporter ATP-binding protein	81.9	43.8	55.5
MGA_1776	LOCUS_17730	sequence1:1811829..1812416(-)	partial			WP_000428230.1	PRK06770 family protein	58.5	61.0	42.1
MGA_1785	LOCUS_17820	sequence1:1820136..1820753(-)	partial			WP_000459802.1	collagen-like protein	75.6	52.5	82.6
MGA_1786	LOCUS_17830	sequence1:1821173..1821580(-)	internal_stop_codon	1821671..1821673(-)		WP_012583825.1	site-specific tyrosine recombinase XerD	90.4	41.6	31.5
MGA_1797	LOCUS_17920	sequence1:1836973..1837338(+)	partial			WP_003244690.1	acyl-CoA thioesterase	99.2	69.8	55.0
MGA_1813	LOCUS_18080	sequence1:1856241..1856495(-)	partial			WP_009968853.1	YgaB family protein	95.2	70.2	48.8
MGA_1843	LOCUS_18380	sequence1:1883926..1884888(-)	partial			WP_011392212.1	PAS domain S-box protein	90.9	33.0	28.3
MGA_1850	LOCUS_18450	sequence1:1888839..1889318(-)	partial			WP_011461892.1	C40 family peptidase	86.2	48.7	39.4
MGA_1852	LOCUS_18470	sequence1:1890109..1890399(-)	internal_stop_codon	1890403..1890405(-)		WP_012047975.1	ABC transporter ATP-binding protein	75.0	25.3	38.9
MGA_1913	LOCUS_19080	sequence1:1951314..1951958(-)	internal_stop_codon	1952001..1952003(-),1952016..1952018(-)		WP_003896718.1	amino acid ABC transporter substrate-binding protein/permease	98.6	45.1	47.9
MGA_1914	LOCUS_19090	sequence1:1952016..1952792(-)	internal_stop_codon	1952001..1952003(-),1952016..1952018(-)		WP_010963438.1	amino acid ABC transporter substrate-binding protein/permease	95.3	51.8	52.8
MGA_1922	LOCUS_19170	sequence1:1960085..1960240(-)	frameshift		1960241	WP_014207979.1	urocanate hydratase	100.0	9.2	68.6
MGA_1923	LOCUS_19180	sequence1:1960785..1961153(+)	frameshift		1961150	WP_003242502.1	potassium channel protein KbfO	88.5	33.8	33.3
MGA_1924	LOCUS_19190	sequence1:1961246..1961815(+)	frameshift		1961150	WP_124219794.1	potassium channel family protein	96.8	53.9	35.6
MGA_1933	LOCUS_19280	sequence1:1971055..1971423(-)	partial			WP_000434719.1	hypothetical protein	92.6	26.8	57.5
MGA_1970	LOCUS_19650	sequence1:2004202..2004849(-)	partial			WP_000468974.1	bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II	99.1	53.7	68.1
MGA_1991	LOCUS_19860	sequence1:2032319..2032879(+)	partial			WP_003226754.1	ubiquitin-like domain-containing protein	50.0	21.3	66.7
MGA_2063	LOCUS_20580	sequence1:2108290..2110446(-)	partial			WP_004399034.1	LXG family T7SS effector endonuclease toxin YqcG	53.5	72.3	45.5
MGA_2068	LOCUS_20630	sequence1:2114227..2115840(+)	partial			WP_012257267.1	response regulator	72.6	51.4	30.4
MGA_2076	LOCUS_20710	sequence1:2122067..2123698(+)	partial			WP_000584284.1	PAS domain S-box protein	87.7	60.2	34.0
MGA_2096	LOCUS_20910	sequence1:2141082..2141717(-)	partial			WP_003429405.1	YitT family protein	83.9	62.2	27.4
MGA_2133	LOCUS_21260	sequence1:2183959..2184573(-)	partial			WP_003243812.1	MFS transporter	95.6	49.2	60.5
MGA_2145	LOCUS_21360	sequence1:2201451..2203151(-)	partial			WP_003242683.1	DUF4129 domain-containing transglutaminase family protein	96.6	74.8	38.9
MGA_2163	LOCUS_21540	sequence1:2228312..2228875(-)	partial			WP_003244298.1	iron chelate uptake ABC transporter family permease subunit	98.9	55.1	56.2
MGA_2178	LOCUS_21690	sequence1:2246849..2247169(-)	partial			WP_064243016.1	GntR family transcriptional regulator	99.1	45.8	35.2
MGA_2191	LOCUS_21820	sequence1:2260511..2262682(+)	partial			WP_003243620.1	SpoIID/LytB domain-containing protein	45.2	46.2	44.1
MGA_2226	LOCUS_22140	sequence1:2297968..2299119(+)	partial			WP_003228290.1	phosphoserine phosphatase RsbP	57.7	53.1	32.1
MGA_2230	LOCUS_22180	sequence1:2303084..2303839(+)	partial			WP_064496768.1	class I SAM-dependent methyltransferase	46.6	44.2	38.5
MGA_2263	LOCUS_22470	sequence1:2347879..2348280(+)	frameshift		2348351	WP_001173042.1	iron ABC transporter permease	99.2	39.4	87.1
MGA_2289	LOCUS_22730	sequence1:2373250..2374884(-)	partial			WP_011027970.1	PucR family transcriptional regulator	28.7	28.5	33.3
MGA_2299	LOCUS_22830	sequence1:2386718..2388412(-)	partial			WP_011460093.1	methyl-accepting chemotaxis protein	72.7	60.9	27.3
MGA_2301	LOCUS_22850	sequence1:2389804..2390319(-)	partial			WP_011861475.1	VanZ family protein	84.2	40.4	31.3
MGA_2472	LOCUS_24480	sequence1:2560593..2561132(-)	frameshift		2561188	WP_010966912.1	HD-GYP domain-containing protein	87.2	43.9	38.5
MGA_2525	LOCUS_25010	sequence1:2621992..2622576(+)	partial			WP_010904088.1	GNAT family N-acetyltransferase	87.1	72.5	42.7
MGA_2545	LOCUS_25210	sequence1:2644024..2644992(+)	partial			WP_003722722.1	HlyD family secretion protein	52.5	78.7	43.5
MGA_2576	LOCUS_25520	sequence1:2677289..2677825(+)	partial			WP_011948016.1	serine O-acetyltransferase	88.2	74.2	39.4
MGA_2594	LOCUS_25700	sequence1:2697905..2698528(+)	partial			WP_010886923.1	histidine phosphatase family protein	72.0	74.5	32.0
MGA_2600	LOCUS_25760	sequence1:2701545..2701772(+)	frameshift		2701448,2701499,2701412	WP_005765159.1	GntP family permease	74.7	12.4	64.3
MGA_2620	LOCUS_25960	sequence1:2718138..2718653(-)	partial			WP_003227448.1	spore coat protein GerQ	64.9	59.7	64.9
MGA_2646	LOCUS_26220	sequence1:2747429..2748013(+)	partial			WP_003243661.1	DNA-directed RNA polymerase subunit delta	44.8	50.3	54.0
MGA_2660	LOCUS_26360	sequence1:2761606..2762541(+)	partial			WP_003227654.1	stage II sporulation protein R	55.3	76.8	55.2
MGA_2673	LOCUS_26490	sequence1:2774033..2774257(+)	partial			WP_000052064.1	F0F1 ATP synthase subunit C	73.0	75.0	81.5
MGA_2682	LOCUS_26580	sequence1:2781022..2782176(+)	partial			WP_000070263.1	NADH-quinone oxidoreductase subunit C	46.9	44.1	56.6
MGA_2695	LOCUS_26710	sequence1:2794417..2794842(-)	partial			WP_011227905.1	VanZ family protein	71.6	77.7	34.7
MGA_2712	LOCUS_26880	sequence1:2809255..2812992(+)	partial			WP_011674840.1	PII-type proteinase	75.8	50.1	31.8
MGA_2725	LOCUS_27010	sequence1:2827724..2829793(+)	partial			WP_003243620.1	SpoIID/LytB domain-containing protein	55.7	53.5	40.3
MGA_2736	LOCUS_27120	sequence1:2845120..2846658(+)	partial			WP_002370472.1	glycosyltransferase family A protein	44.1	46.5	31.3
MGA_2737	LOCUS_27130	sequence1:2846771..2848003(+)	partial			WP_003243463.1	teichoic acid poly(glycerol phosphate) polymerase	95.4	52.1	63.2
MGA_2766	LOCUS_27420	sequence1:2874316..2874678(+)	partial			WP_009968250.1	flagellar protein FlaG	60.8	67.0	58.9
MGA_2780	LOCUS_27560	sequence1:2886753..2888150(+)	partial			WP_000721649.1	SH3 domain-containing protein	27.3	22.5	63.8
MGA_2800	LOCUS_27760	sequence1:2912075..2912713(-)	partial			WP_012047728.1	class D sortase	65.6	68.1	56.8
MGA_2848	LOCUS_28240	sequence1:2961315..2961962(+)	partial			WP_003231271.1	two-component sensor histidine kinase DesK	98.1	57.0	58.8
MGA_2850	LOCUS_28260	sequence1:2962689..2963210(+)	partial			WP_000261262.1	peptide-methionine (R)-S-oxide reductase MsrB	98.3	53.0	65.3
MGA_2863	LOCUS_28390	sequence1:2978823..2979443(-)	partial			WP_066872391.1	RraA family protein	77.2	70.0	40.9
MGA_2876	LOCUS_28520	sequence1:2992638..2993561(+)	partial			WP_003229064.1	manganese ABC transporter permease MntC	94.1	66.4	54.7
MGA_2916	LOCUS_28920	sequence1:3029854..3030768(+)	partial			WP_010966937.1	L,D-transpeptidase	64.1	64.3	41.0
MGA_2920	LOCUS_28960	sequence1:3034450..3034686(-)	frameshift		3034690	WP_010886606.1	NifU family protein	83.3	58.6	89.2
MGA_2923	LOCUS_28990	sequence1:3036697..3036867(+)	partial			WP_003222913.1	YuzB family protein	100.0	71.8	62.5
MGA_2965	LOCUS_29410	sequence1:3070903..3071256(-)	partial			WP_009897047.1	helix-turn-helix domain-containing protein	75.2	52.1	33.0
MGA_2979	LOCUS_29550	sequence1:3084248..3085099(+)	frameshift		3085069	WP_004198965.1	MFS transporter	96.1	63.6	47.1
MGA_2982	LOCUS_29580	sequence1:3085924..3086787(+)	partial			WP_011392985.1	STAS domain-containing protein	66.6	77.9	28.9
MGA_2992	LOCUS_29680	sequence1:3097853..3098716(+)	partial			WP_012256099.1	DUF4349 domain-containing protein	61.3	57.8	38.1
MGA_2994	LOCUS_29700	sequence1:3100446..3101603(-)	partial			WP_009968119.1	endonuclease I family protein	58.7	78.5	72.1
MGA_3000	LOCUS_29760	sequence1:3107789..3108115(-)	partial			WP_003229393.1	RNA-binding riboflavin kinase RibR	89.8	41.7	43.3
MGA_3013	LOCUS_29890	sequence1:3118089..3119555(+)	partial			WP_000584288.1	PAS domain S-box protein	94.7	59.4	39.2
MGA_3020	LOCUS_29960	sequence1:3124852..3125799(+)	frameshift		3125760	WP_012775668.1	IS110 family transposase	95.9	77.5	46.5
MGA_3027	LOCUS_30030	sequence1:3133356..3133550(-)	partial			WP_003234907.1	metalloregulator ArsR/SmtB family transcription factor	100.0	64.0	76.6
MGA_3034	LOCUS_30100	sequence1:3141082..3141249(+)	partial			WP_004398698.1	alanine/glycine:cation symporter family protein	76.4	10.3	58.0
MGA_3081	LOCUS_30540	sequence1:3189478..3190794(+)	partial			WP_012582957.1	glycosyltransferase family 4 protein	70.1	85.0	28.1
MGA_3113	LOCUS_30860	sequence1:3228320..3228499(+)	frameshift,internal_stop_codon	3228513..3228515(+)	3228488,3228281	WP_010965897.1	cytidine deaminase	83.1	35.3	63.3
MGA_3122	LOCUS_30950	sequence1:3236908..3237606(+)	partial			WP_011250526.1	TrkA C-terminal domain-containing protein	53.4	47.9	34.7
MGA_3131	LOCUS_31040	sequence1:3246776..3247522(+)	partial			WP_011462272.1	ethanolamine ammonia-lyase subunit EutC	92.7	74.7	53.9
MGA_3163	LOCUS_31360	sequence1:3274016..3274555(+)	partial			WP_004398771.1	bifunctional GNAT family N-acetyltransferase/GrpB family protein	97.8	50.7	48.0
MGA_3171	LOCUS_31440	sequence1:3280626..3280931(-)	partial			WP_003227771.1	MarR family transcriptional regulator	86.1	63.5	37.9
MGA_3174	LOCUS_31470	sequence1:3282582..3283061(+)	partial			WP_141403328.1	YjdJ family protein	59.7	82.6	35.8
MGA_3198	LOCUS_31710	sequence1:3310820..3311539(-)	partial			WP_011056556.1	pentapeptide repeat-containing protein	63.2	34.7	23.7
MGA_3220	LOCUS_31930	sequence1:3335545..3338355(+)	partial			WP_169800512.1	5'-nucleotidase C-terminal domain-containing protein	59.1	70.8	67.4
MGA_3221	LOCUS_31940	sequence1:3338410..3342741(+)	partial			WP_086395912.1	DUF6359 domain-containing protein	44.0	79.8	45.3
MGA_3236	LOCUS_32090	sequence1:3356720..3357250(-)	partial			WP_013227258.1	PadR family transcriptional regulator	65.3	62.0	29.6
MGA_3237	LOCUS_32100	sequence1:3357297..3358478(-)	partial			WP_000475839.1	DUF3533 domain-containing protein	69.5	71.2	23.9
MGA_3254	LOCUS_32270	sequence1:3373813..3374760(-)	frameshift		3373851	WP_012775668.1	IS110 family transposase	95.9	77.5	46.5
MGA_3258	LOCUS_32310	sequence1:3378878..3379138(+)	frameshift,internal_stop_codon	3378875..3378877(+),3379082..3379084(+)	3379075,3379150	WP_028402264.1	IS6 family transposase	74.4	27.2	79.7
MGA_3259	LOCUS_32320	sequence1:3379155..3379346(+)	frameshift,internal_stop_codon	3378875..3378877(+),3379082..3379084(+)	3379075,3379150	WP_028402264.1	IS6 family transposase	79.4	21.3	54.0
MGA_3262	LOCUS_32350	sequence1:3381961..3382158(+)	partial			WP_003229036.1	NAD-dependent epimerase/dehydratase family protein	92.3	18.0	55.0
MGA_3271	LOCUS_32440	sequence1:3391731..3392129(+)	partial			WP_004398700.1	cysteine hydrolase family protein	97.7	69.0	86.8
MGA_3272	LOCUS_32450	sequence1:3392297..3393055(+)	partial			WP_010932106.1	carbon-nitrogen hydrolase	97.2	48.2	27.6
MGA_3287	LOCUS_32600	sequence1:3406742..3407761(+)	partial			WP_048064452.1	MBL fold metallo-hydrolase	54.9	77.4	33.7
MGA_3322	LOCUS_32950	sequence1:3443729..3444301(+)	partial			WP_015776609.1	peptidoglycan-binding protein	75.3	39.5	40.1
MGA_3357	LOCUS_33300	sequence1:3469745..3470101(+)	partial			WP_009966666.1	DoxX family protein	71.2	74.6	35.3
MGA_3358	LOCUS_33310	sequence1:3470132..3470899(+)	partial			WP_005766806.1	pirin family protein	67.5	72.5	31.5
MGA_3375	LOCUS_33480	sequence1:3483165..3483962(-)	partial			WP_003231267.1	3D domain-containing protein	49.8	46.0	53.0
MGA_3390	LOCUS_33630	sequence1:3494661..3496178(-)	partial			WP_012868996.1	glycosyl hydrolase family 18 protein	57.6	60.3	40.3
MGA_3417	LOCUS_33900	sequence1:3521301..3521774(+)	partial			WP_001101673.1	NAD(P)H-dependent oxidoreductase	91.7	74.9	41.7
MGA_3470	LOCUS_34430	sequence1:3582508..3583197(-)	partial			WP_002666641.1	response regulator transcription factor	32.3	36.8	37.8
MGA_3495	LOCUS_34680	sequence1:3607327..3607950(+)	partial			WP_011969921.1	cupin domain-containing protein	84.1	52.0	33.7
MGA_3533	LOCUS_35060	sequence1:3643349..3643735(+)	partial			WP_011173648.1	DUF192 domain-containing protein	85.9	73.5	56.8
MGA_3543	LOCUS_35160	sequence1:3651169..3651756(-)	partial			WP_013529654.1	SET domain-containing protein-lysine N-methyltransferase	49.2	77.3	35.4
MGA_3550	LOCUS_35230	sequence1:3656432..3656707(-)	partial			WP_010966015.1	hypothetical protein	87.9	43.3	37.4
MGA_3556	LOCUS_35290	sequence1:3661882..3662325(+)	partial			WP_003246419.1	helix-turn-helix domain-containing GNAT family N-acetyltransferase	86.4	41.6	39.4
MGA_3573	LOCUS_35460	sequence1:3676547..3676993(+)	partial			WP_003243881.1	ATP-dependent zinc metalloprotease FtsH	77.0	17.1	40.4
MGA_3607	LOCUS_35800	sequence1:3710832..3711581(+)	partial			WP_013095679.1	methionine ABC transporter ATP-binding protein MetN	86.3	63.8	58.0
MGA_3610	LOCUS_35830	sequence1:3713465..3715249(+)	partial			WP_004399481.1	LXG family T7SS effector ribonuclease toxin YobL	73.9	74.7	42.4
MGA_3613	LOCUS_35860	sequence1:3716407..3716814(+)	frameshift		3716772	WP_208814654.1	SecY-interacting protein Syd	94.1	74.1	52.8
MGA_3620	LOCUS_35930	sequence1:3721870..3722214(+)	partial			WP_001171464.1	hypothetical protein	55.3	69.8	50.8
MGA_3623	LOCUS_35960	sequence1:3723484..3723690(+)	partial			WP_208814654.1	SecY-interacting protein Syd	64.7	25.3	59.1
MGA_3657	LOCUS_36300	sequence1:3756595..3757764(+)	partial			WP_001252638.1	D-alanyl-D-alanine carboxypeptidase DacB	69.4	71.1	39.4
MGA_3686	LOCUS_36590	sequence1:3783136..3784053(+)	partial			WP_009966473.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	41.0	73.1	45.1
MGA_3687	LOCUS_36600	sequence1:3784285..3784620(-)	partial			WP_011028300.1	GNAT family N-acetyltransferase	100.0	52.1	43.2
MGA_3698	LOCUS_36710	sequence1:3795036..3795839(+)	frameshift		3795770	WP_003732937.1	amino acid permease	83.1	45.7	69.8
MGA_3699	LOCUS_36720	sequence1:3796100..3796531(+)	partial			WP_001083374.1	amino acid permease	95.1	28.1	65.7
MGA_3711	LOCUS_36840	sequence1:3813102..3813725(+)	partial			WP_003808075.1	alpha/beta hydrolase	60.4	44.6	40.6
MGA_3737	LOCUS_37100	sequence1:3843756..3844316(+)	partial			WP_015776667.1	L,D-transpeptidase family protein	60.8	46.1	38.0
MGA_3787	LOCUS_37600	sequence1:3895100..3895897(+)	frameshift,internal_stop_codon	3895880..3895882(+)	3895876	WP_013532689.1	ABC transporter ATP-binding protein	96.6	48.6	43.9
MGA_3870	LOCUS_38430	sequence1:3971978..3972730(+)	partial			WP_011183409.1	ABC transporter ATP-binding protein	92.0	66.3	47.0
MGA_3889	LOCUS_38620	sequence1:3992806..3993423(+)	partial			WP_012258837.1	phosphonate C-P lyase system protein PhnH	61.0	58.3	33.8
MGA_3912	LOCUS_38850	sequence1:4012941..4013897(+)	partial			WP_011461044.1	cell wall-binding repeat-containing protein	44.3	23.2	34.9
MGA_3913	LOCUS_38860	sequence1:4013912..4014829(+)	partial			WP_011674154.1	DUF5011 domain-containing protein	97.4	55.6	38.0
MGA_3940	LOCUS_39130	sequence1:4037145..4039985(+)	partial			WP_000888064.1	DNA translocase FtsK	82.6	61.1	49.6
MGA_3944	LOCUS_39170	sequence1:4043529..4044101(+)	partial			WP_004398549.1	YtxH domain-containing protein	56.3	70.2	47.7
MGA_3972	LOCUS_39450	sequence1:4076503..4078170(+)	partial			WP_011392246.1	sigma-54-dependent Fis family transcriptional regulator	38.0	33.0	30.2
MGA_3977	LOCUS_39500	sequence1:4082937..4083479(+)	partial			WP_003229340.1	RDD family protein	72.8	80.5	50.0
MGA_4034	LOCUS_40070	sequence1:4141448..4142017(+)	partial			WP_003229468.1	TVP38/TMEM64 family protein	72.5	64.3	30.5
MGA_4077	LOCUS_40500	sequence1:4186051..4186224(+)	frameshift,internal_stop_codon	4186477..4186479(+),4186222..4186224(+)	4186275	WP_003227595.1	dihydrofolate reductase family protein	59.6	19.5	70.6
MGA_4089	LOCUS_40620	sequence1:4197586..4199082(+)	partial			WP_011202083.1	HNH endonuclease	19.5	45.8	37.3
MGA_4123	LOCUS_40960	sequence1:4234144..4235553(+)	partial			WP_000179738.1	stage VI sporulation protein D	53.1	76.9	36.4
MGA_4129	LOCUS_41020	sequence1:4243955..4244470(+)	partial			WP_010886586.1	A24 family peptidase	97.7	67.3	45.5
MGA_4140	LOCUS_41130	sequence1:4253381..4253992(+)	partial			WP_004398649.1	stage IV sporulation intramembrane metalloprotease SpoIVFB	100.0	70.5	42.9
MGA_4145	LOCUS_41180	sequence1:4257178..4257729(+)	partial			WP_001037006.1	sporulation initiation phosphotransferase B	69.4	67.6	36.2
MGA_4156	LOCUS_41290	sequence1:4268362..4270980(+)	partial			WP_000690750.1	SafA/ExsA family spore coat assembly protein	14.7	22.9	46.6
MGA_4166	LOCUS_41390	sequence1:4277853..4278224(-)	partial			WP_003229729.1	TIGR04086 family membrane protein	91.1	74.7	41.1
MGA_4181	LOCUS_41540	sequence1:4298340..4298636(+)	partial			WP_011727461.1	ABC transporter ATP-binding protein	96.9	33.3	61.1
MGA_4194	LOCUS_41670	sequence1:4312089..4313972(+)	partial			WP_003244653.1	cell wall-associated protease WprA	73.2	54.3	33.9
MGA_4211	LOCUS_41840	sequence1:4329246..4330055(+)	partial			WP_010965474.1	glycosyltransferase	89.6	74.8	33.5
MGA_4216	LOCUS_41890	sequence1:4334107..4335366(+)	partial			WP_048066597.1	lipopolysaccharide biosynthesis protein	81.1	70.8	26.3
MGA_4217	LOCUS_41900	sequence1:4335943..4336125(-)	frameshift,internal_stop_codon	4335822..4335824(-),4335831..4335833(-),4335780..4335782(-),4335660..4335662(-),4335939..4335941(-)	4336223,4336136,4335707,4336286,4336175	WP_148335055.1	IS3 family transposase	100.0	18.3	68.3
MGA_4220	LOCUS_41930	sequence1:4340908..4342107(+)	partial			WP_010948635.1	nucleotidyltransferase family protein	58.9	72.6	27.8
MGA_4230	LOCUS_42030	sequence1:4356268..4356522(+)	partial			WP_164928959.1	ABC transporter ATP-binding protein	89.3	12.4	60.0
MGA_4245	LOCUS_42180	sequence1:4370837..4371610(+)	partial			WP_011948221.1	TPM domain-containing protein	79.8	74.1	35.9
MGA_4340	LOCUS_43130	sequence1:4459222..4459689(+)	partial			WP_010886568.1	DUF308 domain-containing protein	70.3	84.5	45.0
MGA_4374	LOCUS_43470	sequence1:4490601..4491047(+)	partial			WP_011110378.1	competence type IV pilus assembly protein ComGB	98.6	42.3	34.9
MGA_4389	LOCUS_43620	sequence1:4502409..4504979(+)	partial			WP_011339403.1	adenosylcobalamin-dependent ribonucleoside-diphosphate reductase	47.9	49.3	35.8
MGA_4448	LOCUS_44210	sequence1:4565165..4565983(+)	partial			WP_011144046.1	phytoene/squalene synthase family protein	68.4	55.1	35.3
MGA_4515	LOCUS_44880	sequence1:4628094..4628858(+)	partial			WP_004398603.1	LysM peptidoglycan-binding domain-containing protein	20.1	21.2	62.7
MGA_4586	LOCUS_45590	sequence1:4697907..4698245(+)	partial			WP_000817366.1	DUF485 domain-containing protein	73.2	72.6	45.1
MGA_4593	LOCUS_45660	sequence1:4704759..4706027(+)	frameshift		4706009	WP_011229060.1	4-hydroxyphenylacetate 3-hydroxylase N-terminal domain-containing protein	98.1	81.2	52.6
MGA_4594	LOCUS_45670	sequence1:4706015..4706290(+)	frameshift		4706009	WP_012257231.1	4-hydroxyphenylacetate 3-hydroxylase N-terminal domain-containing protein	83.5	14.3	59.2
MGA_4606	LOCUS_45790	sequence1:4718220..4718672(-)	partial			WP_011393982.1	Hsp20/alpha crystallin family protein	71.3	76.8	33.0
MGA_4633	LOCUS_46060	sequence1:4746621..4747499(+)	partial			WP_010966912.1	HD-GYP domain-containing protein	81.8	66.5	35.0
MGA_4638	LOCUS_46110	sequence1:4752211..4752645(+)	partial			WP_011142260.1	CsbD family protein	97.2	59.5	29.9
MGA_4640	LOCUS_46130	sequence1:4755376..4756350(+)	partial			WP_010878316.1	phosphoglycerate dehydrogenase	96.6	59.2	40.4
MGA_4652	LOCUS_46250	sequence1:4767987..4768433(-)	partial			WP_011987073.1	membrane protein	87.2	67.3	38.1
MGA_4684	LOCUS_46570	sequence1:4805202..4805558(+)	frameshift		4805483	WP_009902866.1	permease	71.2	18.1	44.0
MGA_4685	LOCUS_46580	sequence1:4805486..4806592(+)	frameshift		4805483	WP_009902866.1	permease	95.1	76.0	33.6
MGA_4703	LOCUS_46760	sequence1:4824295..4824558(-)	frameshift		4824348	WP_077210409.1	Tn3 family transposase	64.4	5.7	58.9
MGA_4708	LOCUS_46810	sequence1:4827812..4828156(-)	frameshift		4827814	WP_003899203.1	IS110 family transposase	93.9	48.9	42.6
MGA_4724	LOCUS_46970	sequence1:4844842..4848762(+)	partial			WP_025189858.1	glycoside hydrolase family 31 protein	94.8	68.3	39.2
MGA_4729	LOCUS_47020	sequence1:4852127..4852444(+)	frameshift		4852418,4852106	WP_003246601.1	transcriptional regulator LrpA	92.4	71.3	66.0
MGA_4732	LOCUS_47050	sequence1:4854859..4855416(-)	internal_stop_codon	4854859..4854861(-)		WP_002211863.1	MFS transporter	100.0	40.9	55.7
MGA_4733	LOCUS_47060	sequence1:4855454..4856197(+)	partial			WP_011460903.1	aspartate ammonia-lyase	93.1	48.4	39.6
MGA_4787	LOCUS_47600	sequence1:4905874..4906794(-)	frameshift		4905888	WP_012775668.1	IS110 family transposase	99.3	78.0	46.2
MGA_4830	LOCUS_48030	sequence1:4946881..4947723(+)	partial			WP_010989829.1	SGNH/GDSL hydrolase family protein	72.9	80.8	39.3
MGA_4845	LOCUS_48180	sequence1:4960212..4960526(+)	frameshift		4960496,4960629	WP_012775610.1	IS1595 family transposase	88.5	25.9	37.9
MGA_4846	LOCUS_48190	sequence1:4960669..4961142(+)	partial			WP_206871531.1	IS1595 family transposase	75.8	74.4	42.0
MGA_4853	LOCUS_48260	sequence1:4967654..4967956(-)	partial			WP_010865177.1	cupin domain-containing protein	67.0	38.6	45.6
MGA_4861	LOCUS_48340	sequence1:4975219..4975551(-)	partial			WP_000086363.1	heavy metal translocating P-type ATPase	99.1	15.4	69.7
MGA_4872	LOCUS_48450	sequence1:4986369..4988135(+)	partial			WP_003232333.1	two-component sensor histidine kinase KinC	38.8	53.0	32.9
MGA_4887	LOCUS_48600	sequence1:5002424..5002591(+)	partial			WP_002288531.1	DUF2188 domain-containing protein	89.1	33.1	75.5
MGA_4893	LOCUS_48660	sequence1:5006450..5006887(+)	partial			WP_001984077.1	FixH family protein	96.6	61.1	37.7
MGA_4894	LOCUS_48670	sequence1:5007335..5008081(+)	partial			WP_000747596.1	CAP domain-containing protein	69.4	63.3	67.8
MGA_4923	LOCUS_48960	sequence1:5042167..5042559(+)	internal_stop_codon	5042107..5042109(+)		WP_012775606.1	IS1595-like element ISSsu9 family transposase	83.1	31.1	38.9
MGA_4927	LOCUS_49000	sequence1:5044594..5045193(+)	partial			WP_003232442.1	cell wall hydrolase	64.8	62.0	48.1
MGA_4928	LOCUS_49010	sequence1:5045257..5045844(-)	partial			WP_010886880.1	DUF2087 domain-containing protein	35.9	64.2	44.3
MGA_4934	LOCUS_49070	sequence1:5051038..5051262(+)	partial			WP_000497991.1	hypothetical protein	100.0	47.7	47.3
MGA_4935	LOCUS_49080	sequence1:5051387..5051635(+)	internal_stop_codon	5051633..5051635(+)		WP_000623961.1	NUDIX hydrolase	96.3	50.3	48.1
MGA_4937	LOCUS_49100	sequence1:5051968..5052645(-)	frameshift		5052601	WP_011921673.1	IS110 family transposase	73.8	42.9	41.3
MGA_4938	LOCUS_49110	sequence1:5052572..5053135(-)	frameshift		5052601	WP_012775668.1	IS110 family transposase	70.1	34.0	47.0
MGA_4942	LOCUS_49150	sequence1:5055003..5055308(+)	partial			WP_011107747.1	aldo/keto reductase	98.0	35.6	71.7
MGA_4946	LOCUS_49190	sequence1:5057758..5058141(+)	partial			WP_000864370.1	aspartate/glutamate racemase family protein	86.6	48.2	39.1
MGA_4960	LOCUS_49330	sequence1:5070283..5070666(-)	frameshift		5070716	WP_011393538.1	spore germination protein	92.9	22.5	31.0
MGA_4961	LOCUS_49340	sequence1:5070714..5071553(-)	frameshift		5070731	WP_011947970.1	spore germination protein	98.9	57.9	30.7
MGA_4986	LOCUS_49590	sequence1:5097299..5097487(+)	partial			WP_000368275.1	MBL fold metallo-hydrolase	93.5	21.8	41.9
MGA_4987	LOCUS_49600	sequence1:5097596..5097850(+)	internal_stop_codon	5097848..5097850(+)		WP_000368275.1	MBL fold metallo-hydrolase	100.0	29.5	64.3
MGA_5041	LOCUS_50140	sequence1:5147371..5148066(+)	partial			WP_010931906.1	DUF616 domain-containing protein	85.7	70.5	36.4
MGA_5046	LOCUS_50190	sequence1:5152596..5153726(+)	partial			WP_012257612.1	glycosyltransferase	98.7	34.8	26.1
MGA_5050	LOCUS_50230	sequence1:5157681..5158559(-)	partial			WP_003732671.1	glycosyltransferase family 2 protein	66.8	48.8	26.6
MGA_5051	LOCUS_50240	sequence1:5158740..5164232(-)	partial			WP_080388512.1	hyperosmolarity resistance protein Ebh	98.1	19.1	18.9
MGA_5065	LOCUS_50380	sequence1:5179474..5179833(-)	partial			WP_000765227.1	DUF2690 domain-containing protein	83.2	58.2	39.4
MGA_5066	LOCUS_50390	sequence1:5180342..5182600(+)	partial			WP_011181491.1	FN3 and LamG domain-containing metallophosphoesterase family protein	69.4	64.7	46.2
MGA_5071	LOCUS_50440	sequence1:5187442..5189100(-)	partial			WP_011461506.1	methyl-accepting chemotaxis protein	73.0	69.0	32.7
MGA_5083	LOCUS_50560	sequence1:5202376..5202636(+)	partial			WP_004199088.1	galactonate dehydratase	100.0	22.5	54.7
MGA_5087	LOCUS_50600	sequence1:5205551..5206414(+)	partial			WP_164922304.1	fumarylacetoacetate hydrolase family protein	75.6	73.5	53.0
MGA_5091	LOCUS_50640	sequence1:5208433..5209245(+)	frameshift		5209242	WP_011947957.1	nickel pincer cofactor biosynthesis protein LarC	99.6	64.3	41.3
MGA_5092	LOCUS_50650	sequence1:5209242..5209718(+)	frameshift		5209242	WP_011947957.1	nickel pincer cofactor biosynthesis protein LarC	86.7	31.9	43.8
MGA_5094	LOCUS_50670	sequence1:5210725..5211420(-)	partial			WP_003733747.1	DMT family transporter	98.7	71.8	46.7
MGA_5120	LOCUS_50930	sequence1:5241901..5242500(-)	partial			WP_011090806.1	3'-5' exonuclease	84.9	54.3	31.2
MGA_5123	LOCUS_50960	sequence1:5243894..5244520(-)	partial			WP_011393207.1	CAP domain-containing protein	59.1	50.2	61.8
MGA_5124	LOCUS_50970	sequence1:5244843..5245697(+)	internal_stop_codon	5245695..5245697(+)		WP_001049221.1	FAD-dependent oxidoreductase	99.6	71.0	49.1
MGA_5125	LOCUS_50980	sequence1:5245770..5246075(+)	internal_stop_codon	5245695..5245697(+)		WP_000365630.1	FAD-dependent oxidoreductase	91.1	22.2	45.7
MGA_5155	LOCUS_51280	sequence1:5273297..5274040(-)	partial			WP_011861655.1	cell wall-binding protein Cwp22	75.7	30.1	47.9
MGA_5161	LOCUS_51340	sequence1:5281580..5282266(-)	partial			WP_003131402.1	response regulator transcription factor	26.8	29.2	44.3
MGA_5176	LOCUS_51490	sequence1:5299531..5299842(+)	frameshift		5299409,5299803	WP_005479886.1	SDR family oxidoreductase	88.3	36.4	52.2
MGA_5206	LOCUS_51790	sequence1:5326940..5327386(+)	partial			WP_046212786.1	M56 family metallopeptidase	94.6	48.6	42.7
MGA_5213	LOCUS_51860	sequence1:5333573..5334661(-)	partial			WP_011142460.1	colanic acid biosynthesis glycosyltransferase WcaL	74.6	62.1	34.4
MGA_5219	LOCUS_51920	sequence1:5341675..5343567(+)	partial			WP_011142460.1	colanic acid biosynthesis glycosyltransferase WcaL	45.7	67.7	34.2
MGA_5223	LOCUS_51960	sequence1:5346889..5348097(+)	partial			WP_105217984.1	glycosyltransferase	69.9	76.8	34.4
MGA_5244	LOCUS_52170	sequence1:5369128..5369571(+)	partial			WP_005812744.1	C40 family peptidase	89.8	51.8	44.0
MGA_5246	LOCUS_52190	sequence1:5372548..5374467(+)	partial			WP_001167514.1	type I pullulanase	96.9	73.2	65.9
MGA_5247	LOCUS_52200	sequence1:5374636..5374839(+)	frameshift,internal_stop_codon	5374871..5374873(+)	5375081,5374818,5374996	WP_003245240.1	formate dehydrogenase subunit alpha	100.0	6.5	61.2
MGA_5248	LOCUS_52210	sequence1:5376067..5376288(+)	partial			WP_000468974.1	bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II	100.0	18.4	61.6
MGA_5274	LOCUS_52470	sequence1:5401147..5401743(-)	partial			WP_002358159.1	PucR family transcriptional regulator	79.8	29.7	29.2
MGA_5275	LOCUS_52480	sequence1:5401855..5402100(-)	frameshift,internal_stop_codon	5401855..5401857(-)	5402137	WP_011704606.1	sugar diacid recognition domain-containing protein	84.0	18.6	49.3
MGA_5278	LOCUS_52510	sequence1:5405125..5405991(-)	frameshift		5406013,5406175	WP_117288021.1	IS3 family transposase	98.3	71.1	53.0
MGA_5333	LOCUS_53060	sequence1:5468840..5469901(-)	partial			WP_003245779.1	sporulation kinase KinA	96.9	55.8	32.9
MGA_5339	LOCUS_53120	sequence1:5475635..5475871(-)	frameshift,internal_stop_codon	5475891..5475893(-)	5476050,5475875	WP_055295521.1	site-specific integrase	91.0	18.2	46.5
MGA_5349	LOCUS_53220	sequence1:5487577..5487837(-)	partial			WP_011030768.1	NAD(P)H-dependent oxidoreductase	61.6	28.6	49.1
MGA_5363	LOCUS_53360	sequence1:5501006..5501566(-)	partial			WP_003231283.1	lysozyme family protein	81.7	68.9	58.1
MGA_5368	LOCUS_53410	sequence1:5504807..5505457(-)	partial			WP_005464619.1	GntR family transcriptional regulator	77.3	72.2	28.7
MGA_5399	LOCUS_53720	sequence1:5540707..5540925(+)	partial			WP_000990233.1	YqaE/Pmp3 family membrane protein	69.4	71.4	72.0
MGA_5400	LOCUS_53730	sequence1:5541025..5543571(-)	partial			WP_011948968.1	helicase	48.3	69.6	39.3
MGA_5401	LOCUS_53740	sequence1:5544143..5545102(+)	partial			WP_003113216.1	EAL domain-containing protein	50.2	12.8	41.1
MGA_5411	LOCUS_53840	sequence1:5553691..5553897(+)	partial			WP_011392792.1	twin-arginine translocase TatA/TatE family subunit	69.1	64.4	66.0
MGA_5420	LOCUS_53930	sequence1:5564275..5564952(-)	partial			WP_009966473.1	peptidoglycan L-alanyl-D-glutamate endopeptidase CwlK	56.9	74.3	42.8
MGA_5435	LOCUS_54080	sequence1:5581013..5581729(-)	partial			WP_010963658.1	hypothetical protein	81.5	48.4	60.3
MGA_5437	LOCUS_54100	sequence1:5582990..5583526(-)	partial			WP_000378748.1	DNA/RNA non-specific endonuclease	91.0	71.3	38.1
MGA_5439	LOCUS_54120	sequence1:5584567..5584836(-)	internal_stop_codon	5584843..5584845(-)		WP_210043352.1	deaminase domain-containing protein	92.1	1.6	41.5
MGA_5443	LOCUS_54160	sequence1:5586755..5588842(-)	partial			WP_003243987.1	LXG family T7SS effector putative deaminase YwqJ	66.0	75.7	41.4
MGA_5465	LOCUS_54380	sequence1:5608774..5609043(-)	partial			WP_010918307.1	aldehyde dehydrogenase family protein	52.8	9.8	59.6
MGA_5479	LOCUS_54520	sequence1:5622943..5623317(-)	partial			WP_061183603.1	DUF3888 domain-containing protein	78.2	45.9	47.6
MGA_5480	LOCUS_54530	sequence1:5623559..5624710(-)	partial			WP_004399387.1	LD-carboxypeptidase LdcB	62.4	85.0	42.7
MGA_5482	LOCUS_54550	sequence1:5626517..5626759(-)	frameshift,internal_stop_codon	5626546..5626548(-),5626555..5626557(-)	5626425,5626301,5626582	WP_000738124.1	glycoside hydrolase	78.8	8.2	57.1
MGA_5489	LOCUS_54620	sequence1:5633283..5633591(-)	frameshift		5633644	WP_000666434.1	DinB family protein	97.1	56.9	47.5
MGA_5490	LOCUS_54630	sequence1:5633588..5633782(-)	frameshift		5633647	WP_003234141.1	damage-inducible protein DinB	81.2	32.6	46.4
MGA_5494	LOCUS_54670	sequence1:5636388..5637233(+)	frameshift,internal_stop_codon	5636389..5636391(+)	5636397	WP_012544973.1	IS110 family transposase	97.9	64.7	32.7
MGA_5495	LOCUS_54680	sequence1:5638557..5638808(-)	frameshift		5638279,5638339,5638972,5638567	WP_013224988.1	zinc-binding dehydrogenase	96.4	23.8	57.5
MGA_5496	LOCUS_54690	sequence1:5638949..5639101(-)	frameshift		5638972	WP_013224988.1	zinc-binding dehydrogenase	92.0	14.4	58.7