{
    "type": "genome",
    "identifier": "GCF_002245495.1",
    "organism": "Oceanimonas baumannii",
    "title": "Oceanimonas baumannii",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "University of New Hampshire - Manchester",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_002245495.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN06648058",
        "wgs_master": "NQJF00000000.1",
        "refseq_category": "na",
        "taxid": "129578",
        "species_taxid": "129578",
        "organism_name": "Oceanimonas baumannii",
        "infraspecific_name": "strain=ATCC 700832",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/08/10",
        "asm_name": "ASM224549v1",
        "asm_submitter": "University of New Hampshire - Manchester",
        "gbrs_paired_asm": "GCA_002245495.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/245/495/GCF_002245495.1_ASM224549v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3809332",
        "genome_size_ungapped": "3809332",
        "gc_percent": "56.000000",
        "replicon_count": "0",
        "scaffold_count": "70",
        "contig_count": "70",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_002245495.1-RS_2024_08_07",
        "annotation_date": "2024-08-07",
        "total_gene_count": "3641",
        "protein_coding_gene_count": "3516",
        "non_coding_gene_count": "97",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-08-10",
    "dateModified": "2017-08-10",
    "datePublished": "2017-08-10",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Oceanimonas baumannii"
        ],
        "sample_taxid": [
            "129578"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "United Kingdom: River Wear"
        ],
        "sample_host_location_id": [],
        "data_size": "1.079 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3809332",
        "Number of Sequences": "70",
        "Longest Sequences (bp)": "408079",
        "N50 (bp)": "232731",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "55.9",
        "Number of CDSs": "3537",
        "Average Protein Length": "318.8",
        "Coding Ratio (%)": "88.8",
        "Number of rRNAs": "7",
        "Number of tRNAs": "76",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Oceanimonas baumannii",
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                "relation_to_type": "type",
                "validated": true,
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            },
            {
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                "status": "conclusive"
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            {
                "organism_name": "Oceanimonas smirnovii",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Oceanimonas marisflavi",
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                "accession": "GCA_003049725.1",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Oceanimonas doudoroffii",
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                "accession": "GCA_002242685.1",
                "taxid": 84158,
                "species_taxid": 84158,
                "relation_to_type": "type",
                "validated": true,
                "ani": 83.282,
                "matched_fragments": 832,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Photobacterium salinisoli",
                "strain": "strain=LAM9072",
                "accession": "GCA_003614885.1",
                "taxid": 1616783,
                "species_taxid": 1616783,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.3381,
                "matched_fragments": 91,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas aeruginosa",
                "strain": "strain=JCM 5962",
                "accession": "GCA_022496575.1",
                "taxid": 287,
                "species_taxid": 287,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0949,
                "matched_fragments": 56,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas aeruginosa",
                "strain": "strain=DSM 50071",
                "accession": "GCA_024169805.1",
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                "species_taxid": 287,
                "relation_to_type": "type",
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                "ani": 75.8495,
                "matched_fragments": 65,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas faucium",
                "strain": "strain=BML-PP048",
                "accession": "GCA_013373935.1",
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                "species_taxid": 2740518,
                "relation_to_type": "type",
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                "matched_fragments": 67,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pseudomonas faucium",
                "strain": "strain=BML-PP048",
                "accession": "GCA_021602585.1",
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                "relation_to_type": "type",
                "validated": true,
                "ani": 75.7116,
                "matched_fragments": 71,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "strain_heterogeneity": 0.0
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        "gtdb_result": [
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                "accession": "GCF_002245495.1",
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                "total_fragments": 1239,
                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Aeromonadaceae;g__Oceanimonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.99",
                "min_intra_species_ani": "99.99",
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            },
            {
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                "mean_intra_species_ani": "N/A",
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            },
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                "mean_intra_species_ani": "N/A",
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            },
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Aeromonadaceae;g__Zobellella_A",
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                "mean_intra_species_ani": "N/A",
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        ]
    },
    "_bac2feature": {
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        "bacillus_cell_shape": null,
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    },
    "_genome_taxon": [
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        "baumannii"
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}