{ "type": "genome", "identifier": "GCF_002245625.1", "organism": "Acidovorax kalamii", "title": "Acidovorax kalamii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Institute of Microbial Technology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002245625.1", "bioproject": "PRJNA224116", "biosample": "SAMN07156299", "wgs_master": "NOIG00000000.1", "refseq_category": "reference genome", "taxid": "2004485", "species_taxid": "2004485", "organism_name": "Acidovorax kalamii", "infraspecific_name": "strain=KNDSW-TSA6", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/08/10", "asm_name": "ASM224562v1", "asm_submitter": "Institute of Microbial Technology", "gbrs_paired_asm": "GCA_002245625.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/245/625/GCF_002245625.1_ASM224562v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5137998", "genome_size_ungapped": "5137904", "gc_percent": "65.500000", "replicon_count": "0", "scaffold_count": "31", "contig_count": "31", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002245625.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "4715", "protein_coding_gene_count": "4632", "non_coding_gene_count": "55", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-08-10", "dateModified": "2017-08-10", "datePublished": "2017-08-10", "_annotation": { "sample_count": 1, "sample_organism": [ "Acidovorax kalamii" ], "sample_taxid": [ "2004485" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": 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"GCA_900100305.1", "taxid": 80869, "species_taxid": 80869, "relation_to_type": "type", "validated": true, "ani": 81.4687, "matched_fragments": 840, "total_fragments": 1696, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax avenae subsp. avenae", "strain": "strain=ATCC 19860", "accession": "GCA_000176855.2", "taxid": 80870, "species_taxid": 80867, "relation_to_type": "suspected-type", "validated": true, "ani": 81.3854, "matched_fragments": 872, "total_fragments": 1696, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Acidovorax oryzae", "strain": "strain=ATCC 19882", "accession": "GCA_000687165.1", "taxid": 862720, "species_taxid": 862720, "relation_to_type": "type", "validated": true, "ani": 81.3759, "matched_fragments": 864, "total_fragments": 1696, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hydrogenophaga crocea", "strain": "strain=BA0156", "accession": "GCA_011388215.1", "taxid": 2716225, 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