{ "type": "genome", "identifier": "GCF_002245695.1", "organism": "Fictibacillus aquaticus", "title": "Fictibacillus aquaticus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Institute of Microbial Technology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002245695.1", "bioproject": "PRJNA224116", "biosample": "SAMN07357904", "wgs_master": "NOII00000000.1", "refseq_category": "na", "taxid": "2021314", "species_taxid": "2021314", "organism_name": "Fictibacillus aquaticus", "infraspecific_name": "strain=GDSW-R2A3", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/08/10", "asm_name": "ASM224569v1", "asm_submitter": "Institute of Microbial Technology", "gbrs_paired_asm": "GCA_002245695.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/245/695/GCF_002245695.1_ASM224569v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3900789", "genome_size_ungapped": "3900151", "gc_percent": "44.000000", "replicon_count": "0", "scaffold_count": "110", "contig_count": "110", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002245695.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "4105", "protein_coding_gene_count": "3971", "non_coding_gene_count": "81", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-08-10", "dateModified": "2017-08-10", "datePublished": "2017-08-10", "_annotation": { "sample_count": 1, "sample_organism": [ "Fictibacillus aquaticus" ], "sample_taxid": [ "2021314" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "India: Harsil" ], "sample_host_location_id": [], "data_size": "1.111 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 100.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3900789", "Number of Sequences": "110", "Longest Sequences (bp)": "1516339", "N50 (bp)": "737787", "Gap Ratio (%)": "0.018535", "GCcontent (%)": "44.2", "Number of CDSs": "3937", "Average Protein Length": "280.9", "Coding Ratio (%)": "85.1", "Number of rRNAs": "7", "Number of tRNAs": "68", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Fictibacillus aquaticus", "strain": "strain=GDSW-R2A3", "accession": "GCA_002245695.1", "taxid": 2021314, "species_taxid": 2021314, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1247, "total_fragments": 1248, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Fictibacillus barbaricus", "strain": "strain=DSM 14730", "accession": "GCA_017052555.1", "taxid": 182136, "species_taxid": 182136, "relation_to_type": "type", "validated": true, "ani": 77.896, "matched_fragments": 170, "total_fragments": 1248, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fictibacillus arsenicus", "strain": "strain=Con a/3", "accession": "GCA_001999465.1", "taxid": 255247, "species_taxid": 255247, "relation_to_type": "type", "validated": true, "ani": 77.8621, "matched_fragments": 193, "total_fragments": 1248, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fictibacillus halophilus", "strain": "strain=KCTC 33758", "accession": "GCA_016401385.1", "taxid": 1610490, "species_taxid": 1610490, "relation_to_type": "type", "validated": true, "ani": 77.7152, "matched_fragments": 184, "total_fragments": 1248, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fictibacillus norfolkensis", "strain": "strain=Sa2CUA10", "accession": "GCA_014836645.1", "taxid": 2762233, "species_taxid": 2762233, "relation_to_type": "type", "validated": true, "ani": 77.603, "matched_fragments": 193, "total_fragments": 1248, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fictibacillus enclensis", "strain": "strain=NIO-1003", "accession": "GCA_900094955.1", "taxid": 1017270, "species_taxid": 1017270, "relation_to_type": "type", "validated": true, "ani": 77.3356, "matched_fragments": 114, "total_fragments": 1248, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Fictibacillus enclensis", "strain": "strain=NIO-1003", "accession": "GCA_001457035.1", "taxid": 1017270, "species_taxid": 1017270, "relation_to_type": "type", "validated": true, "ani": 77.3356, "matched_fragments": 114, "total_fragments": 1248, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesobacillus subterraneus", "strain": "strain=DSM 13966", "accession": "GCA_003937825.1", "taxid": 285983, "species_taxid": 285983, "relation_to_type": "suspected-type", "validated": true, "ani": 76.5914, "matched_fragments": 68, "total_fragments": 1248, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Bacillus amyloliquefaciens", "strain": "strain=DSM 7", "accession": "GCA_000196735.1", "taxid": 1390, "species_taxid": 1390, "relation_to_type": "suspected-type", "validated": true, "ani": 76.2629, "matched_fragments": 51, "total_fragments": 1248, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 100.0 }, "gtdb_result": [ { "accession": "GCF_002245695.1", "gtdb_species": "s__Fictibacillus aquaticus", "ani": 100.0, "matched_fragments": 1248, "total_fragments": 1248, "gtdb_taxonomy": 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"spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Fictibacillus", "aquaticus" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }