{ "type": "genome", "identifier": "GCF_002251775.1", "organism": "Flavobacterium aurantiibacter", "title": "Flavobacterium aurantiibacter", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Nanjing Institute of Geography and Limnology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002251775.1", "bioproject": "PRJNA224116", "biosample": "SAMN07419339", "wgs_master": "NOXX00000000.1", "refseq_category": "reference genome", "taxid": "2023067", "species_taxid": "2023067", "organism_name": "Flavobacterium aurantiibacter", "infraspecific_name": "strain=TH167", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/08/14", "asm_name": "ASM225177v1", "asm_submitter": "Nanjing Institute of Geography and Limnology", "gbrs_paired_asm": "GCA_002251775.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/251/775/GCF_002251775.1_ASM225177v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3247176", "genome_size_ungapped": "3246888", "gc_percent": "40.500000", "replicon_count": "0", "scaffold_count": "228", "contig_count": "228", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002251775.1-RS_2024_10_22", "annotation_date": "2024-10-22", "total_gene_count": "2936", "protein_coding_gene_count": "2857", "non_coding_gene_count": "47", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-08-14", "dateModified": "2017-08-14", "datePublished": "2017-08-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Flavobacterium aurantiibacter" ], "sample_taxid": [ "2023067" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China: Lake Taihu" ], "sample_host_location_id": [], "data_size": "0.925 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3247176", "Number of Sequences": "228", "Longest Sequences (bp)": "109784", "N50 (bp)": "32579", "Gap Ratio (%)": "0.012288", "GCcontent (%)": "40.4", "Number of CDSs": "2803", "Average Protein Length": "326.7", "Coding Ratio (%)": "84.6", "Number of rRNAs": "2", "Number of tRNAs": "39", "Number of CRISPRs": "2" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Flavobacterium aurantiibacter", "strain": "strain=TH167", "accession": "GCA_002251775.1", "taxid": 2023067, "species_taxid": 2023067, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 953, "total_fragments": 970, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Flavobacterium saliperosum", "strain": "strain=CGMCC 1.3801", "accession": "GCA_900100625.1", "taxid": 329186, "species_taxid": 329186, "relation_to_type": "type", "validated": true, "ani": 77.331, "matched_fragments": 66, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium cauense", "strain": "strain=CGMCC 1.7270", "accession": "GCA_007830385.1", "taxid": 510946, "species_taxid": 510946, "relation_to_type": "type", "validated": true, "ani": 77.3167, "matched_fragments": 60, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium saliperosum", "strain": "strain=S13", "accession": "GCA_000498515.1", "taxid": 329186, "species_taxid": 329186, "relation_to_type": "type", "validated": true, "ani": 77.2716, "matched_fragments": 63, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium limnosediminis", "strain": "strain=JC2902", "accession": "GCA_000498535.1", "taxid": 1401027, "species_taxid": 1401027, "relation_to_type": "type", "validated": true, "ani": 77.2703, "matched_fragments": 71, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium amnicola", "strain": "strain=LLJ-11", "accession": "GCA_004122165.1", "taxid": 2506422, "species_taxid": 2506422, "relation_to_type": "type", "validated": true, "ani": 77.1802, "matched_fragments": 60, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium seoulense", "strain": "strain=EM1321", "accession": "GCA_000695795.1", "taxid": 1492738, "species_taxid": 1492738, "relation_to_type": "type", "validated": true, "ani": 77.0848, "matched_fragments": 66, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium lindanitolerans", "strain": "strain=DSM 21886", "accession": "GCA_003663835.1", "taxid": 428988, "species_taxid": 428988, "relation_to_type": "type", "validated": true, "ani": 77.072, "matched_fragments": 65, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium lindanitolerans", "strain": "strain=IP-10", "accession": "GCA_002846575.1", "taxid": 428988, "species_taxid": 428988, "relation_to_type": "type", "validated": true, "ani": 77.0643, "matched_fragments": 66, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium hibernum", "strain": "strain=ATCC 51468", "accession": "GCA_002217315.1", "taxid": 37752, "species_taxid": 37752, "relation_to_type": "type", "validated": true, "ani": 77.0622, "matched_fragments": 59, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium magnum", "strain": "strain=HYN0048", "accession": "GCA_003055625.1", "taxid": 2162713, "species_taxid": 2162713, "relation_to_type": "type", "validated": true, "ani": 77.0275, "matched_fragments": 57, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium sufflavum", "strain": "strain=BBQ-12", "accession": "GCA_004016525.1", "taxid": 1921138, "species_taxid": 1921138, "relation_to_type": "type", "validated": true, "ani": 76.9611, "matched_fragments": 60, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium pallidum", "strain": "strain=HYN0049", "accession": "GCA_003097535.1", "taxid": 2172098, "species_taxid": 2172098, "relation_to_type": "type", "validated": true, "ani": 76.89, "matched_fragments": 59, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium frigidimaris", "strain": "strain=DSM 15937", "accession": "GCA_002217275.1", "taxid": 262320, "species_taxid": 262320, "relation_to_type": "type", "validated": true, "ani": 76.8625, "matched_fragments": 65, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium soyae", "strain": "strain=SCIV07", "accession": "GCA_021245985.1", "taxid": 2903098, "species_taxid": 2903098, "relation_to_type": "type", "validated": true, "ani": 76.7803, "matched_fragments": 81, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium croceum", "strain": "strain=DSM 17960", "accession": "GCA_002917885.1", "taxid": 370975, "species_taxid": 370975, "relation_to_type": "type", "validated": true, "ani": 76.7499, "matched_fragments": 65, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium hydrocarbonoxydans", "strain": "strain=GA093", "accession": "GCA_009789235.1", "taxid": 2683249, "species_taxid": 2683249, "relation_to_type": "type", "validated": true, "ani": 76.7185, "matched_fragments": 72, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium noncentrifugens", "strain": "strain=NBRC 108844", "accession": "GCA_007992475.1", "taxid": 1128970, "species_taxid": 1128970, "relation_to_type": "type", "validated": true, "ani": 76.6942, "matched_fragments": 79, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium bizetiae", "strain": "strain=CIP 105534", "accession": "GCA_904425415.1", "taxid": 2704140, "species_taxid": 2704140, "relation_to_type": "type", "validated": true, "ani": 76.6757, "matched_fragments": 77, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium noncentrifugens", "strain": "strain=CGMCC 1.10076", "accession": "GCA_900100375.1", "taxid": 1128970, "species_taxid": 1128970, "relation_to_type": "type", "validated": true, "ani": 76.665, "matched_fragments": 80, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium bizetiae", "strain": "strain=CIP 105534", "accession": "GCA_902804475.1", "taxid": 2704140, "species_taxid": 2704140, "relation_to_type": "type", "validated": true, "ani": 76.6431, "matched_fragments": 77, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium pectinovorum", "strain": "strain=DSM 6368", "accession": "GCA_900142715.1", "taxid": 29533, "species_taxid": 29533, "relation_to_type": "type", "validated": true, "ani": 76.6194, "matched_fragments": 79, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium pectinovorum", "strain": "strain=ATCC 19366", "accession": "GCA_002217365.1", "taxid": 29533, "species_taxid": 29533, "relation_to_type": "type", "validated": true, "ani": 76.5939, "matched_fragments": 81, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Flavobacterium laiguense", "strain": "strain=LB2P30", "accession": "GCA_003097655.1", "taxid": 2169409, "species_taxid": 2169409, "relation_to_type": "type", "validated": true, "ani": 76.3677, "matched_fragments": 60, "total_fragments": 970, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002251775.1", "gtdb_species": "s__Flavobacterium aurantiibacter", "ani": 100.0, "matched_fragments": 952, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_006385255.1", "gtdb_species": "s__Flavobacterium microcysteis", "ani": 77.316, "matched_fragments": 62, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000498535.1", "gtdb_species": "s__Flavobacterium limnosediminis", "ani": 77.2703, "matched_fragments": 71, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002846575.1", "gtdb_species": "s__Flavobacterium lindanitolerans", "ani": 77.0643, "matched_fragments": 66, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.86", "min_intra_species_ani": "97.14", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.85", "num_clustered_genomes": 11, "status": "-" }, { "accession": "GCA_018267095.1", "gtdb_species": "s__Flavobacterium sp018267095", "ani": 77.0417, "matched_fragments": 83, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003055625.1", "gtdb_species": "s__Flavobacterium magnum", "ani": 77.0262, "matched_fragments": 56, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001429765.1", "gtdb_species": "s__Flavobacterium sp001429765", "ani": 76.9488, "matched_fragments": 71, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.48", "min_intra_species_ani": "98.48", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.97", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_000498495.1", "gtdb_species": "s__Flavobacterium enshiense", "ani": 76.9303, "matched_fragments": 67, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003097535.1", "gtdb_species": "s__Flavobacterium pallidum", "ani": 76.89, "matched_fragments": 59, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_014379405.1", "gtdb_species": "s__Flavobacterium sp014379405", "ani": 76.8794, "matched_fragments": 51, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016787805.1", "gtdb_species": "s__Flavobacterium sp016787805", "ani": 76.8519, "matched_fragments": 84, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011392125.1", "gtdb_species": "s__Flavobacterium lotistagni", "ani": 76.8432, "matched_fragments": 74, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_001800905.1", "gtdb_species": "s__Flavobacterium sp001800905", "ani": 76.8342, "matched_fragments": 66, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_002352205.1", "gtdb_species": "s__Flavobacterium sp002352205", "ani": 76.7849, "matched_fragments": 85, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.95", "min_intra_species_ani": "99.95", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004362015.1", "gtdb_species": "s__Flavobacterium sp004362015", "ani": 76.7607, "matched_fragments": 63, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000282055.1", "gtdb_species": "s__Flavobacterium sp000282055", "ani": 76.754, "matched_fragments": 58, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009789235.1", "gtdb_species": "s__Flavobacterium sp009789235", "ani": 76.7484, "matched_fragments": 71, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002917885.1", "gtdb_species": "s__Flavobacterium croceum", "ani": 76.7443, "matched_fragments": 64, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004339525.1", "gtdb_species": "s__Flavobacterium sp004339525", "ani": 76.7403, "matched_fragments": 68, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900100375.1", "gtdb_species": "s__Flavobacterium noncentrifugens", "ani": 76.6912, "matched_fragments": 79, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900142715.1", "gtdb_species": "s__Flavobacterium pectinovorum", "ani": 76.6194, "matched_fragments": 79, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.30", "min_intra_species_ani": "96.60", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.89", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_004349315.1", "gtdb_species": "s__Flavobacterium sp004349315", "ani": 76.6127, "matched_fragments": 60, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.48", "min_intra_species_ani": "98.48", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004362665.1", "gtdb_species": "s__Flavobacterium dankookense", "ani": 76.5733, "matched_fragments": 77, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003097655.1", "gtdb_species": "s__Flavobacterium laiguense", "ani": 76.3977, "matched_fragments": 59, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903902795.1", "gtdb_species": "s__Flavobacterium sp903902795", "ani": 76.3019, "matched_fragments": 91, "total_fragments": 970, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Flavobacteriales;f__Flavobacteriaceae;g__Flavobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.326, "cell_length": 0.278, "doubling_h": 1.271, "growth_tmp": 24.705, "optimum_tmp": 25.047, "optimum_ph": 7.141, "genome_size": 3988255.815, "gc_content": 34.893, "coding_genes": 3154.048, "rRNA16S_genes": 5.145, "tRNA_genes": 58.611, "gram_stain": 0.0, "sporulation": 0.0, "motility": 0.347, "range_salinity": 0.333, "facultative_respiration": 0.049, "anaerobic_respiration": 0.019, "aerobic_respiration": 0.931, "mesophilic_range_tmp": 0.789, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.21, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Flavobacterium", "aurantiibacter" ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }