{ "type": "genome", "identifier": "GCF_002257585.1", "organism": "Mucilaginibacter xinganensis", "title": "Mucilaginibacter xinganensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Henan University of Science and Technology", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002257585.1", "bioproject": "PRJNA224116", "biosample": "SAMN07485681", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1234841", "species_taxid": "1234841", "organism_name": "Mucilaginibacter xinganensis", "infraspecific_name": "strain=BJC16-A31", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/08/16", "asm_name": "ASM225758v1", "asm_submitter": "Henan University of Science and Technology", "gbrs_paired_asm": "GCA_002257585.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/257/585/GCF_002257585.1_ASM225758v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5301339", "genome_size_ungapped": "5301339", "gc_percent": "42.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002257585.1-RS_2024_10_22", "annotation_date": "2024-10-22", "total_gene_count": "4622", "protein_coding_gene_count": "4553", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-08-16", "dateModified": "2017-08-16", "datePublished": "2017-08-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Mucilaginibacter xinganensis" ], "sample_taxid": [ "1234841" ], "sample_host_organism": [], 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"total_fragments": 1767, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter phyllosphaerae", "strain": "strain=PP-F2FG21", "accession": "GCA_004378255.1", "taxid": 1812349, "species_taxid": 1812349, "relation_to_type": "type", "validated": true, "ani": 77.4648, "matched_fragments": 319, "total_fragments": 1767, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter lappiensis", "strain": "strain=ATCC BAA-1855", "accession": "GCA_900155965.1", "taxid": 354630, "species_taxid": 354630, "relation_to_type": "type", "validated": true, "ani": 77.4582, "matched_fragments": 376, "total_fragments": 1767, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter inviolabilis", "strain": "strain=HC2", "accession": "GCA_011089895.1", "taxid": 2714892, "species_taxid": 2714892, "relation_to_type": "type", "validated": true, "ani": 77.4537, "matched_fragments": 393, "total_fragments": 1767, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter gilvus", "strain": "strain=F01003", "accession": "GCA_004054195.1", "taxid": 2305909, "species_taxid": 2305909, "relation_to_type": "type", "validated": true, "ani": 77.4214, "matched_fragments": 302, "total_fragments": 1767, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter galii", "strain": "strain=CCM 8711", "accession": "GCA_014635825.1", "taxid": 2005073, "species_taxid": 2005073, "relation_to_type": "type", "validated": true, "ani": 77.4076, "matched_fragments": 167, "total_fragments": 1767, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter conchicola", "strain": "strain=MYSH2", "accession": "GCA_003432115.1", "taxid": 2303333, "species_taxid": 2303333, "relation_to_type": "type", "validated": true, "ani": 77.4038, "matched_fragments": 256, "total_fragments": 1767, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter celer", "strain": "strain=HYN0043", "accession": "GCA_003576455.2", "taxid": 2305508, "species_taxid": 2305508, "relation_to_type": "type", "validated": true, "ani": 77.3863, "matched_fragments": 389, "total_fragments": 1767, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter agri", "strain": "strain=R11", "accession": "GCA_009928685.1", "taxid": 2695265, "species_taxid": 2695265, "relation_to_type": "type", "validated": true, "ani": 77.2818, "matched_fragments": 202, "total_fragments": 1767, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mucilaginibacter terrenus", "strain": "strain=ZH6", "accession": "GCA_003432065.1", "taxid": 2482727, "species_taxid": 2482727, "relation_to_type": "type", "validated": true, "ani": 77.2498, "matched_fragments": 210, "total_fragments": 1767, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, 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null, "cell_diameter": -0.382, "cell_length": 0.217, "doubling_h": null, "growth_tmp": 25.111, "optimum_tmp": 26.0, "optimum_ph": 6.449, "genome_size": 6405217.25, "gc_content": 43.045, "coding_genes": 5407.0, "rRNA16S_genes": 2.0, "tRNA_genes": 47.0, "gram_stain": 0.0, "sporulation": 0.0, "motility": 0.0, "range_salinity": null, "facultative_respiration": 0.269, "anaerobic_respiration": 0.0, "aerobic_respiration": 0.73, "mesophilic_range_tmp": 1.0, "thermophilic_range_tmp": 0.0, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Mucilaginibacter", "xinganensis" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }