{
    "type": "genome",
    "identifier": "GCF_002270485.1",
    "organism": "Anaerostipes hominis (ex Lee et al. 2021)",
    "title": "Anaerostipes hominis (ex Lee et al. 2021)",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Kyung Hee University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_002270485.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN07460465",
        "wgs_master": "NQOG00000000.1",
        "refseq_category": "na",
        "taxid": "2025494",
        "species_taxid": "2025494",
        "organism_name": "Anaerostipes hominis (ex Lee et al. 2021)",
        "infraspecific_name": "strain=BG01",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/08/25",
        "asm_name": "ASM227048v1",
        "asm_submitter": "Kyung Hee University",
        "gbrs_paired_asm": "GCA_002270485.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/270/485/GCF_002270485.1_ASM227048v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3326797",
        "genome_size_ungapped": "3326797",
        "gc_percent": "43.500000",
        "replicon_count": "0",
        "scaffold_count": "86",
        "contig_count": "86",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)",
        "annotation_date": "2024-02-28",
        "total_gene_count": "3500",
        "protein_coding_gene_count": "3320",
        "non_coding_gene_count": "66",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-08-25",
    "dateModified": "2017-08-25",
    "datePublished": "2017-08-25",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Anaerostipes hominis (ex Lee et al. 2021)"
        ],
        "sample_taxid": [
            "2025494"
        ],
        "sample_host_organism": [
            "Homo sapiens"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "South Korea"
        ],
        "sample_host_location_id": [],
        "data_size": "0.945 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
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        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3326797",
        "Number of Sequences": "86",
        "Longest Sequences (bp)": "479931",
        "N50 (bp)": "152729",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "43.5",
        "Number of CDSs": "3403",
        "Average Protein Length": "285.6",
        "Coding Ratio (%)": "87.6",
        "Number of rRNAs": "1",
        "Number of tRNAs": "54",
        "Number of CRISPRs": "7"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Anaerostipes hominis",
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                "accession": "GCA_002270485.1",
                "taxid": 2025494,
                "species_taxid": 2025494,
                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
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                "ani_threshold": 95,
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            },
            {
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                "accession": "GCA_014467075.1",
                "taxid": 105841,
                "species_taxid": 105841,
                "relation_to_type": "type",
                "validated": true,
                "ani": 92.0786,
                "matched_fragments": 792,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerostipes caccae",
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                "matched_fragments": 795,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerostipes caccae",
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                "species_taxid": 105841,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 803,
                "total_fragments": 1074,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerostipes caccae",
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                "species_taxid": 105841,
                "relation_to_type": "type",
                "validated": true,
                "ani": 91.9673,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Anaerostipes rhamnosivorans",
                "strain": "strain=1y2",
                "accession": "GCA_005280655.1",
                "taxid": 1229621,
                "species_taxid": 1229621,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.1462,
                "matched_fragments": 674,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
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        "gtdb_result": [
            {
                "accession": "GCA_000508985.1",
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                "ani": 99.9136,
                "matched_fragments": 1043,
                "total_fragments": 1074,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes",
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                "num_clustered_genomes": 11,
                "status": "conclusive"
            },
            {
                "accession": "GCF_014467075.1",
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                "ani": 92.0593,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "98.81",
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                "num_clustered_genomes": 11,
                "status": "-"
            },
            {
                "accession": "GCF_005280655.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes",
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                "num_clustered_genomes": 3,
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            },
            {
                "accession": "GCA_018381315.1",
                "gtdb_species": "s__Anaerostipes sp018381315",
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                "matched_fragments": 646,
                "total_fragments": 1074,
                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
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                "status": "-"
            },
            {
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                "gtdb_species": "s__Anaerostipes sp900066705",
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                "matched_fragments": 114,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes",
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                "mean_intra_species_ani": "99.16",
                "min_intra_species_ani": "98.31",
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                "num_clustered_genomes": 3,
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            },
            {
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                "gtdb_species": "s__Anaerostipes butyraticus",
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                "matched_fragments": 144,
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                "gtdb_taxonomy": "d__Bacteria;p__Firmicutes_A;c__Clostridia;o__Lachnospirales;f__Lachnospiraceae;g__Anaerostipes",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "99.19",
                "min_intra_species_ani": "99.02",
                "mean_intra_species_af": "0.93",
                "min_intra_species_af": "0.93",
                "num_clustered_genomes": 4,
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            }
        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": 0.181,
        "cell_length": 0.5,
        "doubling_h": null,
        "growth_tmp": 37.75,
        "optimum_tmp": 39.5,
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        "gc_content": 40.613,
        "coding_genes": 2835.5,
        "rRNA16S_genes": 9.0,
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        "gram_stain": 1.0,
        "sporulation": 0.333,
        "motility": 0.0,
        "range_salinity": null,
        "facultative_respiration": 0.0,
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        "mesophilic_range_tmp": 1.0,
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        "psychrophilic_range_tmp": 0.0,
        "bacillus_cell_shape": 1.0,
        "coccus_cell_shape": 0.0,
        "filament_cell_shape": 0.0,
        "coccobacillus_cell_shape": 0.0,
        "vibrio_cell_shape": 0.0,
        "spiral_cell_shape": 0.0
    },
    "_genome_taxon": [
        "Anaerostipes",
        "hominis",
        "(ex",
        "Lee",
        "et",
        "al.",
        "2021)"
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}