{ "type": "genome", "identifier": "GCF_002285495.1", "organism": "Clostridium isatidis", "title": "Clostridium isatidis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of Nottingham", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002285495.1", "bioproject": "PRJNA224116", "biosample": "SAMN05468136", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "182773", "species_taxid": "182773", "organism_name": "Clostridium isatidis", "infraspecific_name": "strain=DSM 15098", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/09/05", "asm_name": "ASM228549v1", "asm_submitter": "University of Nottingham", "gbrs_paired_asm": "GCA_002285495.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/285/495/GCF_002285495.1_ASM228549v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2869927", "genome_size_ungapped": "2869927", "gc_percent": "29.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-03-05", "total_gene_count": "2785", "protein_coding_gene_count": "2642", "non_coding_gene_count": "114", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-09-05", "dateModified": "2017-09-05", "datePublished": "2017-09-05", "_annotation": { "sample_count": 1, "sample_organism": [ "Clostridium isatidis" ], "sample_taxid": [ "182773" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ 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"ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Clostridium nigeriense", "strain": "strain=Marseille-P2414", "accession": "GCA_900086595.1", "taxid": 1805470, "species_taxid": 1805470, "relation_to_type": "type", "validated": true, "ani": 79.2257, "matched_fragments": 391, "total_fragments": 956, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium chauvoei", "strain": "strain=DSM 7528", "accession": "GCA_002327185.1", "taxid": 46867, "species_taxid": 46867, "relation_to_type": "type", "validated": true, "ani": 78.8445, "matched_fragments": 265, "total_fragments": 956, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clostridium gallinarum", "strain": "strain=Sa3CUN1", "accession": "GCA_014836325.1", "taxid": 2762246, "species_taxid": 2762246, "relation_to_type": "type", "validated": true, "ani": 78.8405, "matched_fragments": 352, "total_fragments": 956, "ani_threshold": 95, "status": "below_threshold" }, { 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