{ "tc_result": [ { "organism_name": "Pseudoalteromonas tunicata", "strain": "strain=D2", "accession": "GCA_002310815.1", "taxid": 314281, "species_taxid": 314281, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1652, "total_fragments": 1652, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudoalteromonas tunicata", "strain": "strain=D2", "accession": "GCA_003568825.1", "taxid": 314281, "species_taxid": 314281, "relation_to_type": "type", "validated": true, "ani": 99.988, "matched_fragments": 1648, "total_fragments": 1652, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudoalteromonas tunicata", "strain": "strain=D2", "accession": "GCA_000153245.1", "taxid": 314281, "species_taxid": 314281, "relation_to_type": "type", "validated": true, "ani": 99.9797, "matched_fragments": 1636, "total_fragments": 1652, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudoalteromonas ulvae", "strain": "strain=UL12", "accession": "GCA_014925405.1", "taxid": 107327, "species_taxid": 107327, "relation_to_type": "type", "validated": true, "ani": 79.8671, "matched_fragments": 624, "total_fragments": 1652, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Providencia manganoxydans", "strain": "strain=LLDRA6", "accession": "GCA_016618195.1", "taxid": 2923283, "species_taxid": 2923283, "relation_to_type": "type", "validated": true, "ani": 79.4521, "matched_fragments": 52, "total_fragments": 1652, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas arctica", "strain": "strain=A 37-1-2", "accession": "GCA_000238395.4", "taxid": 394751, "species_taxid": 394751, "relation_to_type": "type", "validated": true, "ani": 78.7271, "matched_fragments": 263, "total_fragments": 1652, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas undina", "strain": "strain=DSM 6065", "accession": "GCA_000238275.4", "taxid": 43660, "species_taxid": 43660, "relation_to_type": "type", "validated": true, "ani": 78.4912, "matched_fragments": 249, "total_fragments": 1652, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas translucida", "strain": "strain=KMM 520", "accession": "GCA_001465295.1", "taxid": 166935, "species_taxid": 166935, "relation_to_type": "type", "validated": true, "ani": 78.4664, "matched_fragments": 256, "total_fragments": 1652, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas fuliginea", "strain": "strain=KMM 216", "accession": "GCA_000690055.1", "taxid": 1872678, "species_taxid": 1872678, "relation_to_type": "type", "validated": true, "ani": 78.233, "matched_fragments": 240, "total_fragments": 1652, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas espejiana", "strain": "strain=NBRC 102222", "accession": "GCA_007989585.1", "taxid": 28107, "species_taxid": 28107, "relation_to_type": "type", "validated": true, "ani": 77.9239, "matched_fragments": 223, "total_fragments": 1652, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudoalteromonas gelatinilytica", "strain": "strain=NH153", "accession": "GCA_001641615.1", "taxid": 1703256, "species_taxid": 1703256, "relation_to_type": "type", "validated": true, "ani": 77.8079, "matched_fragments": 266, "total_fragments": 1652, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Shewanella olleyana", "strain": "strain=LMG 21437", "accession": "GCA_023283825.1", "taxid": 135626, "species_taxid": 135626, "relation_to_type": "type", "validated": true, "ani": 76.3238, "matched_fragments": 80, "total_fragments": 1652, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002310815.1", "gtdb_species": "s__Pseudoalteromonas tunicata", "ani": 100.0, "matched_fragments": 1651, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 3, "status": "conclusive" }, { "accession": "GCF_014925405.1", "gtdb_species": "s__Pseudoalteromonas ulvae", "ani": 79.8724, "matched_fragments": 623, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.81", "min_intra_species_ani": "98.81", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900239935.1", "gtdb_species": "s__Pseudoalteromonas carrageenovora", "ani": 78.7872, "matched_fragments": 256, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.00", "min_intra_species_ani": "96.44", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.91", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_000238395.3", "gtdb_species": "s__Pseudoalteromonas arctica", "ani": 78.7715, "matched_fragments": 261, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.91", "min_intra_species_ani": "96.03", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.80", "num_clustered_genomes": 33, "status": "-" }, { "accession": "GCF_002221525.1", "gtdb_species": "s__Pseudoalteromonas espejiana", "ani": 78.668, "matched_fragments": 243, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004792295.1", "gtdb_species": "s__Pseudoalteromonas lipolytica_C", "ani": 78.6321, "matched_fragments": 251, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.42", "min_intra_species_ani": "98.24", "mean_intra_species_af": "0.87", "min_intra_species_af": "0.68", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_001465295.1", "gtdb_species": "s__Pseudoalteromonas translucida", "ani": 78.5201, "matched_fragments": 251, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 96.0242, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004328665.1", "gtdb_species": "s__Pseudoalteromonas sp001974855", "ani": 78.4959, "matched_fragments": 244, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.16", "min_intra_species_ani": "95.35", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.83", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_012927645.1", "gtdb_species": "s__Pseudoalteromonas arctica_A", "ani": 78.2641, "matched_fragments": 267, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001469215.1", "gtdb_species": "s__Pseudoalteromonas sp001469215", "ani": 78.1572, "matched_fragments": 255, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000238335.3", "gtdb_species": "s__Pseudoalteromonas marina", "ani": 78.1141, "matched_fragments": 229, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.76", "min_intra_species_ani": "97.57", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.88", "num_clustered_genomes": 12, "status": "-" }, { "accession": "GCF_000788395.1", "gtdb_species": "s__Pseudoalteromonas piratica", "ani": 77.9495, "matched_fragments": 233, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011378855.1", "gtdb_species": "s__Pseudoalteromonas sp011378855", "ani": 77.9075, "matched_fragments": 253, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.10", "min_intra_species_ani": "97.06", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000238355.1", "gtdb_species": "s__Pseudoalteromonas haloplanktis", "ani": 77.8975, "matched_fragments": 261, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.55", "min_intra_species_ani": "99.12", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.93", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_002165575.1", "gtdb_species": "s__Pseudoalteromonas sp002165575", "ani": 77.8813, "matched_fragments": 259, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001641615.1", "gtdb_species": "s__Pseudoalteromonas gelatinilytica", "ani": 77.8236, "matched_fragments": 264, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.27", "min_intra_species_ani": "97.45", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.88", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_000498095.1", "gtdb_species": "s__Pseudoalteromonas sp000498095", "ani": 77.7837, "matched_fragments": 249, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.86", "min_intra_species_ani": "97.76", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.87", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_002723455.1", "gtdb_species": "s__Pseudoalteromonas sp002723455", "ani": 77.7266, "matched_fragments": 237, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.50", "min_intra_species_ani": "98.50", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_018100905.1", "gtdb_species": "s__Pseudoalteromonas sp018100905", "ani": 77.6754, "matched_fragments": 217, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900116435.1", "gtdb_species": "s__Pseudoalteromonas lipolytica", "ani": 77.669, "matched_fragments": 232, "total_fragments": 1652, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Enterobacterales;f__Alteromonadaceae;g__Pseudoalteromonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.07", "min_intra_species_ani": "98.83", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.86", "num_clustered_genomes": 12, "status": "-" } ] }