# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_9	LOCUS_00090	sequence1:12423..12983(-)	frameshift		12512,12347,12227	WP_011728215.1	MerR family transcriptional regulator	83.3	60.3	80.6
MGA_23	LOCUS_00230	sequence1:27169..27816(+)	partial			WP_048053779.1	type-4 uracil-DNA glycosylase	54.9	59.8	34.7
MGA_26	LOCUS_00260	sequence1:29770..30294(-)	frameshift		30329	WP_005110025.1	glycine betaine ABC transporter substrate-binding protein	100.0	55.6	74.7
MGA_27	LOCUS_00270	sequence1:30315..30764(-)	frameshift		30323	WP_011728692.1	glycine betaine ABC transporter substrate-binding protein	79.2	37.2	70.3
MGA_28	LOCUS_00280	sequence1:30770..31051(-)	frameshift		31116	WP_005110024.1	ABC transporter permease	100.0	35.6	83.9
MGA_29	LOCUS_00290	sequence1:30958..31578(-)	frameshift		31116	WP_070943583.1	ABC transporter permease	65.0	51.0	67.2
MGA_38	LOCUS_00380	sequence1:38035..38256(-)	partial			WP_003400388.1	transcriptional regulator WhiB5	100.0	53.2	74.3
MGA_51	LOCUS_00510	sequence1:46714..47751(-)	frameshift,internal_stop_codon	47761..47763(-)	48022	WP_003400431.1	MFS transporter	97.1	76.0	75.8
MGA_52	LOCUS_00520	sequence1:47761..48021(-)	frameshift,internal_stop_codon	47761..47763(-)	48022	WP_003400431.1	MFS transporter	100.0	19.5	84.9
MGA_54	LOCUS_00540	sequence1:48758..49288(-)	internal_stop_codon	49307..49309(-)		WP_003100363.1	bile acid:sodium symporter	89.8	47.4	42.4
MGA_55	LOCUS_00550	sequence1:49307..49738(-)	internal_stop_codon	49307..49309(-)		WP_005095694.1	bile acid:sodium symporter	94.4	40.2	46.7
MGA_60	LOCUS_00600	sequence1:55140..55643(-)	frameshift		55720	WP_003400476.1	MarR family transcriptional regulator	96.4	77.4	83.9
MGA_65	LOCUS_00650	sequence1:60001..60693(-)	frameshift		60719	WP_003400489.1	alpha/beta hydrolase	100.0	77.5	80.5
MGA_66	LOCUS_00660	sequence1:60690..60911(-)	frameshift		60719	WP_003400489.1	alpha/beta hydrolase	82.2	18.8	75.0
MGA_69	LOCUS_00690	sequence1:62827..63819(-)	partial			WP_010950330.1	DUF1707 domain-containing protein	59.7	68.2	77.2
MGA_85	LOCUS_00850	sequence1:78412..79269(-)	frameshift		79454	WP_003403977.1	MFS transporter	93.7	49.1	51.5
MGA_86	LOCUS_00860	sequence1:79452..80006(-)	frameshift		79463	WP_003403977.1	MFS transporter	97.8	33.5	65.7
MGA_90	LOCUS_00900	sequence1:84772..85716(+)	internal_stop_codon	85714..85716(+)		WP_067456433.1	type I polyketide synthase	100.0	8.2	52.8
MGA_91	LOCUS_00910	sequence1:85753..87930(+)	internal_stop_codon	85714..85716(+)		WP_206334115.1	type I polyketide synthase	80.7	11.7	39.8
MGA_92	LOCUS_00920	sequence1:87927..90452(+)	frameshift		90344,90347	WP_012296729.1	non-ribosomal peptide synthetase	94.9	22.6	43.7
MGA_93	LOCUS_00930	sequence1:90449..90913(+)	frameshift		90347,90341	WP_083452801.1	non-ribosomal peptide synthetase	94.8	4.3	74.7
MGA_94	LOCUS_00940	sequence1:90910..91956(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_95	LOCUS_00950	sequence1:92365..93261(+)	internal_stop_codon	93259..93261(+)		WP_009968094.1	non-ribosomal peptide synthetase DhbF	99.7	12.7	31.6
MGA_97	LOCUS_00970	sequence1:94057..95103(+)	frameshift		95016	WP_003414884.1	p-hydroxybenzoic acid--AMP ligase FadD22	92.2	45.5	69.2
MGA_98	LOCUS_00980	sequence1:95031..95912(+)	frameshift		95019,95901	WP_003414884.1	p-hydroxybenzoic acid--AMP ligase FadD22	99.0	41.1	59.5
MGA_100	LOCUS_01000	sequence1:96676..99417(+)	frameshift		99411	WP_003900387.1	type I polyketide synthase	100.0	42.5	62.4
MGA_101	LOCUS_01010	sequence1:99419..102412(+)	frameshift,internal_stop_codon	99415..99417(+)	99420	WP_003917711.1	type I polyketide synthase	90.9	55.9	59.3
MGA_103	LOCUS_01030	sequence1:103592..104971(+)	partial			WP_012257994.1	AMP-binding protein	56.6	54.2	27.3
MGA_104	LOCUS_01040	sequence1:105076..105339(-)	partial			WP_003892281.1	DUF1707 domain-containing protein	79.3	49.3	36.0
MGA_108	LOCUS_01080	sequence1:108894..109802(+)	frameshift		108796	WP_189284839.1	LOG family protein	85.8	63.2	37.5
MGA_109	LOCUS_01090	sequence1:110228..111400(+)	frameshift		110153	WP_003901784.1	FAD-binding oxidoreductase	99.7	81.2	81.0
MGA_110	LOCUS_01100	sequence1:111436..112410(-)	partial			WP_010886125.1	PE domain-containing protein	53.7	17.2	32.8
MGA_111	LOCUS_01110	sequence1:112465..113511(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_116	LOCUS_01160	sequence1:118721..120109(+)	partial			WP_004191694.1	ATP-dependent zinc metalloprotease FtsH	39.0	31.1	35.0
MGA_131	LOCUS_01310	sequence1:137759..138292(+)	frameshift		137753	WP_005062378.1	CoA pyrophosphatase	100.0	74.4	82.5
MGA_134	LOCUS_01340	sequence1:139993..140538(-)	internal_stop_codon	140647..140649(-),140542..140544(-)		WP_003896175.1	amidohydrolase family protein	82.9	37.9	37.1
MGA_135	LOCUS_01350	sequence1:140647..141186(-)	internal_stop_codon	140647..140649(-),140542..140544(-)		WP_011728237.1	amidohydrolase family protein	97.8	42.5	46.3
MGA_137	LOCUS_01370	sequence1:143583..144440(-)	partial			WP_003411868.1	amidohydrolase family protein	76.1	69.7	29.0
MGA_180	LOCUS_01800	sequence1:188615..191008(+)	partial			WP_010950597.1	PE family protein	16.1	19.4	50.0
MGA_183	LOCUS_01830	sequence1:193731..195404(+)	partial			WP_003399879.1	type VII secretion system ESX-1 target PPE68	53.3	80.4	52.6
MGA_191	LOCUS_01910	sequence1:203271..203549(-)	internal_stop_codon	203562..203564(-)		WP_011729335.1	hypothetical protein	100.0	27.2	40.4
MGA_192	LOCUS_01920	sequence1:203562..204191(-)	frameshift,internal_stop_codon	203561..203563(-)	204151	WP_011729335.1	hypothetical protein	83.7	46.8	51.4
MGA_197	LOCUS_01970	sequence1:207652..208275(-)	internal_stop_codon	208312..208314(-)		WP_011729339.1	hypothetical protein	99.0	35.8	62.4
MGA_198	LOCUS_01980	sequence1:208312..209469(-)	internal_stop_codon	208312..208314(-)		WP_011729339.1	hypothetical protein	92.7	61.6	57.1
MGA_199	LOCUS_01990	sequence1:209469..209807(-)	partial			WP_003895248.1	lipoprotein LpqH	97.3	69.0	66.1
MGA_201	LOCUS_02010	sequence1:210833..211648(-)	partial			WP_003420421.1	lipid uptake coordinator LucA	59.4	63.4	83.2
MGA_206	LOCUS_02060	sequence1:216385..216627(-)	partial			WP_011729752.1	lipopolysaccharide assembly protein LapA domain-containing protein	61.2	64.5	49.0
MGA_211	LOCUS_02110	sequence1:220709..221152(+)	partial			WP_003420408.1	YbaB/EbfC family nucleoid-associated protein	63.3	69.9	76.3
MGA_219	LOCUS_02190	sequence1:228366..228929(+)	partial			WP_003401153.1	hypothetical protein	86.1	26.2	66.5
MGA_220	LOCUS_02200	sequence1:229035..229919(+)	partial			WP_003401153.1	hypothetical protein	97.3	46.5	79.4
MGA_221	LOCUS_02210	sequence1:229926..232586(-)	frameshift		232572	WP_003911097.1	ABC transporter ATP-binding protein	97.1	74.6	70.9
MGA_227	LOCUS_02270	sequence1:238742..239788(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_228	LOCUS_02280	sequence1:240064..243441(-)	partial			WP_009938544.1	PE family protein	10.7	15.4	56.7
MGA_231	LOCUS_02310	sequence1:244195..244542(+)	partial			WP_003419814.1	hypothetical protein	38.3	34.1	54.5
MGA_240	LOCUS_02400	sequence1:253131..253838(-)	frameshift		253837	WP_003899645.1	hypothetical protein	97.9	45.2	77.8
MGA_243	LOCUS_02430	sequence1:256280..258766(-)	partial			WP_010886084.1	PE family protein	16.5	19.0	43.6
MGA_244	LOCUS_02440	sequence1:258925..259629(-)	partial			WP_050039320.1	PadR family transcriptional regulator	61.5	76.6	75.0
MGA_251	LOCUS_02510	sequence1:265876..267075(-)	frameshift		267151	WP_003419768.1	membrane protein	83.2	74.7	65.3
MGA_255	LOCUS_02550	sequence1:269533..271122(-)	internal_stop_codon	271171..271173(-)		WP_013225067.1	formate dehydrogenase	99.2	47.8	77.1
MGA_259	LOCUS_02580	sequence1:273612..275396(+)	partial			WP_135359439.1	MFS transporter	72.7	78.3	38.7
MGA_265	LOCUS_02640	sequence1:281439..283667(-)	partial			WP_013227688.1	SpoIIE family protein phosphatase	93.3	51.8	38.2
MGA_273	LOCUS_02720	sequence1:287637..287999(+)	partial			WP_005088224.1	PAS and ANTAR domain-containing protein	77.5	41.2	47.3
MGA_275	LOCUS_02740	sequence1:288490..288732(+)	internal_stop_codon	288730..288732(+)		WP_005057245.1	DUF4193 domain-containing protein	96.2	75.0	51.3
MGA_321	LOCUS_03200	sequence1:334709..335335(+)	partial			WP_005080717.1	alpha/beta hydrolase	86.5	62.7	29.4
MGA_322	LOCUS_03210	sequence1:335900..337474(-)	partial			WP_010886177.1	PE family protein	25.4	22.8	54.9
MGA_336	LOCUS_03350	sequence1:349952..350998(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_337	LOCUS_03360	sequence1:351145..351306(+)	frameshift		351131	WP_003899605.1	PE family protein	100.0	53.5	69.8
MGA_339	LOCUS_03380	sequence1:353344..353556(-)	frameshift,internal_stop_codon	353343..353345(-)	353639	WP_003899601.1	LLM class flavin-dependent oxidoreductase	98.6	17.5	92.8
MGA_340	LOCUS_03390	sequence1:353625..353795(-)	frameshift,internal_stop_codon	353343..353345(-)	353639	WP_003899601.1	LLM class flavin-dependent oxidoreductase	85.7	12.2	95.8
MGA_356	LOCUS_03550	sequence1:369952..370359(+)	frameshift		370206	WP_010886067.1	PE family protein	62.2	17.2	67.9
MGA_357	LOCUS_03560	sequence1:370262..371320(+)	frameshift		370209	WP_010886167.1	PE family protein	13.4	8.0	61.7
MGA_358	LOCUS_03570	sequence1:371497..371706(+)	partial			WP_005065012.1	CbtB-domain containing protein	63.8	64.7	75.0
MGA_364	LOCUS_03630	sequence1:378216..378407(-)	internal_stop_codon	378216..378218(-)		WP_003419501.1	mycobilin-forming heme oxygenase MhuD	100.0	60.0	95.2
MGA_397	LOCUS_03960	sequence1:408066..408578(-)	frameshift		408618	WP_005112261.1	cytochrome c biogenesis CcdA family protein	85.9	51.6	60.3
MGA_399	LOCUS_03980	sequence1:408951..409496(-)	partial			WP_003408271.1	protein disulfide oxidoreductase	74.6	74.2	56.3
MGA_420	LOCUS_04190	sequence1:431148..432662(+)	partial			WP_010950907.1	PE family protein	32.9	13.7	33.7
MGA_438	LOCUS_04370	sequence1:449212..449811(-)	frameshift		449944	WP_028175426.1	circularly permuted type 2 ATP-grasp protein	92.0	37.9	50.5
MGA_447	LOCUS_04460	sequence1:458193..459053(-)	internal_stop_codon	458193..458195(-)		WP_003899118.1	PecA family PE domain-processing aspartic protease	39.9	21.1	50.0
MGA_454	LOCUS_04530	sequence1:465406..465852(+)	frameshift		465392	WP_003900084.1	LLM class F420-dependent oxidoreductase	98.6	42.1	85.6
MGA_463	LOCUS_04620	sequence1:474363..475928(-)	frameshift,internal_stop_codon	475197..475199(-)	474880,474626,474886,475463,474568,474941,474892,474797,474251,474736,475954,475411,474899,475867,474365	WP_010950904.1	PE family protein	43.8	17.3	25.1
MGA_464	LOCUS_04630	sequence1:476123..478390(-)	frameshift		476752,476788,476424,476473,476746	WP_010886155.1	PE family protein	14.3	17.6	47.2
MGA_485	LOCUS_04840	sequence1:500605..501651(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_487	LOCUS_04860	sequence1:503207..503680(+)	frameshift		503187,503180,503590	WP_011405168.1	ABC transporter permease	75.2	41.8	35.6
MGA_488	LOCUS_04870	sequence1:503659..503910(+)	frameshift		503593,503830	WP_003415160.1	ABC transporter permease	74.7	28.3	46.8
MGA_497	LOCUS_04960	sequence1:512225..512608(+)	partial			WP_003418931.1	LppP/LprE family lipoprotein	89.8	51.8	74.6
MGA_498	LOCUS_04970	sequence1:512842..513420(+)	partial			WP_003418925.1	DUF2510 domain-containing protein	99.5	73.5	56.0
MGA_500	LOCUS_04990	sequence1:515195..515638(+)	frameshift		515593	WP_003418922.1	GAP family protein	90.5	58.5	64.9
MGA_501	LOCUS_05000	sequence1:515584..515844(+)	frameshift		515593	WP_003418922.1	GAP family protein	93.0	34.9	60.0
MGA_502	LOCUS_05010	sequence1:516039..516260(+)	internal_stop_codon	516258..516260(+)		WP_003418777.1	alpha/beta hydrolase	100.0	28.0	83.6
MGA_503	LOCUS_05020	sequence1:516276..516824(+)	internal_stop_codon	516258..516260(+)		WP_003418777.1	alpha/beta hydrolase	98.4	68.6	78.8
MGA_512	LOCUS_05110	sequence1:523404..525137(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	56.2	55.5	66.2
MGA_516	LOCUS_05150	sequence1:529994..530200(+)	partial			WP_011727573.1	solute carrier family 23 protein	91.2	9.8	82.3
MGA_517	LOCUS_05160	sequence1:530480..531526(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_528	LOCUS_05270	sequence1:542555..543946(-)	partial			WP_003900090.1	PPE family protein	65.0	59.3	53.2
MGA_534	LOCUS_05330	sequence1:548457..548606(-)	partial			WP_003403890.1	ferredoxin	85.7	61.8	85.7
MGA_537	LOCUS_05360	sequence1:550797..551414(-)	internal_stop_codon	551448..551450(-)		WP_005110014.1	cytochrome P450	99.5	49.9	74.5
MGA_538	LOCUS_05370	sequence1:551448..552020(-)	internal_stop_codon	551448..551450(-)		WP_011730851.1	cytochrome P450	95.3	44.2	75.1
MGA_539	LOCUS_05380	sequence1:552017..552436(-)	frameshift		552494	WP_003403915.1	TetR/AcrR family transcriptional regulator	89.9	58.7	75.2
MGA_540	LOCUS_05390	sequence1:552895..554025(+)	frameshift		553992	WP_003403919.1	aldehyde dehydrogenase	98.4	75.7	81.9
MGA_541	LOCUS_05400	sequence1:553971..554360(+)	frameshift		553992	WP_003403919.1	aldehyde dehydrogenase	97.7	25.8	89.7
MGA_546	LOCUS_05450	sequence1:557820..559370(-)	partial			WP_011729255.1	serine/threonine-protein kinase	61.0	61.7	62.5
MGA_549	LOCUS_05480	sequence1:562787..563833(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_557	LOCUS_05560	sequence1:570931..571251(+)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	93.4	19.5	49.0
MGA_559	LOCUS_05580	sequence1:572450..572815(+)	partial			WP_003899661.1	PPE domain-containing protein	92.6	38.4	39.5
MGA_568	LOCUS_05670	sequence1:581815..582480(-)	internal_stop_codon	582601..582603(-)		WP_003403977.1	MFS transporter	97.7	39.4	64.8
MGA_569	LOCUS_05680	sequence1:582601..583434(-)	internal_stop_codon	582601..582603(-)		WP_003403977.1	MFS transporter	99.6	51.1	64.9
MGA_570	LOCUS_05690	sequence1:583808..584308(+)	frameshift		583728	WP_003898589.1	DUF2334 domain-containing protein	100.0	72.8	78.9
MGA_575	LOCUS_05740	sequence1:587015..587734(+)	frameshift,internal_stop_codon	586853..586855(+)	586812	WP_010886087.1	hypothetical protein	99.6	74.6	72.3
MGA_577	LOCUS_05760	sequence1:588301..589347(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_578	LOCUS_05770	sequence1:589745..590203(-)	frameshift		589822	WP_005095821.1	PPE family protein	88.2	27.2	52.6
MGA_582	LOCUS_05810	sequence1:591679..591918(-)	frameshift,internal_stop_codon	591679..591681(-)	591961	WP_003403998.1	hypothetical protein	96.2	37.7	65.8
MGA_589	LOCUS_05880	sequence1:597732..597959(+)	frameshift		597911	WP_003898592.1	VOC family protein	81.3	53.0	78.7
MGA_590	LOCUS_05890	sequence1:597922..598080(+)	frameshift		597911	WP_003898592.1	VOC family protein	100.0	45.2	71.2
MGA_601	LOCUS_06000	sequence1:610429..610608(-)	partial			WP_003404135.1	DUF3073 domain-containing protein	66.1	65.0	92.3
MGA_604	LOCUS_06030	sequence1:612492..613994(-)	frameshift		614010	WP_009935691.1	copper-translocating P-type ATPase	99.8	64.8	84.6
MGA_605	LOCUS_06040	sequence1:613963..614895(-)	frameshift		614013	WP_009935691.1	copper-translocating P-type ATPase	87.7	34.0	55.7
MGA_612	LOCUS_06110	sequence1:619422..620006(-)	frameshift		620044	WP_003898596.1	FABP family protein	99.5	85.0	85.0
MGA_617	LOCUS_06160	sequence1:623630..624181(+)	partial			WP_003903189.1	response regulator transcription factor	99.5	71.4	87.9
MGA_620	LOCUS_06190	sequence1:626440..627240(+)	frameshift		627033	WP_011730785.1	phosphate ABC transporter permease subunit PstC	74.1	56.1	69.0
MGA_621	LOCUS_06200	sequence1:627173..627472(+)	frameshift		627036	WP_011730785.1	phosphate ABC transporter permease subunit PstC	97.0	27.4	62.5
MGA_625	LOCUS_06240	sequence1:629934..631073(-)	internal_stop_codon	631074..631076(-)		WP_003898600.1	LCP family protein	100.0	55.3	81.0
MGA_626	LOCUS_06250	sequence1:631074..631379(-)	internal_stop_codon	631416..631418(-),631074..631076(-)		WP_003404316.1	LCP family protein	100.0	14.8	87.1
MGA_627	LOCUS_06260	sequence1:631416..631970(-)	internal_stop_codon	631416..631418(-)		WP_003898600.1	LCP family protein	77.7	19.6	44.5
MGA_643	LOCUS_06420	sequence1:648609..650435(-)	partial			WP_010886172.1	PE family protein	27.3	7.2	33.7
MGA_645	LOCUS_06440	sequence1:652040..653254(-)	partial			WP_013225697.1	amidohydrolase family protein	71.8	72.9	31.1
MGA_648	LOCUS_06470	sequence1:654068..655006(-)	partial			WP_013530979.1	SDR family NAD(P)-dependent oxidoreductase	66.7	69.8	38.2
MGA_649	LOCUS_06480	sequence1:655194..655628(+)	frameshift,internal_stop_codon	655627..655629(+)	655170	WP_010918753.1	AAA family ATPase	99.3	69.9	55.2
MGA_650	LOCUS_06490	sequence1:655944..656186(+)	partial			WP_003411082.1	hypothetical protein	67.5	80.6	46.3
MGA_651	LOCUS_06500	sequence1:656230..657138(+)	frameshift		657054	WP_010908259.1	amino acid permease	85.8	51.3	73.4
MGA_652	LOCUS_06510	sequence1:657135..657533(+)	frameshift		657504,657057	WP_005111414.1	amino acid permease	93.9	25.1	67.7
MGA_653	LOCUS_06520	sequence1:657533..657712(+)	frameshift		657503	WP_003899182.1	amino acid permease	89.8	10.8	58.5
MGA_664	LOCUS_06630	sequence1:666576..667454(-)	frameshift		666602,666574	WP_013225925.1	polyprenyl synthetase family protein	91.4	72.5	56.3
MGA_669	LOCUS_06680	sequence1:670245..670898(+)	frameshift		670221	WP_003898609.1	M15 family metallopeptidase	90.3	76.6	78.6
MGA_683	LOCUS_06820	sequence1:683602..683832(+)	frameshift		683808	WP_003408807.1	type VII secretion system ESX-5 target PE19	90.8	69.7	65.2
MGA_686	LOCUS_06850	sequence1:686840..687502(+)	frameshift		687436	WP_003898611.1	sensor histidine kinase	81.8	43.1	53.6
MGA_687	LOCUS_06860	sequence1:687520..688233(+)	frameshift		687436	WP_003898611.1	sensor histidine kinase	86.1	48.0	77.5
MGA_696	LOCUS_06950	sequence1:696157..696777(+)	frameshift		696651	WP_011730144.1	FAD-binding protein	72.8	25.6	74.7
MGA_697	LOCUS_06960	sequence1:696752..697912(+)	frameshift		696654	WP_011730144.1	FAD-binding protein	95.6	62.9	75.9
MGA_698	LOCUS_06970	sequence1:697915..698349(+)	frameshift		698319	WP_011730143.1	LLM class flavin-dependent oxidoreductase	93.8	31.0	83.0
MGA_699	LOCUS_06980	sequence1:698346..699215(+)	frameshift		698319	WP_011730143.1	LLM class flavin-dependent oxidoreductase	100.0	66.3	81.0
MGA_701	LOCUS_07000	sequence1:700065..700721(+)	internal_stop_codon	700719..700721(+)		WP_014878166.1	cyclase family protein	99.5	65.4	75.1
MGA_702	LOCUS_07010	sequence1:700737..701054(+)	internal_stop_codon	700719..700721(+)		WP_014878166.1	cyclase family protein	94.3	30.4	80.2
MGA_720	LOCUS_07190	sequence1:719361..719579(-)	frameshift		719601	WP_011730130.1	mycofactocin-coupled SDR family oxidoreductase	100.0	25.6	88.9
MGA_733	LOCUS_07320	sequence1:733089..733520(+)	frameshift		733412	WP_014878160.1	acyl-CoA dehydrogenase family protein	62.9	22.7	83.3
MGA_734	LOCUS_07330	sequence1:733427..734308(+)	frameshift		733412	WP_014878160.1	acyl-CoA dehydrogenase family protein	100.0	76.0	78.1
MGA_737	LOCUS_07360	sequence1:736350..736772(+)	frameshift		736335	WP_011730120.1	hypothetical protein	100.0	83.2	45.4
MGA_750	LOCUS_07490	sequence1:747717..747962(-)	frameshift,internal_stop_codon	747627..747629(-)	747788	WP_011730101.1	Rieske (2Fe-2S) protein	64.2	40.0	94.2
MGA_753	LOCUS_07520	sequence1:750554..751021(-)	partial			WP_003409199.1	DUF4189 domain-containing protein	59.4	63.6	51.1
MGA_763	LOCUS_07620	sequence1:759363..760064(+)	internal_stop_codon	760062..760064(+)		WP_011730094.1	aldehyde dehydrogenase family protein	90.6	43.1	70.6
MGA_764	LOCUS_07630	sequence1:760074..760907(+)	internal_stop_codon	760062..760064(+)		WP_011730094.1	aldehyde dehydrogenase family protein	96.0	54.1	75.9
MGA_769	LOCUS_07680	sequence1:765319..765834(+)	internal_stop_codon	765832..765834(+)		WP_011730088.1	MCE family protein	100.0	50.1	67.3
MGA_770	LOCUS_07690	sequence1:765901..766350(+)	internal_stop_codon	765832..765834(+)		WP_011730088.1	MCE family protein	96.6	42.2	63.9
MGA_774	LOCUS_07730	sequence1:770109..770942(+)	frameshift		770918	WP_011730083.1	MlaD family protein	97.5	46.9	65.2
MGA_775	LOCUS_07740	sequence1:770939..771556(+)	frameshift		770918	WP_011728632.1	MlaD family protein	91.2	37.6	64.4
MGA_777	LOCUS_07760	sequence1:772380..772910(-)	partial			WP_003407152.1	membrane protein	90.9	72.3	54.4
MGA_778	LOCUS_07770	sequence1:772907..773584(-)	partial			WP_003407157.1	membrane protein	81.3	70.1	42.1
MGA_780	LOCUS_07790	sequence1:774179..774469(-)	partial			WP_003417257.1	pilin structural subunit Mtp	80.2	71.8	54.5
MGA_791	LOCUS_07900	sequence1:781837..782808(+)	frameshift		781832	WP_003896175.1	amidohydrolase family protein	99.4	80.8	75.4
MGA_794	LOCUS_07930	sequence1:785498..786091(+)	partial			WP_003407152.1	membrane protein	68.0	60.9	63.4
MGA_815	LOCUS_08140	sequence1:805925..807061(-)	partial			WP_003900223.1	resuscitation-promoting factor protein RpfA	45.8	41.0	70.7
MGA_830	LOCUS_08290	sequence1:819329..819616(+)	partial			WP_003404614.1	DUF2537 domain-containing protein	74.7	75.5	60.6
MGA_838	LOCUS_08370	sequence1:829725..830771(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_839	LOCUS_08380	sequence1:830805..831851(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_840	LOCUS_08390	sequence1:831877..832998(+)	partial			WP_003404651.1	NAD(P)/FAD-dependent oxidoreductase	99.2	74.7	70.3
MGA_842	LOCUS_08410	sequence1:834686..835021(-)	frameshift		835041	WP_003900230.1	NAD(P)/FAD-dependent oxidoreductase	100.0	20.7	80.2
MGA_843	LOCUS_08420	sequence1:835006..836259(-)	frameshift		835041	WP_003900230.1	NAD(P)/FAD-dependent oxidoreductase	96.2	76.1	71.5
MGA_850	LOCUS_08490	sequence1:840777..841475(-)	frameshift		841497	WP_011031577.1	FAD-binding dehydrogenase	94.8	39.5	71.8
MGA_853	LOCUS_08520	sequence1:842547..842738(+)	frameshift		842708	WP_047314267.1	TetR/AcrR family transcriptional regulator	79.4	24.9	84.0
MGA_854	LOCUS_08530	sequence1:842683..843159(+)	frameshift		842708	WP_047314267.1	TetR/AcrR family transcriptional regulator	94.9	73.1	72.7
MGA_855	LOCUS_08540	sequence1:843218..843703(-)	partial			WP_003901259.1	sterol desaturase family protein	91.3	49.0	77.6
MGA_856	LOCUS_08550	sequence1:843911..844957(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_859	LOCUS_08580	sequence1:847815..849056(-)	frameshift,internal_stop_codon	847814..847816(-)	848459,848492	WP_010950932.1	MFS transporter	98.5	38.4	34.2
MGA_865	LOCUS_08640	sequence1:857856..858713(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	81.1	62.5	32.4
MGA_866	LOCUS_08650	sequence1:858764..859810(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_867	LOCUS_08660	sequence1:860406..861671(+)	frameshift		861560,861641,861633	WP_003906336.1	PPE family protein	80.3	15.4	42.5
MGA_868	LOCUS_08670	sequence1:861722..861892(+)	frameshift		861641,861653	WP_122524938.1	PPE domain-containing protein	66.1	1.1	73.0
MGA_869	LOCUS_08680	sequence1:862168..863214(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_870	LOCUS_08690	sequence1:863332..864195(+)	partial			WP_003906336.1	PPE family protein	96.9	11.1	36.3
MGA_874	LOCUS_08730	sequence1:866647..867240(+)	internal_stop_codon	866506..866508(+)		WP_003404735.1	VOC family protein	100.0	76.7	69.5
MGA_881	LOCUS_08800	sequence1:873143..873934(-)	partial			WP_005110186.1	hypothetical protein	76.0	73.7	29.6
MGA_885	LOCUS_08840	sequence1:877695..878987(+)	partial			WP_003401347.1	PPE family protein	47.7	36.3	48.8
MGA_886	LOCUS_08850	sequence1:879255..879758(+)	partial			WP_005086416.1	hypothetical protein	65.9	76.4	43.2
MGA_889	LOCUS_08880	sequence1:880753..883086(+)	frameshift,internal_stop_codon	883225..883227(+),883349..883351(+)	883211,883212,883215,883218,883221,883230,883233,882594,882978,882597,880613,882600,883242,880628,880694,883005	WP_010886165.1	PE family protein	17.6	9.0	52.2
MGA_898	LOCUS_08970	sequence1:890517..890699(-)	frameshift		890884	WP_003404767.1	hypothetical protein	88.3	14.8	81.1
MGA_899	LOCUS_08980	sequence1:890684..891604(-)	frameshift		890887	WP_003404767.1	hypothetical protein	80.7	69.0	87.0
MGA_904	LOCUS_09030	sequence1:895781..896389(-)	frameshift		895848,896469	WP_003404782.1	serine/threonine protein kinase PknD	89.6	27.3	68.0
MGA_905	LOCUS_09040	sequence1:896389..897753(-)	frameshift		896469	WP_003404782.1	serine/threonine protein kinase PknD	90.3	57.2	66.3
MGA_911	LOCUS_09100	sequence1:905443..906951(-)	partial			WP_010950464.1	PE family protein	28.7	23.8	55.2
MGA_918	LOCUS_09170	sequence1:912521..913444(-)	partial			WP_011730613.1	diiron oxygenase	98.0	73.1	72.8
MGA_920	LOCUS_09190	sequence1:914505..916211(+)	partial			WP_010950464.1	PE family protein	20.2	18.9	56.5
MGA_921	LOCUS_09200	sequence1:916287..917996(+)	partial			WP_099318959.1	PE family protein	21.8	27.1	58.9
MGA_922	LOCUS_09210	sequence1:918115..919176(+)	partial			WP_099318959.1	PE family protein	37.1	28.6	56.5
MGA_923	LOCUS_09220	sequence1:919224..919427(+)	frameshift,internal_stop_codon	919461..919463(+)	919388	WP_005082947.1	Fpg/Nei family DNA glycosylase	95.5	22.3	73.4
MGA_924	LOCUS_09230	sequence1:919487..920086(+)	frameshift,internal_stop_codon	919461..919463(+)	919388	WP_011730610.1	Fpg/Nei family DNA glycosylase	100.0	68.1	81.9
MGA_928	LOCUS_09270	sequence1:923765..924037(-)	partial			WP_003404838.1	chorismate mutase	86.7	74.3	75.6
MGA_929	LOCUS_09280	sequence1:924540..926174(+)	partial			WP_003904469.1	PPE family protein	56.2	42.3	42.2
MGA_930	LOCUS_09290	sequence1:926450..927496(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_931	LOCUS_09300	sequence1:927578..927853(+)	partial			WP_010950839.1	PPE family protein	80.2	14.3	47.1
MGA_933	LOCUS_09320	sequence1:930322..930624(-)	frameshift,internal_stop_codon	930742..930744(-)	930762,930684	WP_011730597.1	hypothetical protein	97.0	42.7	55.7
MGA_938	LOCUS_09370	sequence1:934423..935511(-)	partial			WP_010886177.1	PE family protein	36.2	22.4	58.8
MGA_970	LOCUS_09690	sequence1:971789..972910(+)	partial			WP_008767823.1	glycosyltransferase family 4 protein	37.3	34.7	32.1
MGA_971	LOCUS_09700	sequence1:973004..973765(+)	partial			WP_033448326.1	bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG	45.1	45.2	41.4
MGA_977	LOCUS_09760	sequence1:979614..980564(+)	partial			WP_082769289.1	class I SAM-dependent methyltransferase	78.2	74.6	52.6
MGA_979	LOCUS_09780	sequence1:981742..983622(-)	partial			WP_005094336.1	glycosyltransferase family 2 protein	31.0	66.6	31.7
MGA_982	LOCUS_09810	sequence1:986631..987677(-)	partial			WP_012257358.1	WecB/TagA/CpsF family glycosyltransferase	47.7	32.9	38.6
MGA_990	LOCUS_09890	sequence1:993779..994360(+)	internal_stop_codon	993677..993679(+)		WP_003405165.1	DUF5642 family protein	99.0	75.8	72.3
MGA_995	LOCUS_09940	sequence1:998711..999838(-)	internal_stop_codon	999941..999943(-)		WP_003910253.1	hypothetical protein	69.6	63.7	35.5
MGA_1007	LOCUS_10060	sequence1:1014543..1016054(-)	partial			WP_010886177.1	PE family protein	25.6	20.9	47.3
MGA_1024	LOCUS_10230	sequence1:1033900..1034193(+)	partial			WP_005110193.1	hypothetical protein	78.4	74.0	55.8
MGA_1032	LOCUS_10310	sequence1:1041147..1042601(+)	partial			WP_164922023.1	adenylate/guanylate cyclase domain-containing protein	78.5	68.3	29.8
MGA_1036	LOCUS_10350	sequence1:1044969..1045148(-)	internal_stop_codon	1044969..1044971(-)		WP_011726768.1	IS1380-like element ISMsm3 family transposase	83.1	10.5	79.6
MGA_1038	LOCUS_10370	sequence1:1045876..1046922(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1044	LOCUS_10430	sequence1:1052355..1053287(+)	partial			WP_003898458.1	siderophore RND transporter MmpL4	91.6	29.8	70.8
MGA_1045	LOCUS_10440	sequence1:1053505..1054551(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1046	LOCUS_10450	sequence1:1054590..1056500(+)	partial			WP_003898458.1	siderophore RND transporter MmpL4	99.2	65.3	73.7
MGA_1058	LOCUS_10570	sequence1:1069851..1070336(+)	internal_stop_codon	1070334..1070336(+)		WP_011729097.1	hypothetical protein	100.0	61.9	58.4
MGA_1059	LOCUS_10580	sequence1:1070349..1070627(+)	internal_stop_codon	1070334..1070336(+)		WP_011729097.1	hypothetical protein	95.7	33.8	77.3
MGA_1061	LOCUS_10600	sequence1:1070834..1072273(+)	partial			WP_011388984.1	esterase-like activity of phytase family protein	74.7	83.1	29.9
MGA_1066	LOCUS_10650	sequence1:1077187..1078077(+)	internal_stop_codon	1078075..1078077(+)		WP_003405629.1	hypothetical protein	100.0	83.6	88.5
MGA_1067	LOCUS_10660	sequence1:1078090..1078245(+)	internal_stop_codon	1078075..1078077(+)		WP_003405629.1	hypothetical protein	98.0	14.1	90.0
MGA_1072	LOCUS_10710	sequence1:1083616..1086093(+)	partial			WP_010950451.1	PE family protein	14.5	14.3	50.0
MGA_1080	LOCUS_10790	sequence1:1091264..1093729(-)	partial			WP_010886090.1	PE family protein	14.4	13.8	54.9
MGA_1082	LOCUS_10810	sequence1:1094603..1095706(-)	frameshift		1094344,1094345,1095007	WP_010886133.1	PE family protein	32.2	23.7	57.6
MGA_1083	LOCUS_10820	sequence1:1095958..1097289(-)	frameshift,internal_stop_codon	1097310..1097312(-)	1097429	WP_003405708.1	alpha/beta-hydrolase family protein	100.0	75.5	82.4
MGA_1091	LOCUS_10900	sequence1:1106038..1106841(+)	frameshift		1106018,1106021	WP_003405732.1	RDD family protein	62.2	69.2	83.1
MGA_1115	LOCUS_11140	sequence1:1129882..1130463(+)	frameshift		1129799	WP_003405815.1	DUF4245 domain-containing protein	99.5	82.4	76.0
MGA_1117	LOCUS_11160	sequence1:1131285..1132217(-)	partial			WP_003898727.1	AI-2E family transporter	82.3	66.2	83.5
MGA_1118	LOCUS_11170	sequence1:1132540..1133586(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1119	LOCUS_11180	sequence1:1133552..1133803(-)	partial			WP_003898727.1	AI-2E family transporter	79.5	17.1	83.3
MGA_1121	LOCUS_11200	sequence1:1135851..1137416(-)	partial			WP_003911027.1	PE family protein	22.6	26.9	60.2
MGA_1131	LOCUS_11300	sequence1:1146333..1146836(+)	frameshift		1146704	WP_010950951.1	type VII secretion system ESX-1 associated protein EspJ	74.3	44.6	49.6
MGA_1133	LOCUS_11320	sequence1:1147130..1147960(-)	frameshift		1148051	WP_010950952.1	type VII secretion system ESX-1 associated protein EspK	95.3	35.2	59.3
MGA_1136	LOCUS_11350	sequence1:1150223..1150537(-)	partial			WP_010950952.1	type VII secretion system ESX-1 associated protein EspK	93.3	13.0	66.0
MGA_1140	LOCUS_11390	sequence1:1152060..1153106(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1141	LOCUS_11400	sequence1:1153072..1153341(-)	partial			WP_003399988.1	type VII secretion system ESX-1 associated protein EspL	77.5	60.0	60.9
MGA_1142	LOCUS_11410	sequence1:1153338..1154342(-)	partial			WP_003399995.1	type VII secretion system ESX-1 target EspB	99.1	72.0	37.2
MGA_1143	LOCUS_11420	sequence1:1154364..1155410(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1145	LOCUS_11440	sequence1:1157237..1157608(+)	frameshift,internal_stop_codon	1157606..1157608(+),1157618..1157620(+)	1157629	WP_003898733.1	hypothetical protein	100.0	53.0	79.7
MGA_1148	LOCUS_11470	sequence1:1159076..1159777(-)	frameshift		1159782	WP_003898734.1	hypothetical protein	98.7	80.8	77.9
MGA_1150	LOCUS_11490	sequence1:1161345..1162544(+)	frameshift		1162251,1161315	WP_003898735.1	glucose-6-phosphate dehydrogenase	75.7	64.8	83.1
MGA_1154	LOCUS_11530	sequence1:1164878..1165465(-)	partial			WP_010908039.1	TetR/AcrR family transcriptional regulator	45.6	61.3	59.6
MGA_1165	LOCUS_11640	sequence1:1177207..1178385(-)	partial			WP_005064806.1	TetR/AcrR family transcriptional regulator	32.7	56.9	32.4
MGA_1166	LOCUS_11650	sequence1:1179199..1180170(+)	frameshift		1180000,1179978	WP_010950832.1	PPE family protein	100.0	83.1	47.4
MGA_1167	LOCUS_11660	sequence1:1181017..1182063(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1168	LOCUS_11670	sequence1:1183148..1183762(+)	partial			WP_030568499.1	IS110 family transposase	98.0	48.1	44.5
MGA_1171	LOCUS_11700	sequence1:1186839..1187825(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	66.2	58.2	31.6
MGA_1172	LOCUS_11710	sequence1:1187779..1188096(+)	partial			WP_010950605.1	PPE family protein	89.5	14.2	47.9
MGA_1173	LOCUS_11720	sequence1:1188162..1190066(-)	partial			WP_003405919.1	PPE family protein	69.1	70.9	56.8
MGA_1174	LOCUS_11730	sequence1:1190370..1191416(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.1
MGA_1175	LOCUS_11740	sequence1:1191413..1192855(-)	partial			WP_003405919.1	PPE family protein	90.8	66.7	43.4
MGA_1176	LOCUS_11750	sequence1:1193262..1194308(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1199	LOCUS_11980	sequence1:1219731..1220003(-)	frameshift		1220022	WP_003898744.1	class I SAM-dependent methyltransferase	98.9	31.6	73.0
MGA_1200	LOCUS_11990	sequence1:1219993..1220568(-)	frameshift		1220022	WP_003898744.1	class I SAM-dependent methyltransferase	91.6	62.1	81.7
MGA_1201	LOCUS_12000	sequence1:1220583..1221098(-)	frameshift		1221098,1221131,1221150	WP_009936776.1	DUF1697 domain-containing protein	100.0	82.6	73.3
MGA_1205	LOCUS_12040	sequence1:1223620..1224456(-)	internal_stop_codon	1223620..1223622(-)		WP_011072192.1	ISAs1-like element ISSod22 family transposase	84.9	63.0	30.1
MGA_1208	LOCUS_12070	sequence1:1226790..1227836(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1209	LOCUS_12080	sequence1:1227872..1228348(+)	partial			WP_003406064.1	HhH-GPD-type base excision DNA repair protein	91.8	74.4	86.9
MGA_1211	LOCUS_12100	sequence1:1228551..1229768(-)	frameshift,internal_stop_codon	1229818..1229820(-)	1229456,1229796,1229495	WP_003406066.1	hypothetical protein	35.1	38.3	86.6
MGA_1219	LOCUS_12180	sequence1:1237193..1239394(+)	partial			WP_010950373.1	PE family protein	78.6	68.8	29.7
MGA_1220	LOCUS_12190	sequence1:1239582..1240712(+)	partial			WP_010886133.1	PE family protein	26.9	20.3	50.5
MGA_1223	LOCUS_12220	sequence1:1242646..1243005(+)	internal_stop_codon	1242562..1242564(+)		WP_003406163.1	hypothetical protein	96.6	78.8	72.2
MGA_1226	LOCUS_12250	sequence1:1247248..1247556(+)	internal_stop_codon	1247554..1247556(+)		WP_010950415.1	PE family protein	92.2	7.2	51.1
MGA_1234	LOCUS_12330	sequence1:1258127..1258654(+)	frameshift		1258573	WP_013531929.1	FAD-dependent monooxygenase	97.1	33.5	62.9
MGA_1235	LOCUS_12340	sequence1:1258669..1259637(+)	frameshift		1258576	WP_013531929.1	FAD-dependent monooxygenase	92.2	60.4	69.7
MGA_1237	LOCUS_12360	sequence1:1260450..1261664(-)	frameshift		1260497,1260485,1260494	WP_003911027.1	PE family protein	35.1	31.0	53.5
MGA_1238	LOCUS_12370	sequence1:1261875..1262954(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	75.5	72.4	30.6
MGA_1239	LOCUS_12380	sequence1:1263230..1264720(-)	internal_stop_codon	1264724..1264726(-)		WP_164928895.1	fatty acyl-AMP ligase	86.7	74.1	47.5
MGA_1243	LOCUS_12420	sequence1:1267266..1267538(-)	frameshift		1267560	WP_003417776.1	roadblock/LC7 domain-containing protein	80.0	55.4	84.7
MGA_1247	LOCUS_12460	sequence1:1271962..1273776(+)	frameshift		1273774,1273149,1273174	WP_010886116.1	PE family protein	20.2	24.8	53.3
MGA_1249	LOCUS_12480	sequence1:1274773..1275819(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1252	LOCUS_12510	sequence1:1278619..1279479(-)	frameshift		1279504	WP_003899661.1	PPE domain-containing protein	52.8	45.1	24.5
MGA_1254	LOCUS_12530	sequence1:1279943..1280989(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_1255	LOCUS_12540	sequence1:1282051..1282395(-)	partial			WP_165447243.1	nitrate/nitrite transporter	87.7	21.7	51.5
MGA_1256	LOCUS_12550	sequence1:1282807..1284144(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	60.9	72.4	30.2
MGA_1259	LOCUS_12580	sequence1:1287614..1288480(-)	frameshift		1288539,1287783	WP_003408545.1	ATP transporter ATP-binding protein/permease	79.9	26.6	63.9
MGA_1260	LOCUS_12590	sequence1:1288408..1290276(-)	frameshift		1288539	WP_003408545.1	ATP transporter ATP-binding protein/permease	91.6	64.9	66.7
MGA_1267	LOCUS_12660	sequence1:1295435..1301776(+)	frameshift		1301323,1301374,1301735	WP_067456433.1	type I polyketide synthase	70.0	37.2	47.5
MGA_1268	LOCUS_12670	sequence1:1301797..1305216(+)	frameshift		1301734	WP_067456433.1	type I polyketide synthase	58.1	17.2	46.0
MGA_1270	LOCUS_12690	sequence1:1305614..1306042(-)	partial			WP_005084922.1	heme-binding protein	62.7	80.9	62.9
MGA_1274	LOCUS_12730	sequence1:1309647..1309994(+)	frameshift		1309964	WP_003417452.1	NADP-dependent isocitrate dehydrogenase	99.1	27.9	85.1
MGA_1275	LOCUS_12740	sequence1:1309928..1310872(+)	frameshift		1309964	WP_003417452.1	NADP-dependent isocitrate dehydrogenase	96.2	73.8	89.7
MGA_1285	LOCUS_12840	sequence1:1321242..1323548(-)	frameshift,internal_stop_codon	1322249..1322251(-),1321265..1321267(-),1322843..1322845(-),1321242..1321244(-),1321266..1321268(-)	1322081,1321282,1322812,1321736,1322090,1321259,1321261,1321806,1321199,1321268,1322164,1321270,1322170,1322108,1322047	WP_010886084.1	PE family protein	16.4	16.1	50.0
MGA_1287	LOCUS_12860	sequence1:1324924..1326447(+)	partial			WP_010950639.1	PecA family PE domain-processing aspartic protease	30.4	27.6	47.4
MGA_1289	LOCUS_12880	sequence1:1327097..1327696(-)	partial			WP_003905037.1	IS110 family transposase	97.5	34.0	81.4
MGA_1291	LOCUS_12900	sequence1:1328456..1329811(+)	frameshift		1329769,1329772	WP_010950748.1	PE family protein	32.8	27.7	59.6
MGA_1303	LOCUS_13020	sequence1:1340202..1341887(-)	frameshift,internal_stop_codon	1341272..1341274(-)	1340306,1340308,1341076,1340309,1340300,1340270	WP_010886112.1	PE family protein	25.3	23.7	57.3
MGA_1304	LOCUS_13030	sequence1:1342290..1343336(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1305	LOCUS_13040	sequence1:1343612..1344916(-)	partial			WP_010886112.1	PE family protein	11.5	8.3	70.0
MGA_1306	LOCUS_13050	sequence1:1345367..1346413(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_1330	LOCUS_13290	sequence1:1374934..1375194(+)	internal_stop_codon	1375192..1375194(+)		WP_003891444.1	magnesium transporter CorA family protein	93.0	24.0	57.5
MGA_1331	LOCUS_13300	sequence1:1375204..1375932(+)	internal_stop_codon	1375192..1375194(+)		WP_003891444.1	magnesium transporter CorA family protein	97.9	72.8	68.7
MGA_1332	LOCUS_13310	sequence1:1376137..1376889(+)	internal_stop_codon	1376887..1376889(+)		WP_003417215.1	RluA family pseudouridine synthase	97.2	79.7	80.7
MGA_1336	LOCUS_13350	sequence1:1381768..1382859(+)	partial			WP_003404747.1	PPE family protein	59.8	54.4	37.2
MGA_1339	LOCUS_13380	sequence1:1384612..1386303(-)	internal_stop_codon	1386304..1386306(-)		WP_010950866.1	ATP-dependent helicase	100.0	36.3	76.7
MGA_1340	LOCUS_13390	sequence1:1386304..1389231(-)	internal_stop_codon	1386304..1386306(-)		WP_003912132.1	ATP-dependent helicase	99.0	63.3	82.5
MGA_1347	LOCUS_13460	sequence1:1395309..1395620(+)	partial			WP_003417162.1	protein UsfY	99.0	74.5	81.4
MGA_1351	LOCUS_13500	sequence1:1398690..1400876(+)	partial			WP_004530004.1	AMP-binding protein	50.5	29.0	30.2
MGA_1352	LOCUS_13510	sequence1:1400782..1408050(+)	frameshift		1400726	WP_011267345.1	non-ribosomal peptide synthetase	73.3	65.5	30.2
MGA_1357	LOCUS_13560	sequence1:1411984..1412304(-)	partial			WP_003900000.1	acyl-CoA carboxylase subunit epsilon	99.1	71.2	54.1
MGA_1361	LOCUS_13600	sequence1:1415458..1416141(-)	frameshift,internal_stop_codon	1416147..1416149(-)	1416197	WP_003899998.1	GtrA family protein	100.0	82.0	82.3
MGA_1371	LOCUS_13700	sequence1:1427276..1427734(+)	internal_stop_codon	1427732..1427734(+)		WP_003898774.1	CocE/NonD family hydrolase	97.4	26.4	50.7
MGA_1372	LOCUS_13710	sequence1:1427801..1428982(+)	internal_stop_codon	1427732..1427734(+)		WP_003898774.1	CocE/NonD family hydrolase	97.5	67.9	56.7
MGA_1391	LOCUS_13900	sequence1:1447813..1448610(-)	frameshift		1448726	WP_003899988.1	hypothetical protein	100.0	55.9	77.0
MGA_1392	LOCUS_13910	sequence1:1448646..1449221(-)	frameshift		1448732	WP_003899988.1	hypothetical protein	82.2	33.1	77.1
MGA_1400	LOCUS_13990	sequence1:1456687..1458375(+)	partial			WP_010950732.1	PecA family PE domain-processing aspartic protease	60.3	68.1	46.0
MGA_1401	LOCUS_14000	sequence1:1458818..1459864(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1402	LOCUS_14010	sequence1:1460166..1461155(+)	partial			WP_003906993.1	PPE family protein	97.9	57.5	43.4
MGA_1403	LOCUS_14020	sequence1:1461156..1462202(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.5
MGA_1404	LOCUS_14030	sequence1:1462601..1463392(+)	internal_stop_codon	1463390..1463392(+)		WP_010886120.1	PPE family protein	99.2	37.2	47.6
MGA_1413	LOCUS_14120	sequence1:1474034..1474648(+)	internal_stop_codon	1474646..1474648(+)		WP_003900661.1	MFS transporter	86.8	16.9	72.3
MGA_1414	LOCUS_14130	sequence1:1474652..1477264(+)	internal_stop_codon	1474646..1474648(+)		WP_003900661.1	MFS transporter	99.8	82.8	70.5
MGA_1416	LOCUS_14150	sequence1:1478042..1479088(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1419	LOCUS_14180	sequence1:1481212..1481547(-)	partial			WP_003416932.1	Rv3235 family protein	100.0	52.6	67.9
MGA_1431	LOCUS_14300	sequence1:1493428..1494399(+)	frameshift		1494219,1494246,1494207	WP_013226953.1	helix-turn-helix domain-containing protein	76.2	58.7	33.7
MGA_1432	LOCUS_14310	sequence1:1494399..1494734(+)	partial			WP_013226953.1	helix-turn-helix domain-containing protein	90.1	23.8	45.0
MGA_1435	LOCUS_14340	sequence1:1499270..1500358(+)	partial			WP_011727145.1	EspA/EspE family type VII secretion system effector	42.0	83.9	28.9
MGA_1438	LOCUS_14370	sequence1:1501146..1501445(+)	frameshift		1501132	WP_003419545.1	type VII secretion system ESX-1 target EspD	99.0	51.6	43.0
MGA_1450	LOCUS_14490	sequence1:1511860..1512381(-)	partial			WP_003416883.1	diacylglycerol kinase family lipid kinase	98.3	53.0	60.0
MGA_1451	LOCUS_14500	sequence1:1512900..1513946(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_1452	LOCUS_14510	sequence1:1513947..1514201(-)	partial			WP_003416883.1	diacylglycerol kinase family lipid kinase	92.9	24.3	62.8
MGA_1461	LOCUS_14600	sequence1:1520909..1521484(+)	frameshift,internal_stop_codon	1521483..1521485(+)	1520894	WP_003416873.1	ferritin-like fold-containing protein	100.0	82.7	87.4
MGA_1477	LOCUS_14760	sequence1:1539346..1540392(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_1490	LOCUS_14890	sequence1:1553926..1554228(+)	internal_stop_codon	1553893..1553895(+)		WP_013222011.1	FKBP-type peptidyl-prolyl cis-trans isomerase	97.0	78.2	79.4
MGA_1500	LOCUS_14990	sequence1:1564783..1565337(+)	internal_stop_codon	1565335..1565337(+)		WP_010950737.1	DUF2652 domain-containing protein	100.0	75.1	75.5
MGA_1502	LOCUS_15010	sequence1:1565566..1565958(+)	partial			WP_003900651.1	hypothetical protein	67.7	58.1	62.4
MGA_1508	LOCUS_15070	sequence1:1570559..1570996(+)	internal_stop_codon	1570994..1570996(+)		WP_029104523.1	LLM class F420-dependent oxidoreductase	99.3	44.2	76.4
MGA_1509	LOCUS_15080	sequence1:1571054..1571401(+)	internal_stop_codon	1570994..1570996(+)		WP_029104523.1	LLM class F420-dependent oxidoreductase	100.0	34.0	67.0
MGA_1510	LOCUS_15090	sequence1:1571463..1572542(-)	frameshift		1572640,1571714,1571668,1572637	WP_010950436.1	PE family protein	18.1	8.2	60.0
MGA_1518	LOCUS_15170	sequence1:1579717..1580910(+)	partial			WP_003906993.1	PPE family protein	98.2	63.4	43.5
MGA_1519	LOCUS_15180	sequence1:1581186..1582232(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_1520	LOCUS_15190	sequence1:1582254..1582973(+)	partial			WP_003405919.1	PPE family protein	98.7	34.8	42.6
MGA_1535	LOCUS_15340	sequence1:1598961..1600301(+)	partial			WP_003901551.1	PPE family protein	38.8	42.3	70.5
MGA_1536	LOCUS_15350	sequence1:1600685..1601701(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	80.2	72.4	30.2
MGA_1537	LOCUS_15360	sequence1:1601981..1603027(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_1548	LOCUS_15470	sequence1:1611630..1612439(-)	partial			WP_011728131.1	alpha/beta fold hydrolase	98.9	64.3	80.1
MGA_1549	LOCUS_15480	sequence1:1612775..1613821(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1550	LOCUS_15490	sequence1:1613822..1614196(-)	partial			WP_011728131.1	alpha/beta fold hydrolase	92.7	28.1	88.7
MGA_1552	LOCUS_15510	sequence1:1615766..1616812(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1553	LOCUS_15520	sequence1:1617173..1617517(+)	partial			WP_011391058.1	transposase	66.7	49.3	45.5
MGA_1562	LOCUS_15610	sequence1:1626334..1626546(+)	partial			WP_003416383.1	hypothetical protein	97.1	60.9	73.5
MGA_1563	LOCUS_15620	sequence1:1626565..1626744(-)	partial			WP_003416381.1	PPE family protein	98.3	14.7	74.1
MGA_1566	LOCUS_15650	sequence1:1628047..1628727(-)	partial			WP_003416381.1	PPE family protein	97.8	56.3	63.3
MGA_1576	LOCUS_15750	sequence1:1639237..1640844(+)	partial			WP_003405897.1	HNH endonuclease signature motif containing protein	64.7	76.5	62.7
MGA_1581	LOCUS_15800	sequence1:1646046..1646546(+)	partial			WP_003416124.1	hypothetical protein	39.2	44.1	64.6
MGA_1587	LOCUS_15860	sequence1:1650410..1651456(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1588	LOCUS_15870	sequence1:1651457..1651843(-)	frameshift		1651920	WP_011730306.1	EspA/EspE family type VII secretion system effector	92.2	14.8	39.8
MGA_1589	LOCUS_15880	sequence1:1651846..1653378(-)	partial			WP_010950653.1	alpha/beta hydrolase	41.6	32.3	60.8
MGA_1601	LOCUS_16000	sequence1:1664714..1665760(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1602	LOCUS_16010	sequence1:1666530..1666877(+)	internal_stop_codon	1666875..1666877(+)		WP_010950872.1	PPE family protein	99.1	8.5	49.1
MGA_1603	LOCUS_16020	sequence1:1666881..1667600(+)	partial			WP_003901542.1	triacylglycerol lipase LipY	95.0	46.7	52.0
MGA_1604	LOCUS_16030	sequence1:1667597..1668643(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	29.9
MGA_1605	LOCUS_16040	sequence1:1668947..1669408(+)	internal_stop_codon	1669406..1669408(+)		WP_003901542.1	triacylglycerol lipase LipY	99.3	30.7	69.1
MGA_1607	LOCUS_16060	sequence1:1670643..1671089(+)	partial			WP_030862061.1	pyridoxamine 5'-phosphate oxidase family protein	86.5	41.7	35.7
MGA_1611	LOCUS_16100	sequence1:1674919..1675407(+)	partial			WP_003418931.1	LppP/LprE family lipoprotein	88.3	62.7	43.4
MGA_1614	LOCUS_16130	sequence1:1677374..1678390(+)	frameshift		1678303	WP_003416097.1	acyl-CoA dehydrogenase family protein	86.7	77.9	79.5
MGA_1624	LOCUS_16230	sequence1:1688028..1689452(-)	frameshift		1688138	WP_011728547.1	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB	89.9	83.6	75.4
MGA_1626	LOCUS_16250	sequence1:1690694..1691038(-)	partial			WP_011391058.1	transposase	66.7	49.3	45.5
MGA_1627	LOCUS_16260	sequence1:1691399..1692445(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_1628	LOCUS_16270	sequence1:1692907..1693671(+)	frameshift		1692907	WP_003891984.1	DUF808 domain-containing protein	98.4	78.7	65.9
MGA_1634	LOCUS_16330	sequence1:1698819..1699880(-)	internal_stop_codon	1699953..1699955(-)		WP_011728345.1	YdiU family protein	100.0	72.3	62.2
MGA_1635	LOCUS_16340	sequence1:1699953..1700282(-)	internal_stop_codon	1699953..1699955(-)		WP_011728345.1	YdiU family protein	99.1	22.3	63.9
MGA_1642	LOCUS_16410	sequence1:1706318..1706494(-)	frameshift		1706580	WP_005082635.1	NAD(P)/FAD-dependent oxidoreductase	79.3	9.7	82.6
MGA_1643	LOCUS_16420	sequence1:1706491..1707741(-)	frameshift		1706580	WP_005082635.1	NAD(P)/FAD-dependent oxidoreductase	91.6	80.5	72.4
MGA_1644	LOCUS_16430	sequence1:1707738..1709285(-)	frameshift,internal_stop_codon	1709318..1709320(-)	1709236	WP_003405912.1	DUF3556 domain-containing protein	92.0	81.2	39.2
MGA_1648	LOCUS_16470	sequence1:1712071..1712685(-)	frameshift,internal_stop_codon	1712709..1712711(-)	1712711	WP_003416051.1	HNH endonuclease signature motif containing protein	100.0	48.1	80.4
MGA_1649	LOCUS_16480	sequence1:1712685..1713347(-)	frameshift,internal_stop_codon	1712709..1712711(-)	1712711	WP_003416051.1	HNH endonuclease signature motif containing protein	96.8	50.2	72.8
MGA_1660	LOCUS_16590	sequence1:1725628..1725864(-)	internal_stop_codon	1725628..1725630(-)		WP_010886173.1	PE family protein	100.0	10.9	62.8
MGA_1662	LOCUS_16610	sequence1:1726831..1727877(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_1668	LOCUS_16670	sequence1:1732995..1733597(+)	frameshift		1732754,1732946	WP_085976166.1	IS3 family transposase	98.0	51.2	45.7
MGA_1670	LOCUS_16690	sequence1:1734225..1734809(-)	partial			WP_010950451.1	PE family protein	44.8	10.5	40.2
MGA_1671	LOCUS_16700	sequence1:1735193..1735699(+)	frameshift,internal_stop_codon	1735181..1735183(+)	1735690	WP_051618845.1	GMC family oxidoreductase	97.6	23.9	43.1
MGA_1672	LOCUS_16710	sequence1:1735708..1736886(+)	frameshift,internal_stop_codon	1736885..1736887(+)	1735690	WP_051618845.1	GMC family oxidoreductase	99.7	56.6	49.4
MGA_1673	LOCUS_16720	sequence1:1736902..1737273(+)	internal_stop_codon	1736884..1736886(+)		WP_051618845.1	GMC family oxidoreductase	78.0	14.3	52.0
MGA_1677	LOCUS_16760	sequence1:1740316..1741176(+)	frameshift		1740238	WP_013224377.1	wax ester/triacylglycerol synthase family O-acyltransferase	81.1	50.3	40.5
MGA_1680	LOCUS_16790	sequence1:1744297..1745439(-)	frameshift		1745444,1744349	WP_011731217.1	alkyl sulfatase dimerization domain-containing protein	96.3	58.3	74.3
MGA_1681	LOCUS_16800	sequence1:1745334..1746197(-)	frameshift		1745444	WP_011731217.1	alkyl sulfatase dimerization domain-containing protein	89.2	41.1	73.5
MGA_1684	LOCUS_16830	sequence1:1747285..1747476(-)	frameshift		1747317	WP_003416005.1	TetR/AcrR family transcriptional regulator	87.3	27.2	65.5
MGA_1689	LOCUS_16880	sequence1:1751453..1752565(-)	frameshift		1752566	WP_003917116.1	carbon starvation CstA family protein	99.7	48.7	69.9
MGA_1694	LOCUS_16930	sequence1:1756685..1757293(+)	partial			WP_014877829.1	hypothetical protein	58.9	72.0	38.6
MGA_1698	LOCUS_16970	sequence1:1760475..1761521(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1703	LOCUS_17020	sequence1:1766494..1766850(-)	partial			WP_011730106.1	OB-fold domain-containing protein	77.1	16.7	40.2
MGA_1704	LOCUS_17030	sequence1:1766901..1768094(+)	partial			WP_011730106.1	OB-fold domain-containing protein	98.7	69.3	43.2
MGA_1714	LOCUS_17130	sequence1:1776696..1778306(+)	partial			WP_211695346.1	PPE family protein	99.1	16.4	52.7
MGA_1715	LOCUS_17140	sequence1:1778586..1779632(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_1716	LOCUS_17150	sequence1:1779708..1781999(+)	frameshift,internal_stop_codon	1780459..1780461(+)	1780504,1781682,1780424,1780491,1781420	WP_211695346.1	PPE family protein	96.5	22.4	49.9
MGA_1723	LOCUS_17220	sequence1:1788430..1788876(-)	partial			WP_013229702.1	SRPBCC family protein	75.0	69.6	37.5
MGA_1752	LOCUS_17510	sequence1:1818699..1819202(+)	partial			WP_013226322.1	MarR family winged helix-turn-helix transcriptional regulator	70.7	75.0	32.2
MGA_1757	LOCUS_17560	sequence1:1822492..1822671(-)	internal_stop_codon	1822492..1822494(-)		WP_036462762.1	TIGR01777 family oxidoreductase	93.2	12.3	72.7
MGA_1758	LOCUS_17570	sequence1:1822738..1823715(+)	partial			WP_003114566.1	oxidoreductase	68.9	76.1	35.9
MGA_1771	LOCUS_17700	sequence1:1836303..1836566(+)	partial			WP_003899860.1	radical SAM protein	48.3	9.6	71.4
MGA_1773	LOCUS_17720	sequence1:1837549..1837938(+)	partial			WP_003899860.1	radical SAM protein	83.7	24.7	63.9
MGA_1799	LOCUS_17980	sequence1:1867305..1868612(-)	frameshift		1868626	WP_003898435.1	RND transporter MmpL1	96.3	43.7	77.1
MGA_1800	LOCUS_17990	sequence1:1868609..1870165(-)	frameshift		1868626	WP_003898435.1	RND transporter MmpL1	96.7	52.3	70.3
MGA_1801	LOCUS_18000	sequence1:1870162..1870743(-)	partial			WP_003402074.1	MmpS family protein	42.5	57.7	67.1
MGA_1802	LOCUS_18010	sequence1:1870712..1871758(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1803	LOCUS_18020	sequence1:1871724..1871966(-)	partial			WP_003402074.1	MmpS family protein	78.8	44.4	55.6
MGA_1804	LOCUS_18030	sequence1:1872185..1873186(-)	frameshift		1873200	WP_011963911.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	97.6	79.0	45.2
MGA_1809	LOCUS_18080	sequence1:1877029..1877691(+)	partial			WP_003415107.1	DNA-binding protein HupB	49.5	50.9	97.2
MGA_1835	LOCUS_18340	sequence1:1905493..1905840(+)	internal_stop_codon	1905838..1905840(+)		WP_003414922.1	PGL/p-HBAD biosynthesis rhamnosyltransferase	90.4	23.2	79.8
MGA_1836	LOCUS_18350	sequence1:1905937..1906296(+)	frameshift,internal_stop_codon	1905838..1905840(+)	1906272	WP_003414922.1	PGL/p-HBAD biosynthesis rhamnosyltransferase	94.1	24.9	80.4
MGA_1837	LOCUS_18360	sequence1:1906293..1906754(+)	frameshift		1906275	WP_003414922.1	PGL/p-HBAD biosynthesis rhamnosyltransferase	94.1	32.1	71.5
MGA_1840	LOCUS_18390	sequence1:1909337..1909717(+)	internal_stop_codon	1909715..1909717(+)		WP_010907550.1	LLM class flavin-dependent oxidoreductase	100.0	33.0	84.9
MGA_1841	LOCUS_18400	sequence1:1909841..1910389(+)	internal_stop_codon	1909715..1909717(+)		WP_003414891.1	phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase	100.0	47.8	83.5
MGA_1850	LOCUS_18490	sequence1:1928449..1928865(+)	frameshift		1928802,1929117	WP_003414900.1	phthiotriol/phenolphthiotriol dimycocerosates methyltransferase	85.5	43.7	83.9
MGA_1851	LOCUS_18500	sequence1:1928802..1929122(+)	frameshift		1928802,1929117	WP_003414900.1	phthiotriol/phenolphthiotriol dimycocerosates methyltransferase	96.2	37.8	69.6
MGA_1893	LOCUS_18920	sequence1:1999824..2000216(-)	frameshift		2000218	WP_013227040.1	GAF and ANTAR domain-containing protein	84.6	42.9	41.2
MGA_1902	LOCUS_19010	sequence1:2008372..2008599(+)	frameshift		2008515,2008367	WP_010919272.1	lactate 2-monooxygenase	64.0	12.3	68.8
MGA_1903	LOCUS_19020	sequence1:2008541..2009329(+)	frameshift		2008515,2008367	WP_011728393.1	lactate 2-monooxygenase	100.0	67.7	80.5
MGA_1905	LOCUS_19040	sequence1:2010291..2010620(-)	internal_stop_codon	2010816..2010818(-)		WP_003414678.1	M23 family metallopeptidase	99.1	43.4	72.2
MGA_1909	LOCUS_19080	sequence1:2012770..2013063(+)	frameshift		2013057,2013060	WP_010908420.1	amidase	99.0	19.7	55.2
MGA_1910	LOCUS_19090	sequence1:2013071..2014186(+)	frameshift		2013054	WP_003414672.1	amidase	99.5	78.0	71.5
MGA_1912	LOCUS_19110	sequence1:2014911..2015393(+)	partial			WP_011727224.1	MPT63 family protein	81.9	36.5	41.2
MGA_1914	LOCUS_19130	sequence1:2016463..2017080(-)	partial			WP_003414666.1	response regulator transcription factor	90.2	73.4	57.3
MGA_1918	LOCUS_19170	sequence1:2020263..2021309(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1920	LOCUS_19190	sequence1:2022981..2024027(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1921	LOCUS_19200	sequence1:2024358..2026079(+)	partial			WP_030865945.1	LuxR C-terminal-related transcriptional regulator	75.0	54.7	40.8
MGA_1922	LOCUS_19210	sequence1:2026076..2027122(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1923	LOCUS_19220	sequence1:2027340..2029778(-)	partial			WP_003914906.1	LuxR family transcriptional regulator	73.3	52.6	37.8
MGA_1935	LOCUS_19340	sequence1:2040667..2041470(-)	internal_stop_codon	2041549..2041551(-)		WP_011728649.1	acyl-CoA dehydrogenase family protein	99.3	67.1	78.7
MGA_1936	LOCUS_19350	sequence1:2041549..2041845(-)	internal_stop_codon	2041549..2041551(-)		WP_011728649.1	acyl-CoA dehydrogenase family protein	100.0	25.3	72.0
MGA_1944	LOCUS_19430	sequence1:2048218..2049210(+)	internal_stop_codon	2049208..2049210(+)		WP_011026895.1	heavy metal translocating P-type ATPase	97.9	41.6	64.4
MGA_1945	LOCUS_19440	sequence1:2049280..2050134(+)	internal_stop_codon	2049208..2049210(+)		WP_011026895.1	heavy metal translocating P-type ATPase	93.7	33.9	56.4
MGA_1949	LOCUS_19480	sequence1:2053117..2053740(+)	frameshift		2053707	WP_174519602.1	FAD/NAD(P)-binding protein	100.0	74.2	59.9
MGA_1953	LOCUS_19520	sequence1:2056424..2056699(-)	internal_stop_codon	2056718..2056720(-)		WP_011730501.1	DUF302 domain-containing protein	81.3	55.6	52.7
MGA_1962	LOCUS_19610	sequence1:2065005..2066051(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_1983	LOCUS_19820	sequence1:2086684..2088147(+)	partial			WP_003400998.1	PE-PPE domain-containing protein	91.8	74.1	48.9
MGA_1984	LOCUS_19830	sequence1:2088113..2089159(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_1986	LOCUS_19850	sequence1:2091617..2092663(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_1987	LOCUS_19860	sequence1:2093489..2093668(-)	internal_stop_codon	2093489..2093491(-)		WP_011726740.1	plasmid pRiA4b ORF-3 family protein	64.4	16.3	71.1
MGA_1989	LOCUS_19880	sequence1:2094371..2094709(-)	frameshift,internal_stop_codon	2094353..2094355(-),2094371..2094373(-)	2094322	WP_011727590.1	IS1380-like element ISMsm11 family transposase	100.0	24.0	78.6
MGA_1990	LOCUS_19890	sequence1:2095014..2095502(-)	partial			WP_000555401.1	IS110-like element ISEc45 family transposase	80.2	34.2	40.0
MGA_1992	LOCUS_19910	sequence1:2098579..2099034(+)	frameshift,internal_stop_codon	2098458..2098460(+),2098434..2098436(+)	2098538,2098316	WP_011728521.1	IS30-like element ISMsm8 family transposase	99.3	32.2	72.0
MGA_1993	LOCUS_19920	sequence1:2099052..2100107(+)	frameshift		2099879	WP_002725028.1	acyl-CoA dehydrogenase family protein	75.8	66.5	32.8
MGA_1998	LOCUS_19970	sequence1:2102610..2102792(-)	frameshift		2103061	WP_010908538.1	pyridoxal phosphate-dependent aminotransferase	98.3	14.7	76.3
MGA_1999	LOCUS_19980	sequence1:2102732..2103808(-)	frameshift		2103061	WP_003899255.1	pyridoxal phosphate-dependent aminotransferase	69.6	62.2	77.5
MGA_2005	LOCUS_20040	sequence1:2108050..2109096(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2009	LOCUS_20080	sequence1:2112148..2112735(+)	frameshift		2112139	WP_003411717.1	CDP-diacylglycerol diphosphatase	99.0	74.2	69.4
MGA_2017	LOCUS_20160	sequence1:2119774..2120922(-)	partial			WP_013227909.1	DUF5685 family protein	86.1	69.3	52.1
MGA_2026	LOCUS_20250	sequence1:2128581..2129273(+)	partial			WP_003400998.1	PE-PPE domain-containing protein	98.7	38.3	39.1
MGA_2027	LOCUS_20260	sequence1:2129239..2130285(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.1
MGA_2028	LOCUS_20270	sequence1:2130599..2131606(+)	partial			WP_003401003.1	PE-PPE domain-containing protein	93.4	59.6	67.7
MGA_2029	LOCUS_20280	sequence1:2131897..2132223(+)	partial			WP_011726830.1	1-acyl-sn-glycerol-3-phosphate acyltransferase	94.4	37.9	49.0
MGA_2030	LOCUS_20290	sequence1:2132503..2133549(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_2031	LOCUS_20300	sequence1:2133579..2134091(+)	partial			WP_011726830.1	1-acyl-sn-glycerol-3-phosphate acyltransferase	93.5	58.0	60.4
MGA_2033	LOCUS_20320	sequence1:2135617..2136981(+)	partial			WP_010886177.1	PE family protein	28.0	21.7	60.6
MGA_2036	LOCUS_20350	sequence1:2138235..2138795(-)	internal_stop_codon	2138814..2138816(-)		WP_010907864.1	FAD-dependent oxidoreductase	100.0	40.8	67.7
MGA_2037	LOCUS_20360	sequence1:2138814..2139599(-)	internal_stop_codon	2138814..2138816(-)		WP_010950826.1	ferredoxin--NADP(+) reductase FprA	98.5	56.4	75.1
MGA_2043	LOCUS_20420	sequence1:2146608..2147654(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2044	LOCUS_20430	sequence1:2147678..2147953(+)	partial			WP_007054642.1	potassium channel family protein	87.9	38.0	52.6
MGA_2051	LOCUS_20500	sequence1:2151968..2152594(+)	partial			WP_010940624.1	class I SAM-dependent methyltransferase	51.9	43.1	35.3
MGA_2056	LOCUS_20550	sequence1:2157187..2159124(+)	partial			WP_003899240.1	Hsp70 family protein	73.6	77.0	65.3
MGA_2057	LOCUS_20560	sequence1:2159148..2159504(-)	partial			WP_223495338.1	hypothetical protein	39.0	68.6	58.3
MGA_2060	LOCUS_20590	sequence1:2162027..2163244(+)	frameshift		2162102	WP_003901363.1	apolipoprotein N-acyltransferase	90.9	73.7	68.4
MGA_2061	LOCUS_20600	sequence1:2163241..2163690(+)	partial			WP_011729750.1	SHOCT domain-containing protein	94.6	54.7	54.6
MGA_2062	LOCUS_20610	sequence1:2163966..2165012(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2063	LOCUS_20620	sequence1:2165073..2165366(+)	partial			WP_011729750.1	SHOCT domain-containing protein	97.9	40.2	43.7
MGA_2069	LOCUS_20680	sequence1:2169841..2170086(-)	partial			WP_003411608.1	hypothetical protein	93.8	45.5	76.3
MGA_2090	LOCUS_20890	sequence1:2192796..2194601(-)	frameshift,internal_stop_codon	2194872..2194874(-),2194361..2194363(-)	2194385,2194300	WP_010950436.1	PE family protein	27.6	20.3	37.3
MGA_2091	LOCUS_20900	sequence1:2194872..2195384(-)	frameshift,internal_stop_codon	2194872..2194874(-)	2195055	WP_010886084.1	PE family protein	74.1	16.1	42.1
MGA_2094	LOCUS_20930	sequence1:2197797..2198858(+)	partial			WP_003112998.1	thiamine pyrophosphate-dependent dehydrogenase E1 component subunit alpha	66.3	72.8	39.0
MGA_2106	LOCUS_21050	sequence1:2209206..2209838(-)	frameshift		2209977	WP_003411507.1	HAD family hydrolase	100.0	72.2	72.9
MGA_2111	LOCUS_21100	sequence1:2215274..2216425(+)	frameshift		2216317	WP_010886133.1	PE family protein	20.6	14.5	53.2
MGA_2115	LOCUS_21140	sequence1:2220715..2221143(+)	partial			WP_005084922.1	heme-binding protein	57.7	74.5	56.1
MGA_2117	LOCUS_21160	sequence1:2222258..2222728(+)	internal_stop_codon	2222726..2222728(+)		WP_011729712.1	wax ester/triacylglycerol synthase family O-acyltransferase	98.7	33.1	83.1
MGA_2118	LOCUS_21170	sequence1:2222768..2223571(+)	internal_stop_codon	2222726..2222728(+)		WP_011729712.1	wax ester/triacylglycerol synthase family O-acyltransferase	99.6	57.2	72.6
MGA_2127	LOCUS_21260	sequence1:2235064..2236788(-)	frameshift		2235096,2235087	WP_010950748.1	PE family protein	20.6	22.2	48.8
MGA_2134	LOCUS_21330	sequence1:2242005..2242619(+)	internal_stop_codon	2242617..2242619(+)		WP_003406574.1	ABC transporter ATP-binding protein	100.0	35.1	50.0
MGA_2135	LOCUS_21340	sequence1:2242680..2243684(+)	internal_stop_codon	2242617..2242619(+)		WP_011730254.1	ABC transporter ATP-binding protein	99.4	56.1	58.5
MGA_2143	LOCUS_21420	sequence1:2250736..2251782(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2148	LOCUS_21470	sequence1:2255404..2256450(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2149	LOCUS_21480	sequence1:2257260..2258306(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_2150	LOCUS_21490	sequence1:2258975..2260240(+)	partial			WP_010886125.1	PE domain-containing protein	95.0	43.5	31.0
MGA_2162	LOCUS_21610	sequence1:2272442..2273488(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2163	LOCUS_21620	sequence1:2273885..2274553(+)	internal_stop_codon	2274551..2274553(+)		WP_010950571.1	type I polyketide synthase	99.5	10.4	86.4
MGA_2165	LOCUS_21640	sequence1:2280268..2281191(+)	frameshift		2281032	WP_003911579.1	type I polyketide synthase	83.4	16.0	79.7
MGA_2176	LOCUS_21750	sequence1:2300222..2302255(-)	partial			WP_010886133.1	PE family protein	17.3	23.5	65.0
MGA_2177	LOCUS_21760	sequence1:2302651..2303109(-)	partial			WP_003408366.1	TetR family transcriptional regulator	99.3	72.9	71.5
MGA_2179	LOCUS_21780	sequence1:2303998..2305044(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2183	LOCUS_21820	sequence1:2308500..2309546(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.5
MGA_2185	LOCUS_21840	sequence1:2310710..2311393(-)	frameshift		2311398	WP_003898850.1	YcaO-like family protein	99.1	51.3	72.0
MGA_2209	LOCUS_22080	sequence1:2338106..2339875(-)	internal_stop_codon	2340014..2340016(-)		WP_003400794.1	non-ribosomal peptide synthetase Nrp	56.0	13.3	66.2
MGA_2210	LOCUS_22090	sequence1:2340014..2341720(-)	internal_stop_codon	2340014..2340016(-)		WP_012296729.1	non-ribosomal peptide synthetase	99.6	16.4	50.3
MGA_2211	LOCUS_22100	sequence1:2341782..2342828(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2213	LOCUS_22120	sequence1:2344795..2345139(-)	partial			WP_011391058.1	transposase	66.7	49.3	45.5
MGA_2214	LOCUS_22130	sequence1:2345500..2346546(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2223	LOCUS_22220	sequence1:2354800..2355846(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2226	LOCUS_22250	sequence1:2356786..2357748(+)	partial			WP_000985413.1	type I restriction-modification system subunit M	99.7	40.8	58.3
MGA_2227	LOCUS_22260	sequence1:2357745..2358791(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2228	LOCUS_22270	sequence1:2359113..2360597(+)	partial			WP_000985413.1	type I restriction-modification system subunit M	99.8	59.2	32.5
MGA_2229	LOCUS_22280	sequence1:2361095..2361826(+)	partial			WP_011035716.1	restriction endonuclease subunit S	93.4	54.7	33.3
MGA_2234	LOCUS_22330	sequence1:2368583..2369587(+)	partial			WP_009930934.1	hypothetical protein	78.4	63.2	27.4
MGA_2240	LOCUS_22390	sequence1:2375024..2376100(+)	partial			WP_010886118.1	PE family protein	37.4	18.1	54.5
MGA_2241	LOCUS_22400	sequence1:2376039..2376848(+)	frameshift		2376046	WP_011031745.1	glycoside hydrolase family 64 protein	91.8	62.6	28.0
MGA_2246	LOCUS_22450	sequence1:2379437..2379601(-)	partial			WP_208761996.1	transposase	72.2	24.5	74.4
MGA_2247	LOCUS_22460	sequence1:2379738..2380691(+)	partial			WP_013225221.1	galactose mutarotase	82.3	72.5	52.5
MGA_2248	LOCUS_22470	sequence1:2380688..2381734(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2249	LOCUS_22480	sequence1:2382010..2382282(-)	partial			WP_011087239.1	RidA family protein	87.8	61.4	49.4
MGA_2253	LOCUS_22520	sequence1:2386268..2386477(+)	frameshift,internal_stop_codon	2386475..2386477(+)	2386531	WP_003894403.1	GlsB/YeaQ/YmgE family stress response membrane protein	100.0	68.3	75.4
MGA_2254	LOCUS_22530	sequence1:2386785..2387069(-)	frameshift		2387085	WP_005110390.1	glycogen/starch/alpha-glucan phosphorylase	94.7	10.8	60.7
MGA_2255	LOCUS_22540	sequence1:2387038..2388642(-)	frameshift,internal_stop_codon	2388748..2388750(-)	2387085	WP_005110390.1	glycogen/starch/alpha-glucan phosphorylase	97.8	63.1	76.1
MGA_2256	LOCUS_22550	sequence1:2388748..2389302(-)	internal_stop_codon	2388748..2388750(-)		WP_005110390.1	glycogen/starch/alpha-glucan phosphorylase	88.6	19.7	80.4
MGA_2260	LOCUS_22590	sequence1:2393083..2394138(-)	partial			WP_013225324.1	serine hydrolase	86.6	28.5	26.4
MGA_2262	LOCUS_22610	sequence1:2395695..2397206(+)	frameshift		2397227,2397179,2397285	WP_011729139.1	MFS transporter	95.2	76.6	69.1
MGA_2263	LOCUS_22620	sequence1:2397337..2398758(+)	partial			WP_003911027.1	PE family protein	51.0	58.3	37.5
MGA_2264	LOCUS_22630	sequence1:2398810..2399403(-)	partial			WP_003416064.1	serine/threonine protein kinase PknK	92.4	16.5	52.7
MGA_2265	LOCUS_22640	sequence1:2399405..2400973(-)	frameshift		2399739,2401158	WP_003899905.1	serine/threonine protein kinase PknK	78.5	37.2	64.9
MGA_2266	LOCUS_22650	sequence1:2401075..2402133(-)	frameshift		2401158	WP_003899905.1	serine/threonine protein kinase PknK	88.6	28.1	71.5
MGA_2270	LOCUS_22690	sequence1:2405509..2406768(+)	partial			WP_010879270.1	amino acid permease	94.7	74.4	41.1
MGA_2273	LOCUS_22720	sequence1:2409723..2409917(+)	frameshift		2409914	WP_011729279.1	acyltransferase	78.1	11.3	80.0
MGA_2274	LOCUS_22730	sequence1:2409944..2411077(+)	frameshift		2409914	WP_011729279.1	acyltransferase	96.3	81.4	59.8
MGA_2279	LOCUS_22780	sequence1:2417679..2418212(-)	internal_stop_codon	2418246..2418248(-)		WP_029104228.1	FAD-dependent oxidoreductase	95.5	45.6	62.1
MGA_2280	LOCUS_22790	sequence1:2418246..2418803(-)	internal_stop_codon	2418246..2418248(-)		WP_029104228.1	FAD-dependent oxidoreductase	99.5	49.6	56.5
MGA_2284	LOCUS_22830	sequence1:2422690..2423391(+)	internal_stop_codon	2423389..2423391(+)		WP_003906993.1	PPE family protein	84.1	33.1	42.9
MGA_2285	LOCUS_22840	sequence1:2423476..2426295(+)	frameshift,internal_stop_codon	2423389..2423391(+)	2423376,2423461,2423895,2425849,2423962,2426175	WP_004536696.1	ESPR-type extended signal peptide-containing protein	98.0	57.8	21.8
MGA_2287	LOCUS_22860	sequence1:2427378..2428619(+)	partial			WP_005114807.1	divalent metal cation transporter	79.4	59.2	36.3
MGA_2290	LOCUS_22890	sequence1:2430823..2431914(+)	frameshift		2431800,2431818,2431812	WP_010886116.1	PE family protein	35.8	26.5	59.2
MGA_2295	LOCUS_22940	sequence1:2436780..2437628(-)	partial			WP_011029339.1	SDR family oxidoreductase	94.3	46.0	43.1
MGA_2297	LOCUS_22960	sequence1:2439141..2439608(+)	partial			WP_005479856.1	2,4'-dihydroxyacetophenone dioxygenase family protein	57.4	54.7	36.6
MGA_2301	LOCUS_23000	sequence1:2441687..2443216(+)	internal_stop_codon	2443214..2443216(+)		WP_014467867.1	molybdopterin-dependent oxidoreductase	97.1	68.1	52.0
MGA_2302	LOCUS_23010	sequence1:2443301..2443909(+)	frameshift		2443289,2443207	WP_011027934.1	molybdopterin oxidoreductase family protein	100.0	27.0	54.5
MGA_2307	LOCUS_23060	sequence1:2448113..2448475(+)	partial			WP_005086404.1	APC family permease	67.5	15.8	79.0
MGA_2308	LOCUS_23070	sequence1:2448472..2449518(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_2309	LOCUS_23080	sequence1:2449879..2450514(+)	partial			WP_011727782.1	APC family permease	98.1	39.7	70.5
MGA_2310	LOCUS_23090	sequence1:2450515..2451561(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2311	LOCUS_23100	sequence1:2451879..2452514(+)	partial			WP_011727782.1	APC family permease	90.5	36.6	64.4
MGA_2312	LOCUS_23110	sequence1:2452539..2453027(+)	internal_stop_codon	2453025..2453027(+)		WP_011030368.1	gamma-aminobutyraldehyde dehydrogenase	98.8	33.4	65.6
MGA_2313	LOCUS_23120	sequence1:2453115..2453984(+)	internal_stop_codon	2453025..2453027(+)		WP_011030368.1	gamma-aminobutyraldehyde dehydrogenase	96.5	58.0	64.2
MGA_2320	LOCUS_23190	sequence1:2462242..2463015(+)	partial			WP_004453954.1	class II aldolase/adducin family protein	59.1	70.4	28.1
MGA_2329	LOCUS_23280	sequence1:2473939..2474454(+)	internal_stop_codon	2474452..2474454(+)		WP_003408560.1	FAD-dependent oxidoreductase	100.0	37.2	88.3
MGA_2330	LOCUS_23290	sequence1:2474659..2475120(+)	internal_stop_codon	2474452..2474454(+)		WP_003408560.1	FAD-dependent oxidoreductase	97.4	32.4	80.5
MGA_2336	LOCUS_23350	sequence1:2480290..2480664(-)	partial			WP_003897321.1	hypothetical protein	96.8	57.6	47.9
MGA_2338	LOCUS_23370	sequence1:2481537..2482034(+)	frameshift		2481472	WP_005114066.1	SDR family oxidoreductase	97.0	56.3	65.6
MGA_2350	LOCUS_23490	sequence1:2489938..2490582(+)	frameshift		2490747,2490507,2490516,2490749	WP_010950464.1	PE family protein	59.8	21.1	63.3
MGA_2359	LOCUS_23580	sequence1:2500770..2503883(+)	partial			WP_010886118.1	PE family protein	11.8	16.5	65.6
MGA_2363	LOCUS_23620	sequence1:2508334..2508723(-)	internal_stop_codon	2508906..2508908(-)		WP_005081171.1	cysteine hydrolase	78.3	44.9	71.3
MGA_2365	LOCUS_23640	sequence1:2509768..2511261(-)	internal_stop_codon	2511289..2511291(-)		WP_003408781.1	DUF4407 domain-containing protein	99.4	80.1	65.8
MGA_2366	LOCUS_23650	sequence1:2511289..2511600(-)	internal_stop_codon	2511289..2511291(-)		WP_003408781.1	DUF4407 domain-containing protein	94.2	16.8	63.0
MGA_2369	LOCUS_23680	sequence1:2512727..2512984(+)	partial			WP_011729050.1	SRPBCC family protein	96.5	57.7	58.5
MGA_2379	LOCUS_23780	sequence1:2526949..2527995(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2389	LOCUS_23880	sequence1:2539885..2540118(+)	frameshift		2540109	WP_010950602.1	type VII secretion system ESX-5 target PPE26	77.9	15.3	61.7
MGA_2390	LOCUS_23890	sequence1:2540115..2541113(+)	frameshift		2540109	WP_003405368.1	PPE family protein	98.5	80.6	37.8
MGA_2398	LOCUS_23970	sequence1:2549728..2550258(-)	partial			WP_013531164.1	alpha/beta hydrolase	94.9	64.8	29.4
MGA_2399	LOCUS_23980	sequence1:2550522..2551082(+)	internal_stop_codon	2551080..2551082(+)		WP_003901259.1	sterol desaturase family protein	92.5	57.3	78.5
MGA_2400	LOCUS_23990	sequence1:2551092..2551472(+)	internal_stop_codon	2551080..2551082(+)		WP_003901259.1	sterol desaturase family protein	99.2	41.0	79.2
MGA_2404	LOCUS_24030	sequence1:2554747..2555610(-)	frameshift		2555112,2555106	WP_010950524.1	PE family protein	58.5	27.2	39.9
MGA_2405	LOCUS_24040	sequence1:2556107..2557153(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_2407	LOCUS_24060	sequence1:2559561..2560607(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_2420	LOCUS_24190	sequence1:2574740..2575966(-)	partial			WP_010886108.1	PE family protein	20.1	10.1	62.8
MGA_2422	LOCUS_24210	sequence1:2577038..2578084(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2425	LOCUS_24240	sequence1:2580608..2581000(+)	frameshift		2580989,2580629	WP_003891691.1	DUF4194 domain-containing protein	92.3	50.4	58.7
MGA_2427	LOCUS_24260	sequence1:2584622..2585278(-)	partial			WP_003903746.1	hypothetical protein	97.2	65.9	46.5
MGA_2429	LOCUS_24280	sequence1:2585575..2586273(-)	partial			WP_010950655.1	DUF5631 domain-containing protein	99.1	31.9	64.3
MGA_2432	LOCUS_24310	sequence1:2588540..2588794(-)	frameshift		2588844,2588637,2588591	WP_225580817.1	IS3 family transposase	97.6	21.2	61.0
MGA_2433	LOCUS_24320	sequence1:2589415..2591277(+)	internal_stop_codon	2591275..2591277(+)		WP_011730306.1	EspA/EspE family type VII secretion system effector	66.3	53.3	42.0
MGA_2437	LOCUS_24360	sequence1:2592968..2593258(+)	internal_stop_codon	2593256..2593258(+)		WP_003899158.1	hypothetical protein	100.0	19.7	68.8
MGA_2438	LOCUS_24370	sequence1:2593283..2594413(+)	internal_stop_codon	2593256..2593258(+)		WP_003899158.1	hypothetical protein	99.5	77.2	72.1
MGA_2449	LOCUS_24480	sequence1:2601197..2602882(+)	frameshift		2602570	WP_005114814.1	RND family transporter	79.7	47.2	72.9
MGA_2450	LOCUS_24490	sequence1:2602770..2604191(+)	frameshift		2602570	WP_005114814.1	RND family transporter	86.9	43.4	77.4
MGA_2456	LOCUS_24550	sequence1:2609338..2611890(-)	partial			WP_015445472.1	AAA family ATPase	94.0	73.6	29.2
MGA_2459	LOCUS_24580	sequence1:2613814..2614389(-)	frameshift		2614412	WP_003409355.1	SDR family oxidoreductase	97.9	65.4	52.4
MGA_2460	LOCUS_24590	sequence1:2614386..2614640(-)	frameshift		2614412	WP_003409355.1	SDR family oxidoreductase	89.3	26.2	65.3
MGA_2473	LOCUS_24720	sequence1:2628212..2630326(+)	frameshift		2630323	WP_003902238.1	apolipoprotein N-acyltransferase	85.5	66.1	73.3
MGA_2474	LOCUS_24730	sequence1:2630352..2631158(+)	frameshift		2630323,2631140	WP_003902238.1	apolipoprotein N-acyltransferase	95.5	29.3	82.4
MGA_2489	LOCUS_24880	sequence1:2655560..2655991(+)	frameshift		2655964	WP_003899143.1	ketosteroid isomerase family protein	92.3	49.8	77.3
MGA_2490	LOCUS_24890	sequence1:2656006..2656374(+)	frameshift		2655973	WP_003899143.1	ketosteroid isomerase family protein	99.2	45.7	61.2
MGA_2491	LOCUS_24900	sequence1:2656456..2657373(+)	frameshift,internal_stop_codon	2657371..2657373(+)	2657394	WP_010908336.1	sugar ABC transporter substrate-binding protein	94.1	64.5	74.9
MGA_2492	LOCUS_24910	sequence1:2657505..2657771(+)	frameshift,internal_stop_codon	2657371..2657373(+)	2657394	WP_010908336.1	sugar ABC transporter substrate-binding protein	100.0	19.8	76.1
MGA_2497	LOCUS_24960	sequence1:2661866..2662732(+)	frameshift		2662507,2662510	WP_014000955.1	PE family protein	41.7	18.8	66.7
MGA_2499	LOCUS_24980	sequence1:2663136..2663765(+)	frameshift,internal_stop_codon	2663764..2663766(+),2663332..2663334(+),2663770..2663772(+)	2663136,2663073,2663094,2663133,2663358	WP_014000955.1	PE family protein	39.2	12.8	37.8
MGA_2502	LOCUS_25010	sequence1:2665464..2666261(+)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	67.2	34.7	62.4
MGA_2503	LOCUS_25020	sequence1:2666279..2666674(+)	partial			WP_003910691.1	PPE family protein	58.0	17.3	56.6
MGA_2506	LOCUS_25050	sequence1:2669121..2670389(+)	partial			WP_011727070.1	PPE family protein	50.0	40.2	41.5
MGA_2510	LOCUS_25090	sequence1:2672147..2672653(+)	internal_stop_codon	2672651..2672653(+)		WP_005115250.1	acyl-CoA dehydrogenase family protein	85.7	40.9	33.3
MGA_2511	LOCUS_25100	sequence1:2672660..2673214(+)	internal_stop_codon	2672651..2672653(+)		WP_003895886.1	acyl-CoA dehydrogenase family protein	98.9	52.6	44.0
MGA_2519	LOCUS_25180	sequence1:2678288..2678686(+)	partial			WP_005056472.1	MerR family transcriptional regulator	50.0	71.7	65.2
MGA_2528	LOCUS_25270	sequence1:2686098..2686988(-)	internal_stop_codon	2686098..2686100(-)		WP_013223158.1	acyltransferase	99.7	66.7	33.1
MGA_2533	LOCUS_25320	sequence1:2691576..2692622(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2535	LOCUS_25340	sequence1:2693390..2694436(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2537	LOCUS_25360	sequence1:2695277..2696104(-)	frameshift		2696123	WP_003410042.1	NAD(P)/FAD-dependent oxidoreductase	95.6	49.0	76.0
MGA_2538	LOCUS_25370	sequence1:2696091..2696645(-)	frameshift		2696123	WP_003410042.1	NAD(P)/FAD-dependent oxidoreductase	94.6	32.4	85.6
MGA_2541	LOCUS_25400	sequence1:2698382..2698960(+)	partial			WP_005112858.1	enoyl-CoA hydratase-related protein	91.7	67.3	55.1
MGA_2542	LOCUS_25410	sequence1:2699240..2700286(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2544	LOCUS_25430	sequence1:2700674..2702005(-)	partial			WP_010886125.1	PE domain-containing protein	73.4	37.3	31.8
MGA_2545	LOCUS_25440	sequence1:2702151..2702495(-)	internal_stop_codon	2702514..2702516(-)		WP_011728257.1	cupin domain-containing protein	95.6	31.3	78.9
MGA_2546	LOCUS_25450	sequence1:2702514..2703215(-)	internal_stop_codon	2702514..2702516(-)		WP_011728257.1	cupin domain-containing protein	99.1	66.4	75.8
MGA_2547	LOCUS_25460	sequence1:2703404..2704153(+)	internal_stop_codon	2704151..2704153(+)		WP_005079744.1	class I SAM-dependent methyltransferase	83.9	78.3	60.3
MGA_2550	LOCUS_25490	sequence1:2705894..2706355(-)	frameshift		2706393	WP_003403977.1	MFS transporter	64.7	20.7	46.4
MGA_2551	LOCUS_25500	sequence1:2706304..2707578(-)	frameshift		2706393	WP_003403977.1	MFS transporter	90.8	69.8	59.0
MGA_2555	LOCUS_25540	sequence1:2714285..2716363(+)	internal_stop_codon	2716361..2716363(+)		WP_010950392.1	LuxR family transcriptional regulator	98.8	63.1	54.7
MGA_2556	LOCUS_25550	sequence1:2716403..2717521(+)	internal_stop_codon	2716361..2716363(+)		WP_003401912.1	LuxR family transcriptional regulator	100.0	34.8	52.2
MGA_2564	LOCUS_25630	sequence1:2724453..2724767(+)	partial			WP_005089627.1	hypothetical protein	67.3	68.2	45.3
MGA_2566	LOCUS_25650	sequence1:2725496..2728078(-)	partial			WP_099318959.1	PE family protein	13.7	25.8	54.2
MGA_2570	LOCUS_25690	sequence1:2734864..2735397(+)	frameshift		2735385	WP_003401347.1	PPE family protein	91.0	29.0	64.0
MGA_2571	LOCUS_25700	sequence1:2735394..2736572(+)	frameshift		2735385	WP_003401347.1	PPE family protein	96.7	66.7	45.5
MGA_2574	LOCUS_25730	sequence1:2738045..2740009(-)	partial			WP_011730586.1	LpqN/LpqT family lipoprotein	52.3	56.5	55.4
MGA_2575	LOCUS_25740	sequence1:2740150..2741316(-)	partial			WP_223294576.1	DUF3179 domain-containing protein	71.9	80.2	23.2
MGA_2579	LOCUS_25780	sequence1:2743309..2743941(-)	internal_stop_codon	2743951..2743953(-)		WP_041322427.1	carboxylic acid reductase	99.5	18.1	69.3
MGA_2580	LOCUS_25790	sequence1:2743951..2746719(-)	internal_stop_codon	2743951..2743953(-)		WP_003413409.1	thioester reductase domain-containing protein	100.0	78.0	63.7
MGA_2582	LOCUS_25810	sequence1:2748011..2748448(+)	frameshift		2747903	WP_011815826.1	YcaO-like family protein	91.7	33.2	30.1
MGA_2584	LOCUS_25830	sequence1:2749140..2750900(-)	partial			WP_003899118.1	PecA family PE domain-processing aspartic protease	33.1	34.8	61.9
MGA_2593	LOCUS_25920	sequence1:2758384..2759484(+)	partial			WP_066877136.1	FAD-binding oxidoreductase	20.8	17.1	40.8
MGA_2600	LOCUS_25990	sequence1:2765416..2765730(+)	internal_stop_codon	2765728..2765730(+)		WP_011730055.1	DUF899 family protein	98.1	42.3	78.4
MGA_2601	LOCUS_26000	sequence1:2765743..2766111(+)	internal_stop_codon	2765728..2765730(+)		WP_012803748.1	DUF899 family protein	98.4	51.7	64.2
MGA_2603	LOCUS_26020	sequence1:2767295..2768017(-)	internal_stop_codon	2767295..2767297(-)		WP_005082717.1	DUF1906 domain-containing protein	90.4	79.6	62.2
MGA_2608	LOCUS_26070	sequence1:2774035..2775081(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2611	LOCUS_26100	sequence1:2776783..2777586(+)	frameshift		2776774	WP_011267273.1	NADP-dependent oxidoreductase	98.9	78.2	48.5
MGA_2612	LOCUS_26110	sequence1:2777655..2778008(+)	internal_stop_codon	2778006..2778008(+)		WP_005071913.1	glycoside hydrolase family 16 protein	100.0	42.2	63.2
MGA_2613	LOCUS_26120	sequence1:2778285..2778488(+)	internal_stop_codon	2778006..2778008(+)		WP_003896743.1	glycoside hydrolase family 16 protein	98.5	24.8	80.3
MGA_2615	LOCUS_26140	sequence1:2778953..2779222(+)	partial			WP_001040568.1	elongation factor Tu	95.5	22.3	50.0
MGA_2617	LOCUS_26160	sequence1:2779720..2780295(-)	frameshift		2780315	WP_003899661.1	PPE domain-containing protein	95.3	71.1	33.0
MGA_2618	LOCUS_26170	sequence1:2780217..2780939(-)	partial			WP_011727070.1	PPE family protein	70.4	32.3	49.1
MGA_2629	LOCUS_26280	sequence1:2790537..2791667(-)	internal_stop_codon	2791734..2791736(-)		WP_003904746.1	virulence factor Mce family protein	86.7	79.5	82.8
MGA_2630	LOCUS_26290	sequence1:2791817..2792293(-)	internal_stop_codon	2792318..2792320(-)		WP_003899104.1	virulence factor Mce family protein	100.0	46.2	83.5
MGA_2631	LOCUS_26300	sequence1:2792318..2792845(-)	internal_stop_codon	2792318..2792320(-)		WP_003899104.1	virulence factor Mce family protein	100.0	51.2	82.9
MGA_2638	LOCUS_26370	sequence1:2798298..2799533(+)	partial			WP_011726850.1	LuxR C-terminal-related transcriptional regulator	71.8	74.7	36.1
MGA_2651	LOCUS_26500	sequence1:2812997..2813596(+)	internal_stop_codon	2813594..2813596(+)		WP_003409707.1	enoyl-CoA hydratase	99.5	62.9	86.0
MGA_2652	LOCUS_26510	sequence1:2813603..2813947(+)	internal_stop_codon	2813594..2813596(+)		WP_003409707.1	enoyl-CoA hydratase	100.0	35.8	84.2
MGA_2653	LOCUS_26520	sequence1:2813965..2814423(+)	internal_stop_codon	2814421..2814423(+)		WP_003900438.1	acyl-CoA dehydrogenase	100.0	37.2	74.3
MGA_2654	LOCUS_26530	sequence1:2814427..2815194(+)	internal_stop_codon	2814421..2814423(+)		WP_003900438.1	acyl-CoA dehydrogenase	99.6	62.1	78.0
MGA_2657	LOCUS_26560	sequence1:2816891..2817973(-)	partial			WP_011106325.1	anaerobic sulfatase maturase	72.8	67.0	27.7
MGA_2658	LOCUS_26570	sequence1:2818017..2819063(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2659	LOCUS_26580	sequence1:2819281..2820153(-)	partial			WP_004083032.1	alpha-L-fucosidase	87.6	56.1	48.4
MGA_2663	LOCUS_26620	sequence1:2823223..2823651(+)	partial			WP_003111015.1	hypothetical protein	59.2	45.4	34.1
MGA_2664	LOCUS_26630	sequence1:2823664..2824221(+)	internal_stop_codon	2823649..2823651(+)		WP_011086660.1	antibiotic biosynthesis monooxygenase	80.0	44.3	32.3
MGA_2667	LOCUS_26660	sequence1:2826041..2827459(-)	partial			WP_003403397.1	arylsulfatase AtsD	100.0	60.5	47.1
MGA_2670	LOCUS_26690	sequence1:2828874..2830793(+)	partial			WP_003899979.1	bifunctional GNAT family N-acetyltransferase/aminoglycoside 3'-phosphotransferase/choline kinase family protein	56.3	76.6	61.5
MGA_2675	LOCUS_26740	sequence1:2837417..2838253(-)	internal_stop_codon	2838371..2838373(-)		WP_003900433.1	lipase LipD	98.9	61.7	83.3
MGA_2676	LOCUS_26750	sequence1:2838371..2838700(-)	internal_stop_codon	2838371..2838373(-)		WP_003900433.1	lipase LipD	100.0	24.7	88.2
MGA_2683	LOCUS_26820	sequence1:2844201..2845247(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2684	LOCUS_26830	sequence1:2845594..2846202(+)	partial			WP_003906700.1	PPE family protein	100.0	20.5	62.9
MGA_2694	LOCUS_26930	sequence1:2855529..2856770(+)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	46.0	37.8	52.3
MGA_2695	LOCUS_26940	sequence1:2857354..2858400(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	31.0
MGA_2697	LOCUS_26960	sequence1:2859335..2859673(+)	partial			WP_003900428.1	hypothetical protein	98.2	71.2	75.7
MGA_2699	LOCUS_26980	sequence1:2860495..2861541(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2706	LOCUS_27050	sequence1:2867666..2868160(+)	frameshift,internal_stop_codon	2867464..2867466(+)	2867640,2867550	WP_003905677.1	macro domain-containing protein	92.7	44.3	86.2
MGA_2714	LOCUS_27130	sequence1:2875111..2876022(-)	frameshift,internal_stop_codon	2875111..2875113(-)	2874972,2874966	WP_010950616.1	PE family protein	38.9	24.5	70.3
MGA_2731	LOCUS_27300	sequence1:2889616..2890029(+)	partial			WP_003409420.1	resuscitation-promoting factor RpfC	95.6	73.9	61.7
MGA_2737	LOCUS_27360	sequence1:2893868..2897542(-)	partial			WP_163682492.1	non-ribosomal peptide synthetase	98.4	22.2	52.3
MGA_2738	LOCUS_27370	sequence1:2897991..2899037(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2739	LOCUS_27380	sequence1:2899038..2899757(-)	partial			WP_163682492.1	non-ribosomal peptide synthetase	83.3	3.6	48.7
MGA_2745	LOCUS_27440	sequence1:2906068..2906244(+)	partial			WP_003895017.1	(2Fe-2S)-binding protein	79.3	66.7	67.4
MGA_2755	LOCUS_27540	sequence1:2913280..2914563(+)	internal_stop_codon	2914561..2914563(+)		WP_011729178.1	endopeptidase La	100.0	54.8	77.5
MGA_2756	LOCUS_27550	sequence1:2914594..2915622(+)	internal_stop_codon	2914561..2914563(+)		WP_011729178.1	endopeptidase La	95.6	41.7	79.3
MGA_2762	LOCUS_27610	sequence1:2920914..2921558(-)	internal_stop_codon	2921685..2921687(-)		WP_003900424.1	CoA transferase	93.5	24.9	67.0
MGA_2763	LOCUS_27620	sequence1:2921685..2922023(-)	frameshift,internal_stop_codon	2921685..2921687(-)	2922033	WP_003900424.1	CoA transferase	100.0	13.9	83.0
MGA_2764	LOCUS_27630	sequence1:2922028..2923404(-)	frameshift		2922054	WP_003900424.1	CoA transferase	97.4	56.0	79.6
MGA_2773	LOCUS_27720	sequence1:2930824..2931774(-)	partial			WP_003409337.1	adhesin Apa	58.5	56.9	80.5
MGA_2776	LOCUS_27750	sequence1:2933363..2934133(-)	frameshift		2934165	WP_010931811.1	sulfide:quinone reductase	98.8	52.2	54.5
MGA_2777	LOCUS_27760	sequence1:2934049..2934834(-)	frameshift		2934168	WP_010931811.1	sulfide:quinone reductase	88.5	47.6	50.6
MGA_2797	LOCUS_27960	sequence1:2953454..2955037(+)	internal_stop_codon	2955035..2955037(+)		WP_010886091.1	PE family protein	23.9	20.8	52.4
MGA_2802	LOCUS_28010	sequence1:2961898..2962944(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2806	LOCUS_28050	sequence1:2966400..2967446(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2807	LOCUS_28060	sequence1:2968064..2970658(-)	partial			WP_011727967.1	hypothetical protein	62.6	41.9	28.2
MGA_2828	LOCUS_28270	sequence1:2994012..2995022(-)	partial			WP_003411041.1	tRNA (adenine(58)-N(1))-methyltransferase TrmI	57.7	70.4	83.2
MGA_2832	LOCUS_28310	sequence1:2997255..2998301(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2833	LOCUS_28320	sequence1:2998335..2999543(+)	internal_stop_codon	2999541..2999543(+)		WP_003403977.1	MFS transporter	99.8	73.7	53.4
MGA_2841	LOCUS_28400	sequence1:3004475..3005254(-)	frameshift		3004651,3004627	WP_010886133.1	PE family protein	45.2	23.5	56.4
MGA_2843	LOCUS_28420	sequence1:3007098..3007223(-)	internal_stop_codon	3007421..3007423(-)		WP_003411056.1	methionine synthase	100.0	3.4	92.7
MGA_2848	LOCUS_28470	sequence1:3012304..3013350(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2855	LOCUS_28540	sequence1:3019420..3019722(-)	partial			WP_003411107.1	hypothetical protein	99.0	73.7	82.2
MGA_2862	LOCUS_28610	sequence1:3026035..3026292(-)	frameshift,internal_stop_codon	3026034..3026036(-)	3026336,3026012	WP_012296512.1	recombinase family protein	98.8	15.3	81.0
MGA_2863	LOCUS_28620	sequence1:3026940..3027140(-)	partial			WP_005110629.1	plasmid replication initiator protein	90.9	12.0	61.7
MGA_2864	LOCUS_28630	sequence1:3027293..3027472(-)	frameshift		3027549	WP_003414900.1	phthiotriol/phenolphthiotriol dimycocerosates methyltransferase	91.5	21.5	70.7
MGA_2866	LOCUS_28650	sequence1:3028119..3029165(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2869	LOCUS_28680	sequence1:3033142..3034188(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2870	LOCUS_28690	sequence1:3034185..3036596(-)	partial			WP_013226861.1	non-ribosomal peptide synthetase	97.8	12.2	39.9
MGA_2872	LOCUS_28710	sequence1:3038034..3038267(-)	frameshift		3038275,3038212,3038182,3038281,3038250,3038284	WP_013224965.1	non-ribosomal peptide synthetase	85.7	1.2	45.8
MGA_2873	LOCUS_28720	sequence1:3038240..3038728(-)	frameshift,internal_stop_codon	3038240..3038242(-)	3038883,3038275,3038281,3038283,3038284,3038233	WP_011028842.1	non-ribosomal peptide synthetase	95.7	2.1	48.4
MGA_2876	LOCUS_28750	sequence1:3040615..3041661(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2877	LOCUS_28760	sequence1:3042130..3042486(-)	frameshift		3042185,3042046,3042527	WP_121576702.1	IS3 family transposase	94.9	30.1	36.6
MGA_2896	LOCUS_28950	sequence1:3063638..3064588(-)	frameshift		3063850,3063853,3063823	WP_010950878.1	PE family protein	47.5	23.0	59.3
MGA_2898	LOCUS_28970	sequence1:3066911..3068014(-)	frameshift		3066916	WP_003899197.1	hypothetical protein	71.1	64.6	63.6
MGA_2909	LOCUS_29080	sequence1:3078676..3079722(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2910	LOCUS_29090	sequence1:3079998..3080528(-)	partial			WP_003900678.1	polyprenyl synthetase family protein	96.6	48.9	47.4
MGA_2912	LOCUS_29110	sequence1:3081757..3082608(-)	internal_stop_codon	3082684..3082686(-)		WP_010957686.1	hydroxymethylglutaryl-CoA reductase (NADPH)	99.6	78.7	58.2
MGA_2915	LOCUS_29140	sequence1:3084952..3085608(-)	internal_stop_codon	3085669..3085671(-)		WP_012774950.1	mevalonate kinase	88.5	61.1	37.8
MGA_2932	LOCUS_29310	sequence1:3101783..3102184(-)	frameshift		3102258	WP_003411371.1	hypothetical protein	97.0	51.0	71.0
MGA_2933	LOCUS_29320	sequence1:3102181..3102471(-)	frameshift		3102258	WP_003411371.1	hypothetical protein	74.0	27.6	70.4
MGA_2955	LOCUS_29540	sequence1:3125018..3125968(+)	frameshift		3125854	WP_003899218.1	hypothetical protein	88.6	55.1	70.9
MGA_2956	LOCUS_29550	sequence1:3125877..3126575(+)	frameshift,internal_stop_codon	3126574..3126576(+),3125817..3125819(+)	3126440,3126356,3125797	WP_003899218.1	hypothetical protein	99.6	43.2	53.2
MGA_2959	LOCUS_29580	sequence1:3128876..3129079(+)	frameshift		3129064	WP_003411442.1	adenylyl cyclase	86.6	15.3	81.0
MGA_2960	LOCUS_29590	sequence1:3129052..3130020(+)	frameshift		3129064	WP_003411442.1	adenylyl cyclase	99.1	84.4	75.2
MGA_2963	LOCUS_29620	sequence1:3134067..3135851(+)	partial			WP_011729702.1	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	54.5	55.4	79.7
MGA_2966	LOCUS_29650	sequence1:3138086..3139132(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2967	LOCUS_29660	sequence1:3139218..3141104(-)	partial			WP_003420809.1	PE family protein	56.4	73.0	38.8
MGA_2968	LOCUS_29670	sequence1:3141522..3142106(-)	frameshift		3141527	WP_010886125.1	PE domain-containing protein	99.5	19.0	42.1
MGA_2969	LOCUS_29680	sequence1:3142265..3143311(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_2970	LOCUS_29690	sequence1:3143591..3144406(-)	partial			WP_010886125.1	PE domain-containing protein	51.7	13.9	51.7
MGA_2971	LOCUS_29700	sequence1:3144700..3146616(-)	partial			WP_003420809.1	PE family protein	56.9	76.6	37.4
MGA_2986	LOCUS_29850	sequence1:3162591..3163376(+)	internal_stop_codon	3163374..3163376(+)		WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	98.9	43.3	68.7
MGA_2996	LOCUS_29950	sequence1:3175628..3176164(+)	partial			WP_010970164.1	DNA ligase D	83.7	17.3	48.0
MGA_3003	LOCUS_30020	sequence1:3184753..3185238(+)	frameshift		3185100	WP_003408035.1	adenylate cyclase	68.9	25.3	47.3
MGA_3004	LOCUS_30030	sequence1:3185142..3186098(+)	frameshift		3185100	WP_003408035.1	adenylate cyclase	99.7	71.1	76.3
MGA_3015	LOCUS_30140	sequence1:3198285..3198680(-)	partial			WP_003408004.1	TM2 domain-containing protein	76.3	68.5	86.0
MGA_3016	LOCUS_30150	sequence1:3198744..3200687(-)	partial			WP_003408002.1	prolipoprotein diacylglyceryl transferase	53.3	73.3	70.7
MGA_3024	LOCUS_30230	sequence1:3207827..3209341(+)	partial			WP_011727267.1	serine/threonine-protein kinase	60.3	61.5	61.3
MGA_3026	LOCUS_30250	sequence1:3211632..3212597(+)	frameshift		3212513	WP_003021315.1	cyanophycin synthetase	91.3	32.3	37.8
MGA_3027	LOCUS_30260	sequence1:3212516..3214366(+)	frameshift		3212513	WP_003021315.1	cyanophycin synthetase	92.7	60.9	58.7
MGA_3028	LOCUS_30270	sequence1:3214363..3215898(+)	partial			WP_010918464.1	cyanophycinase	35.6	42.5	35.3
MGA_3029	LOCUS_30280	sequence1:3215899..3216945(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	31.0
MGA_3048	LOCUS_30470	sequence1:3232497..3233195(-)	partial			WP_003914321.1	DUF2567 domain-containing protein	70.3	84.5	60.1
MGA_3051	LOCUS_30500	sequence1:3234637..3234888(-)	frameshift		3234890	WP_003407809.1	2'-5' RNA ligase family protein	95.2	46.7	81.0
MGA_3062	LOCUS_30610	sequence1:3249966..3250502(+)	partial			WP_003977465.1	pyridoxamine 5'-phosphate oxidase family protein	87.6	69.3	59.5
MGA_3071	LOCUS_30700	sequence1:3261432..3261755(-)	frameshift		3261801	WP_003407734.1	SDR family NAD(P)-dependent oxidoreductase	100.0	31.4	92.5
MGA_3072	LOCUS_30710	sequence1:3261775..3262449(-)	frameshift		3261801	WP_003407734.1	SDR family NAD(P)-dependent oxidoreductase	96.4	64.2	87.2
MGA_3073	LOCUS_30720	sequence1:3262688..3263017(+)	frameshift		3262939	WP_003407730.1	group 1 truncated hemoglobin GlbN	89.0	72.8	77.8
MGA_3075	LOCUS_30740	sequence1:3264245..3264883(+)	frameshift		3264237	WP_003898940.1	methyltransferase domain-containing protein	99.5	83.7	64.5
MGA_3077	LOCUS_30760	sequence1:3265817..3266350(-)	partial			WP_003407722.1	signal peptidase II	81.9	71.8	95.9
MGA_3081	LOCUS_30800	sequence1:3269511..3270032(+)	frameshift		3269981	WP_003420615.1	hypothetical protein	82.7	41.2	51.7
MGA_3082	LOCUS_30810	sequence1:3269981..3270562(+)	frameshift		3269981	WP_003420615.1	hypothetical protein	94.3	51.0	67.0
MGA_3087	LOCUS_30860	sequence1:3277512..3278558(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3093	LOCUS_30920	sequence1:3282491..3283033(-)	frameshift		3283080	WP_003407672.1	glycosyltransferase family 2 protein	87.8	66.7	65.5
MGA_3094	LOCUS_30930	sequence1:3283030..3283263(-)	frameshift		3283080	WP_003407672.1	glycosyltransferase family 2 protein	75.3	22.2	81.0
MGA_3098	LOCUS_30970	sequence1:3286521..3291518(+)	internal_stop_codon	3291516..3291518(+)		WP_010950554.1	type I polyketide synthase	100.0	79.7	64.5
MGA_3099	LOCUS_30980	sequence1:3291546..3292736(+)	internal_stop_codon	3291516..3291518(+)		WP_003913253.1	type I polyketide synthase	99.0	18.6	74.3
MGA_3100	LOCUS_30990	sequence1:3292790..3293446(+)	partial			WP_001087865.1	class I SAM-dependent methyltransferase	77.1	72.5	37.5
MGA_3108	LOCUS_31070	sequence1:3302234..3302923(+)	partial			WP_001977544.1	aldolase/citrate lyase family protein	68.1	56.9	28.2
MGA_3109	LOCUS_31080	sequence1:3303061..3303609(+)	internal_stop_codon	3303607..3303609(+)		WP_005420124.1	3-oxoacyl-ACP reductase FabG	91.2	76.6	34.8
MGA_3112	LOCUS_31110	sequence1:3306131..3306628(-)	frameshift		3306633	WP_003898905.1	glycosyltransferase 87 family protein	70.3	19.9	50.4
MGA_3113	LOCUS_31120	sequence1:3306625..3307686(-)	frameshift		3306633	WP_003898905.1	glycosyltransferase 87 family protein	99.2	59.1	52.7
MGA_3123	LOCUS_31220	sequence1:3314347..3315393(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3127	LOCUS_31260	sequence1:3318849..3319895(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	29.9
MGA_3128	LOCUS_31270	sequence1:3319892..3320104(-)	partial			WP_003898901.1	phytanoyl-CoA dioxygenase family protein	91.4	23.4	65.6
MGA_3132	LOCUS_31310	sequence1:3323531..3323938(-)	partial			WP_046463874.1	class I SAM-dependent methyltransferase	75.6	44.7	38.9
MGA_3138	LOCUS_31370	sequence1:3329341..3329520(-)	internal_stop_codon	3329539..3329541(-)		WP_003407599.1	serine hydrolase domain-containing protein	100.0	13.8	83.1
MGA_3139	LOCUS_31380	sequence1:3329539..3330504(-)	internal_stop_codon	3329539..3329541(-)		WP_003407599.1	serine hydrolase domain-containing protein	95.3	71.6	82.7
MGA_3144	LOCUS_31430	sequence1:3336944..3337918(+)	partial			WP_061481638.1	hypothetical protein	51.5	60.7	31.2
MGA_3145	LOCUS_31440	sequence1:3337923..3339443(-)	partial			WP_013225439.1	HAMP domain-containing sensor histidine kinase	65.6	72.6	46.2
MGA_3148	LOCUS_31470	sequence1:3341708..3342175(+)	partial			WP_011728059.1	nitroreductase family deazaflavin-dependent oxidoreductase	69.7	66.7	48.6
MGA_3170	LOCUS_31690	sequence1:3363906..3365003(+)	partial			WP_003407494.1	PE family protein	38.9	38.4	54.2
MGA_3172	LOCUS_31710	sequence1:3366950..3368455(-)	partial			WP_010886098.1	PecA family PE domain-processing aspartic protease	52.9	27.6	45.5
MGA_3188	LOCUS_31870	sequence1:3386648..3387694(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3190	LOCUS_31890	sequence1:3388925..3389971(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3195	LOCUS_31940	sequence1:3394799..3395497(+)	internal_stop_codon	3395495..3395497(+)		WP_003407443.1	glucose-6-phosphate dehydrogenase	100.0	44.6	87.5
MGA_3196	LOCUS_31950	sequence1:3395519..3396352(+)	internal_stop_codon	3395495..3395497(+)		WP_003407443.1	glucose-6-phosphate dehydrogenase	100.0	53.9	91.0
MGA_3200	LOCUS_31990	sequence1:3398597..3399946(+)	internal_stop_codon	3400019..3400021(+),3400112..3400114(+)		WP_010950544.1	PE family protein	30.3	28.3	60.4
MGA_3207	LOCUS_32060	sequence1:3404923..3405651(-)	partial			WP_004406597.1	GntR family transcriptional regulator	74.8	76.3	26.6
MGA_3208	LOCUS_32070	sequence1:3406218..3407264(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3214	LOCUS_32130	sequence1:3415036..3415713(+)	partial			WP_010950543.1	hypothetical protein	42.7	41.1	46.9
MGA_3251	LOCUS_32500	sequence1:3456549..3456866(-)	internal_stop_codon	3456921..3456923(-),3457026..3457028(-)		WP_003898857.1	integration host factor, actinobacterial type	100.0	55.3	85.7
MGA_3263	LOCUS_32620	sequence1:3470682..3470951(-)	frameshift		3470986	WP_003900326.1	cytochrome b5 domain-containing protein	100.0	18.2	80.9
MGA_3264	LOCUS_32630	sequence1:3470972..3472072(-)	frameshift		3470986	WP_003900326.1	cytochrome b5 domain-containing protein	100.0	75.1	82.3
MGA_3269	LOCUS_32680	sequence1:3476763..3478433(-)	frameshift		3478632,3478494	WP_003899363.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	100.0	59.1	84.5
MGA_3286	LOCUS_32850	sequence1:3493173..3493682(+)	frameshift		3493057,3493156	WP_003413213.1	hypothetical protein	100.0	71.6	82.8
MGA_3288	LOCUS_32870	sequence1:3495277..3496383(+)	partial			WP_003899377.1	DUF2189 domain-containing protein	67.1	80.6	60.3
MGA_3289	LOCUS_32880	sequence1:3496537..3496863(+)	internal_stop_codon	3496861..3496863(+)		WP_010886150.1	transglutaminase family protein	99.1	9.4	83.2
MGA_3295	LOCUS_32940	sequence1:3505148..3506011(-)	frameshift		3506012	WP_003899381.1	aromatic acid exporter family protein	99.0	80.0	48.6
MGA_3296	LOCUS_32950	sequence1:3506236..3506421(-)	frameshift,internal_stop_codon	3506236..3506238(-)	3506449	WP_003894385.1	nitroreductase family deazaflavin-dependent oxidoreductase	100.0	40.4	57.4
MGA_3297	LOCUS_32960	sequence1:3506414..3506662(-)	frameshift,internal_stop_codon	3506236..3506238(-)	3506449	WP_003894385.1	nitroreductase family deazaflavin-dependent oxidoreductase	79.3	43.0	64.6
MGA_3321	LOCUS_33200	sequence1:3535957..3536652(+)	frameshift,internal_stop_codon	3536058..3536060(+)	3536610,3536643,3536631,3536616,3536634,3536860,3536637	WP_010886165.1	PE family protein	51.5	7.7	52.1
MGA_3325	LOCUS_33240	sequence1:3539308..3541095(+)	partial			WP_010950748.1	PE family protein	25.5	27.7	61.2
MGA_3326	LOCUS_33250	sequence1:3541316..3542779(+)	partial			WP_010950748.1	PE family protein	31.2	27.7	60.5
MGA_3331	LOCUS_33300	sequence1:3545823..3546056(+)	partial			WP_003413444.1	DUF2617 family protein	97.4	43.9	72.0
MGA_3335	LOCUS_33340	sequence1:3548851..3549897(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3336	LOCUS_33350	sequence1:3549898..3551778(-)	partial			WP_003910308.1	PE family protein	19.8	21.4	62.1
MGA_3338	LOCUS_33370	sequence1:3554477..3555523(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_3339	LOCUS_33380	sequence1:3555799..3557475(-)	partial			WP_010886117.1	PE family protein	24.7	10.4	62.3
MGA_3340	LOCUS_33390	sequence1:3557544..3558590(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3341	LOCUS_33400	sequence1:3558929..3559138(+)	partial			WP_010908097.1	PucR family transcriptional regulator	92.8	15.2	57.8
MGA_3343	LOCUS_33420	sequence1:3560184..3561980(+)	partial			WP_010886177.1	PE family protein	21.4	21.9	51.6
MGA_3366	LOCUS_33650	sequence1:3581810..3582487(-)	partial			WP_013225629.1	hypothetical protein	40.9	75.2	34.4
MGA_3373	LOCUS_33720	sequence1:3590393..3592702(-)	partial			WP_009938544.1	PE family protein	15.3	15.2	62.7
MGA_3374	LOCUS_33730	sequence1:3593742..3594788(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	29.9
MGA_3375	LOCUS_33740	sequence1:3594840..3595301(+)	partial			WP_003899406.1	chloramphenicol phosphotransferase CPT family protein	98.0	66.7	82.7
MGA_3385	LOCUS_33840	sequence1:3601828..3602922(+)	frameshift		3602913	WP_010950755.1	ACR3 family arsenite efflux transporter	98.6	72.1	88.9
MGA_3386	LOCUS_33850	sequence1:3602919..3603224(+)	frameshift		3602913	WP_003413686.1	ACR3 family arsenite efflux transporter	72.3	14.7	82.2
MGA_3388	LOCUS_33870	sequence1:3603770..3604477(+)	frameshift		3603765	WP_011072192.1	ISAs1-like element ISSod22 family transposase	85.1	53.6	31.7
MGA_3389	LOCUS_33880	sequence1:3604527..3604715(+)	partial			WP_003413686.1	ACR3 family arsenite efflux transporter	80.6	10.0	84.0
MGA_3391	LOCUS_33900	sequence1:3606198..3608408(+)	partial			WP_010950544.1	PE family protein	16.6	24.8	63.1
MGA_3411	LOCUS_34100	sequence1:3627678..3628058(-)	frameshift,internal_stop_codon	3628117..3628119(-)	3628056	WP_003413891.1	1-deoxy-D-xylulose-5-phosphate synthase	98.4	19.6	80.8
MGA_3412	LOCUS_34110	sequence1:3628117..3628524(-)	frameshift,internal_stop_codon	3628117..3628119(-)	3628056	WP_003413891.1	1-deoxy-D-xylulose-5-phosphate synthase	100.0	21.2	88.1
MGA_3421	LOCUS_34190	sequence1:3638769..3639389(-)	internal_stop_codon	3639438..3639440(-)		WP_003413913.1	ABC transporter ATP-binding protein	100.0	68.4	80.6
MGA_3422	LOCUS_34200	sequence1:3639438..3639668(-)	internal_stop_codon	3639438..3639440(-)		WP_162139527.1	ABC transporter ATP-binding protein	88.2	22.7	74.6
MGA_3431	LOCUS_34290	sequence1:3647433..3647795(-)	partial			WP_003413930.1	dUTP diphosphatase	86.7	67.5	84.6
MGA_3438	LOCUS_34360	sequence1:3651568..3653073(+)	partial			WP_003413944.1	RNA polymerase sigma factor	71.1	67.6	94.7
MGA_3439	LOCUS_34370	sequence1:3653283..3655295(+)	partial			WP_004193152.1	T2SS-translocated chitinase	35.7	51.2	38.0
MGA_3450	LOCUS_34480	sequence1:3662741..3663562(-)	partial			WP_013223253.1	trypsin-like peptidase domain-containing protein	68.9	68.7	37.4
MGA_3459	LOCUS_34570	sequence1:3672033..3672491(+)	partial			WP_003413979.1	TerC/Alx family metal homeostasis membrane protein	95.4	37.5	75.8
MGA_3460	LOCUS_34580	sequence1:3672492..3673538(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3468	LOCUS_34660	sequence1:3680932..3681312(-)	frameshift		3681316	WP_010950765.1	DMT family transporter	98.4	41.5	69.6
MGA_3470	LOCUS_34680	sequence1:3682295..3684100(+)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	73.0	66.8	52.6
MGA_3476	LOCUS_34740	sequence1:3689666..3690313(+)	frameshift,internal_stop_codon	3690312..3690314(+)	3690019,3690389,3689926	WP_011027474.1	(2Fe-2S)-binding protein	99.1	81.8	36.0
MGA_3504	LOCUS_35020	sequence1:3718080..3718988(-)	internal_stop_codon	3718995..3718997(-)		WP_011086825.1	class I adenylate-forming enzyme family protein	97.7	55.3	38.0
MGA_3505	LOCUS_35030	sequence1:3719151..3720197(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3506	LOCUS_35040	sequence1:3720545..3721003(-)	partial			WP_011228677.1	long-chain fatty acid--CoA ligase	78.9	21.7	40.8
MGA_3512	LOCUS_35100	sequence1:3725862..3726041(-)	internal_stop_codon	3726075..3726077(-)		WP_011727153.1	dihydrodipicolinate reductase	98.3	16.2	84.5
MGA_3513	LOCUS_35110	sequence1:3726075..3726950(-)	internal_stop_codon	3726075..3726077(-)		WP_011727153.1	dihydrodipicolinate reductase	97.9	79.4	86.0
MGA_3520	LOCUS_35180	sequence1:3733129..3733578(-)	internal_stop_codon	3733654..3733656(-)		WP_003899476.1	Lrp/AsnC family transcriptional regulator	99.3	82.7	87.8
MGA_3537	LOCUS_35350	sequence1:3749599..3751011(-)	frameshift		3751160	WP_003414155.1	alpha/beta hydrolase family protein	99.8	83.5	79.5
MGA_3538	LOCUS_35360	sequence1:3751026..3751286(-)	frameshift		3751160	WP_003414155.1	alpha/beta hydrolase family protein	48.8	7.5	81.0
MGA_3547	LOCUS_35450	sequence1:3759649..3760653(-)	internal_stop_codon	3760726..3760728(-)		WP_010950602.1	type VII secretion system ESX-5 target PPE26	100.0	83.7	51.2
MGA_3550	LOCUS_35480	sequence1:3762202..3762882(+)	partial			WP_189232996.1	NAD(P)/FAD-dependent oxidoreductase	96.9	64.2	47.7
MGA_3552	LOCUS_35500	sequence1:3763987..3764256(-)	partial			WP_010950783.1	ABC transporter substrate-binding protein	94.4	19.3	73.8
MGA_3553	LOCUS_35510	sequence1:3764721..3765767(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3554	LOCUS_35520	sequence1:3765768..3766298(-)	frameshift		3766460,3766325	WP_003414501.1	ABC transporter substrate-binding protein	97.2	39.2	78.9
MGA_3560	LOCUS_35580	sequence1:3771359..3774187(-)	partial			WP_003899505.1	translation initiation factor IF-2	66.2	69.3	92.1
MGA_3575	LOCUS_35730	sequence1:3789505..3790737(-)	frameshift		3790794,3789542,3790854	WP_003406326.1	MFS transporter	97.1	68.4	55.0
MGA_3577	LOCUS_35750	sequence1:3791879..3792802(+)	frameshift		3792763,3792767	WP_010950405.1	siderophore RND transporter MmpL4	96.7	31.1	68.1
MGA_3578	LOCUS_35760	sequence1:3792883..3794817(+)	frameshift		3792770,3792763	WP_010950405.1	siderophore RND transporter MmpL4	95.5	63.7	75.5
MGA_3579	LOCUS_35770	sequence1:3795213..3796259(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3581	LOCUS_35790	sequence1:3797516..3798562(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3582	LOCUS_35800	sequence1:3798953..3799381(-)	partial			WP_003402304.1	hypothetical protein	55.6	81.4	53.2
MGA_3584	LOCUS_35820	sequence1:3800909..3801955(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3585	LOCUS_35830	sequence1:3802606..3803610(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	81.1	72.4	30.6
MGA_3594	LOCUS_35920	sequence1:3811053..3811259(-)	internal_stop_codon	3811053..3811055(-)		WP_003901197.1	MMPL family transporter	100.0	17.1	79.4
MGA_3595	LOCUS_35930	sequence1:3811576..3812622(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3596	LOCUS_35940	sequence1:3812588..3814360(-)	partial			WP_193485507.1	type I polyketide synthase	89.8	22.5	37.5
MGA_3602	LOCUS_36000	sequence1:3819543..3820589(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3605	LOCUS_36030	sequence1:3824938..3825162(+)	internal_stop_codon	3825160..3825162(+)		WP_003899026.1	PPE family protein	100.0	17.3	64.9
MGA_3606	LOCUS_36040	sequence1:3825163..3826194(+)	internal_stop_codon	3825160..3825162(+)		WP_003409179.1	PPE family protein	94.5	75.7	37.4
MGA_3610	LOCUS_36080	sequence1:3829205..3829993(+)	partial			WP_010950503.1	PPE family protein	92.0	69.2	26.3
MGA_3611	LOCUS_36090	sequence1:3830062..3830817(-)	partial			WP_003900586.1	gamma-glutamyl-gamma-aminobutyrate hydrolase	91.6	74.7	75.2
MGA_3622	LOCUS_36200	sequence1:3842565..3842819(+)	partial			WP_003899522.1	DUF2631 domain-containing protein	81.0	69.2	73.6
MGA_3631	LOCUS_36290	sequence1:3850884..3851930(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3633	LOCUS_36310	sequence1:3853120..3854235(+)	internal_stop_codon	3854233..3854235(+)		WP_010938554.1	glutamine synthetase III	100.0	51.2	64.2
MGA_3634	LOCUS_36320	sequence1:3854251..3855297(+)	internal_stop_codon	3854233..3854235(+)		WP_010938554.1	glutamine synthetase III	99.7	47.8	58.3
MGA_3635	LOCUS_36330	sequence1:3855566..3856846(-)	partial			WP_003412039.1	PE family protein	47.2	48.9	38.7
MGA_3639	LOCUS_36370	sequence1:3859945..3860733(-)	frameshift		3860864	WP_005081393.1	APC family permease	98.1	45.7	57.5
MGA_3640	LOCUS_36380	sequence1:3860673..3861662(-)	frameshift		3860864	WP_005081393.1	APC family permease	79.9	46.6	72.2
MGA_3642	LOCUS_36400	sequence1:3863310..3864086(-)	frameshift		3864154	WP_014877153.1	gamma-aminobutyraldehyde dehydrogenase	99.6	51.9	79.8
MGA_3643	LOCUS_36410	sequence1:3864086..3864787(-)	frameshift		3864154	WP_014877153.1	gamma-aminobutyraldehyde dehydrogenase	90.1	42.4	71.0
MGA_3654	LOCUS_36520	sequence1:3875342..3876442(+)	partial			WP_003417421.1	PDZ-interacting protease regulator Ppr1	66.9	77.2	38.0
MGA_3655	LOCUS_36530	sequence1:3876423..3876698(-)	partial			WP_003419334.1	PPE family protein	96.7	15.2	52.3
MGA_3656	LOCUS_36540	sequence1:3876937..3879684(+)	partial			WP_010950570.1	PE domain-containing protein	33.7	30.1	52.1
MGA_3658	LOCUS_36560	sequence1:3880237..3881034(+)	internal_stop_codon	3880228..3880230(+)		WP_003899159.1	hypothetical protein	50.9	41.8	45.9
MGA_3660	LOCUS_36580	sequence1:3882409..3882606(+)	partial			WP_003408840.1	effector	98.5	68.1	84.4
MGA_3661	LOCUS_36590	sequence1:3882843..3883943(+)	frameshift,internal_stop_codon	3883941..3883943(+)	3884057	WP_010886173.1	PE family protein	41.5	19.7	38.8
MGA_3664	LOCUS_36620	sequence1:3886403..3886831(+)	frameshift		3886957	WP_005110336.1	site-specific integrase	81.7	29.8	68.1
MGA_3666	LOCUS_36640	sequence1:3889181..3890227(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3669	LOCUS_36670	sequence1:3892254..3894032(+)	frameshift		3893621	WP_048061075.1	cation-transporting P-type ATPase	80.6	56.1	35.7
MGA_3670	LOCUS_36680	sequence1:3893992..3894852(+)	partial			WP_013227286.1	cation-transporting P-type ATPase	91.3	30.0	45.2
MGA_3672	LOCUS_36700	sequence1:3895325..3895972(-)	partial			WP_066567687.1	hypothetical protein	43.7	48.8	37.5
MGA_3682	LOCUS_36800	sequence1:3906584..3907309(-)	frameshift,internal_stop_codon	3907501..3907503(-)	3907347	WP_003411960.1	dimethylarginine dimethylaminohydrolase family protein	100.0	79.8	78.4
MGA_3687	LOCUS_36850	sequence1:3911722..3914211(+)	partial			WP_003408545.1	ATP transporter ATP-binding protein/permease	64.2	61.8	45.8
MGA_3692	LOCUS_36900	sequence1:3920538..3927413(+)	frameshift		3927200,3926307,3926980,3925286,3927014,3925244,3927197,3926271	WP_169347939.1	non-ribosomal peptide synthase/polyketide synthase	45.0	15.7	38.1
MGA_3693	LOCUS_36910	sequence1:3927331..3930045(+)	frameshift		3927200	WP_003113143.1	non-ribosomal peptide synthetase	85.7	31.0	34.2
MGA_3694	LOCUS_36920	sequence1:3930065..3930577(+)	partial			WP_010974487.1	flavin reductase	80.6	41.8	38.7
MGA_3695	LOCUS_36930	sequence1:3930853..3931899(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3697	LOCUS_36950	sequence1:3932844..3933890(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3698	LOCUS_36960	sequence1:3934611..3935030(-)	frameshift		3935125,3934615	WP_003411973.1	nitrate/nitrite transporter	99.3	26.0	64.5
MGA_3699	LOCUS_36970	sequence1:3935105..3936133(-)	frameshift		3935125	WP_003411973.1	nitrate/nitrite transporter	98.5	65.0	71.5
MGA_3703	LOCUS_37010	sequence1:3942042..3943433(+)	frameshift		3943310	WP_011730196.1	adenylate/guanylate cyclase domain-containing protein	79.5	68.8	50.5
MGA_3704	LOCUS_37020	sequence1:3944643..3945101(+)	frameshift		3945020	WP_003401488.1	type VII secretion system ESX-3 target PPE4	82.9	24.8	63.8
MGA_3705	LOCUS_37030	sequence1:3945098..3946003(+)	frameshift		3945020	WP_003899661.1	PPE domain-containing protein	95.3	78.7	29.0
MGA_3706	LOCUS_37040	sequence1:3946318..3946974(-)	partial			WP_003906797.1	multidrug resistance protein Stp	91.7	37.2	84.5
MGA_3707	LOCUS_37050	sequence1:3947302..3948348(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3708	LOCUS_37060	sequence1:3948314..3948748(-)	partial			WP_003906797.1	multidrug resistance protein Stp	93.1	25.0	82.1
MGA_3718	LOCUS_37160	sequence1:3958133..3958384(+)	internal_stop_codon	3958382..3958384(+)		WP_003899282.1	TPM domain-containing protein	100.0	12.6	66.3
MGA_3719	LOCUS_37170	sequence1:3958391..3960121(+)	internal_stop_codon	3958382..3958384(+)		WP_003899282.1	TPM domain-containing protein	94.1	81.8	66.1
MGA_3723	LOCUS_37210	sequence1:3961453..3962499(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3724	LOCUS_37220	sequence1:3962868..3963566(+)	frameshift		3963416	WP_003899284.1	phospholipase C	90.5	41.7	77.4
MGA_3725	LOCUS_37230	sequence1:3963482..3963844(+)	frameshift		3963416	WP_003899284.1	phospholipase C	100.0	23.6	80.8
MGA_3726	LOCUS_37240	sequence1:3964152..3965198(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3727	LOCUS_37250	sequence1:3965478..3966590(-)	partial			WP_010950703.1	PPE family protein	77.0	41.9	44.4
MGA_3736	LOCUS_37340	sequence1:3973783..3973989(-)	partial			WP_003412226.1	hypothetical protein	64.7	43.4	61.2
MGA_3753	LOCUS_37510	sequence1:3998681..3999247(+)	partial			WP_003973221.1	GNAT family N-acetyltransferase	90.4	74.0	48.0
MGA_3767	LOCUS_37650	sequence1:4014416..4014907(-)	frameshift,internal_stop_codon	4014416..4014418(-)	4014917	WP_003400655.1	dormancy-associated translation inhibitor	98.8	59.0	67.1
MGA_3790	LOCUS_37880	sequence1:4041325..4042920(+)	partial			WP_003911027.1	PE family protein	23.0	27.8	59.8
MGA_3791	LOCUS_37890	sequence1:4043024..4044451(+)	partial			WP_003911027.1	PE family protein	30.1	31.9	47.6
MGA_3792	LOCUS_37900	sequence1:4044456..4044920(-)	frameshift		4044957	WP_003412357.1	transglutaminase family protein	100.0	55.2	84.4
MGA_3797	LOCUS_37950	sequence1:4049410..4050060(-)	frameshift		4050184	WP_003412371.1	ComEC/Rec2 family competence protein	100.0	42.0	60.2
MGA_3798	LOCUS_37960	sequence1:4049948..4050985(-)	frameshift		4050184	WP_003412371.1	ComEC/Rec2 family competence protein	76.2	50.6	64.3
MGA_3820	LOCUS_38180	sequence1:4076322..4077623(-)	frameshift		4077622	WP_003412557.1	adenylate/guanylate cyclase domain-containing protein	100.0	59.3	79.7
MGA_3821	LOCUS_38190	sequence1:4077581..4078516(-)	frameshift		4077625	WP_003412557.1	adenylate/guanylate cyclase domain-containing protein	95.8	40.8	73.2
MGA_3822	LOCUS_38200	sequence1:4078709..4079755(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3823	LOCUS_38210	sequence1:4080610..4082709(+)	partial			WP_010950464.1	PE family protein	17.2	19.7	45.0
MGA_3848	LOCUS_38460	sequence1:4108613..4109344(-)	partial			WP_003412613.1	resuscitation-promoting factor protein RpfE	33.7	47.7	82.9
MGA_3849	LOCUS_38470	sequence1:4110002..4111048(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_3866	LOCUS_38640	sequence1:4129930..4131621(-)	partial			WP_099318959.1	PE family protein	20.6	25.5	46.2
MGA_3872	LOCUS_38700	sequence1:4138718..4139887(+)	frameshift		4138571	WP_003899285.1	phospholipase C	100.0	76.0	78.9
MGA_3873	LOCUS_38710	sequence1:4139915..4141654(-)	partial			WP_000615086.1	alpha/beta fold hydrolase	97.6	49.9	31.4
MGA_3874	LOCUS_38720	sequence1:4141738..4142685(-)	internal_stop_codon	4141738..4141740(-),4142728..4142730(-)		WP_011730278.1	MFS transporter	98.1	54.2	51.3
MGA_3875	LOCUS_38730	sequence1:4142728..4143273(-)	internal_stop_codon	4142728..4142730(-)		WP_011730278.1	MFS transporter	86.7	27.6	69.4
MGA_3882	LOCUS_38800	sequence1:4153173..4153697(-)	partial			WP_003412710.1	single-stranded DNA-binding protein	72.4	78.3	87.3
MGA_3885	LOCUS_38830	sequence1:4155292..4156356(-)	internal_stop_codon	4156477..4156479(-)		WP_010950725.1	glycerol-3-phosphate 1-O-acyltransferase	98.3	44.1	82.5
MGA_3886	LOCUS_38840	sequence1:4156477..4157658(-)	internal_stop_codon	4156477..4156479(-)		WP_003917012.1	glycerol-3-phosphate 1-O-acyltransferase	100.0	50.3	83.9
MGA_3890	LOCUS_38880	sequence1:4163051..4163587(+)	frameshift		4163545	WP_003409976.1	cutinase Cfp21	92.1	70.0	50.6
MGA_3892	LOCUS_38900	sequence1:4166711..4167757(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3893	LOCUS_38910	sequence1:4168116..4168367(+)	partial			WP_003899794.1	hypothetical protein	57.8	42.9	87.5
MGA_3897	LOCUS_38950	sequence1:4171842..4172693(-)	internal_stop_codon	4171842..4171844(-)		WP_003412761.1	pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha	100.0	77.1	81.6
MGA_3898	LOCUS_38960	sequence1:4173041..4174087(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3914	LOCUS_39120	sequence1:4191278..4191877(-)	partial			WP_013226070.1	TetR/AcrR family transcriptional regulator	42.2	40.0	45.2
MGA_3928	LOCUS_39260	sequence1:4205883..4206212(+)	frameshift,internal_stop_codon	4206210..4206212(+)	4206269	WP_011730378.1	DUF3556 domain-containing protein	100.0	18.7	65.1
MGA_3929	LOCUS_39270	sequence1:4206284..4207621(+)	frameshift,internal_stop_codon	4206210..4206212(+)	4206272	WP_010950497.1	DUF3556 domain-containing protein	98.7	76.7	62.1
MGA_3930	LOCUS_39280	sequence1:4207733..4207960(-)	partial			WP_003412942.1	DUF3618 domain-containing protein	68.0	68.0	72.5
MGA_3935	LOCUS_39330	sequence1:4211767..4212639(+)	internal_stop_codon	4212637..4212639(+)		WP_011728918.1	DUF2339 domain-containing protein	63.1	27.6	44.3
MGA_3936	LOCUS_39340	sequence1:4212691..4213674(+)	frameshift,internal_stop_codon	4212637..4212639(+),4213672..4213674(+)	4213683	WP_011728918.1	DUF2339 domain-containing protein	100.0	53.7	39.6
MGA_3940	LOCUS_39380	sequence1:4224859..4226001(+)	partial			WP_010926041.1	aromatic ring-hydroxylating dioxygenase subunit alpha	57.1	54.0	29.0
MGA_3943	LOCUS_39410	sequence1:4227903..4228949(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_3948	LOCUS_39460	sequence1:4232344..4232550(+)	internal_stop_codon	4232548..4232550(+)		WP_011729162.1	MDR family MFS transporter	67.6	6.7	69.6
MGA_3949	LOCUS_39470	sequence1:4232551..4234032(+)	internal_stop_codon	4232548..4232550(+)		WP_011729162.1	MDR family MFS transporter	93.1	66.6	64.8
MGA_3955	LOCUS_39530	sequence1:4241864..4242199(+)	partial			WP_011730278.1	MFS transporter	68.5	13.4	64.5
MGA_3956	LOCUS_39540	sequence1:4242165..4243211(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_3957	LOCUS_39550	sequence1:4243597..4244271(+)	internal_stop_codon	4244269..4244271(+)		WP_003406326.1	MFS transporter	100.0	38.7	54.0
MGA_3958	LOCUS_39560	sequence1:4244284..4244739(+)	internal_stop_codon	4244269..4244271(+)		WP_003898791.1	MFS transporter	100.0	25.7	51.7
MGA_3959	LOCUS_39570	sequence1:4244862..4245104(-)	partial			WP_011728745.1	LLM class flavin-dependent oxidoreductase	91.2	25.7	67.1
MGA_3962	LOCUS_39600	sequence1:4246639..4247088(-)	partial			WP_011728745.1	LLM class flavin-dependent oxidoreductase	94.6	50.0	69.0
MGA_3964	LOCUS_39620	sequence1:4248224..4249210(+)	frameshift,internal_stop_codon	4249209..4249211(+)	4249012,4249046	WP_011730097.1	acyl-CoA dehydrogenase family protein	87.8	73.9	41.0
MGA_3975	LOCUS_39730	sequence1:4259316..4260191(+)	internal_stop_codon	4260189..4260191(+),4260306..4260308(+)		WP_011728227.1	class I adenylate-forming enzyme family protein	99.0	55.6	55.6
MGA_3976	LOCUS_39740	sequence1:4260321..4260842(+)	internal_stop_codon	4260189..4260191(+),4260306..4260308(+)		WP_011728227.1	class I adenylate-forming enzyme family protein	98.3	33.6	61.2
MGA_3980	LOCUS_39780	sequence1:4263642..4264586(-)	frameshift		4264675	WP_011728360.1	CoA transferase	98.4	75.4	60.3
MGA_3984	LOCUS_39820	sequence1:4268124..4268855(-)	frameshift		4268886	WP_003895326.1	phosphotransferase	99.2	67.9	66.0
MGA_3993	LOCUS_39910	sequence1:4278732..4279463(+)	partial			WP_235624115.1	hypothetical protein	67.1	81.2	55.4
MGA_3994	LOCUS_39920	sequence1:4279730..4280221(-)	frameshift		4280231	WP_042510635.1	pyruvate dehydrogenase	99.4	20.8	73.5
MGA_3995	LOCUS_39930	sequence1:4280190..4282055(-)	frameshift		4280231	WP_042510635.1	pyruvate dehydrogenase	97.4	75.4	81.5
MGA_3997	LOCUS_39950	sequence1:4283049..4283549(+)	internal_stop_codon	4283547..4283549(+)		WP_003899112.1	CAP domain-containing protein	85.5	64.3	74.6
MGA_4054	LOCUS_40520	sequence1:4350785..4351303(-)	partial			WP_010886117.1	PE family protein	68.6	8.6	44.9
MGA_4057	LOCUS_40550	sequence1:4354927..4355286(-)	partial			WP_011123284.1	YciI family protein	84.0	45.5	43.6
MGA_4063	LOCUS_40610	sequence1:4360460..4361758(+)	partial			WP_164929952.1	DMT family transporter	66.7	80.8	44.8
MGA_4064	LOCUS_40620	sequence1:4361643..4362290(+)	partial			WP_003642345.1	TMEM175 family protein	45.1	50.5	35.1
MGA_4071	LOCUS_40690	sequence1:4368549..4370294(+)	partial			WP_011144393.1	potassium channel protein	88.5	74.9	26.6
MGA_4072	LOCUS_40700	sequence1:4370303..4371706(-)	partial			WP_010886177.1	PE family protein	26.1	20.9	57.4
MGA_4073	LOCUS_40710	sequence1:4371804..4371968(-)	internal_stop_codon	4371993..4371995(-)		WP_003896372.1	LLM class flavin-dependent oxidoreductase	94.4	17.4	60.8
MGA_4074	LOCUS_40720	sequence1:4371993..4372676(-)	internal_stop_codon	4371993..4371995(-)		WP_003896372.1	LLM class flavin-dependent oxidoreductase	100.0	77.5	73.6
MGA_4097	LOCUS_40950	sequence1:4396979..4398265(-)	frameshift		4397020,4397014	WP_010886133.1	PE family protein	30.1	25.9	61.2
MGA_4098	LOCUS_40960	sequence1:4398986..4399318(+)	partial			WP_003406566.1	DUF732 domain-containing protein	71.8	69.9	73.4
MGA_4104	LOCUS_41020	sequence1:4404018..4405808(+)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	69.6	66.1	76.6
MGA_4109	LOCUS_41070	sequence1:4409925..4410389(+)	frameshift		4410320	WP_003902894.1	acyl-CoA dehydrogenase family protein	81.2	32.2	85.6
MGA_4110	LOCUS_41080	sequence1:4410362..4411099(+)	frameshift		4410323	WP_003902894.1	acyl-CoA dehydrogenase family protein	100.0	63.9	81.9
MGA_4116	LOCUS_41140	sequence1:4415293..4416339(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4120	LOCUS_41180	sequence1:4419098..4420951(+)	partial			WP_010886110.1	serine/threonine protein kinase PknH	70.7	67.9	63.4
MGA_4121	LOCUS_41190	sequence1:4420997..4423264(+)	frameshift,internal_stop_codon	4423259..4423261(+)	4423192	WP_030872986.1	FHA domain-containing protein	83.8	74.1	44.1
MGA_4122	LOCUS_41200	sequence1:4423797..4425800(+)	partial			WP_010886110.1	serine/threonine protein kinase PknH	44.4	47.3	86.8
MGA_4126	LOCUS_41240	sequence1:4429479..4430012(+)	partial			WP_011730074.1	hypothetical protein	70.1	62.0	42.7
MGA_4137	LOCUS_41350	sequence1:4440768..4442810(+)	partial			WP_010886105.1	PE family protein	22.4	21.9	55.9
MGA_4139	LOCUS_41370	sequence1:4443449..4444222(+)	partial			WP_003900088.1	PPE family protein	69.6	30.2	50.3
MGA_4162	LOCUS_41600	sequence1:4472736..4473404(+)	partial			WP_003406288.1	DUF4190 domain-containing protein	37.4	41.9	68.7
MGA_4169	LOCUS_41670	sequence1:4480167..4480571(-)	partial			WP_003406258.1	anti-sigma E factor RseA	84.3	73.4	84.1
MGA_4177	LOCUS_41750	sequence1:4488968..4490779(+)	partial			WP_010950464.1	PE family protein	20.2	19.4	63.9
MGA_4178	LOCUS_41760	sequence1:4491024..4492736(+)	partial			WP_010886177.1	PE family protein	21.4	20.9	53.3
MGA_4181	LOCUS_41790	sequence1:4495147..4495440(+)	frameshift		4495118	WP_003898773.1	glycogen synthase	99.0	24.8	86.5
MGA_4194	LOCUS_41920	sequence1:4506653..4507699(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4204	LOCUS_42020	sequence1:4519364..4519912(+)	frameshift		4519903	WP_013224382.1	OB-fold domain-containing protein	87.4	50.3	47.8
MGA_4205	LOCUS_42030	sequence1:4519912..4520340(+)	frameshift		4519903	WP_013224382.1	OB-fold domain-containing protein	76.1	35.4	49.5
MGA_4207	LOCUS_42050	sequence1:4520789..4521232(+)	internal_stop_codon	4521230..4521232(+)		WP_003419287.1	lipid-transfer protein	97.3	38.1	55.8
MGA_4208	LOCUS_42060	sequence1:4521257..4521958(+)	internal_stop_codon	4521230..4521232(+)		WP_013224384.1	lipid-transfer protein	97.0	57.8	64.6
MGA_4215	LOCUS_42130	sequence1:4529983..4531029(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4230	LOCUS_42280	sequence1:4548232..4548750(+)	frameshift		4548690	WP_003976304.1	MFS transporter	93.6	33.5	42.0
MGA_4231	LOCUS_42290	sequence1:4548744..4549787(+)	frameshift		4548687	WP_011030563.1	MFS transporter	97.7	64.4	36.2
MGA_4243	LOCUS_42410	sequence1:4562889..4563935(-)	partial			WP_003418011.1	anti-sigma D factor RsdA	67.0	75.9	65.2
MGA_4248	LOCUS_42460	sequence1:4568350..4569345(+)	frameshift,internal_stop_codon	4569343..4569345(+)	4569204,4569358	WP_003419334.1	PPE family protein	63.1	38.2	51.2
MGA_4249	LOCUS_42470	sequence1:4569472..4569810(+)	internal_stop_codon	4569343..4569345(+)		WP_003419334.1	PPE family protein	60.7	12.3	57.4
MGA_4250	LOCUS_42480	sequence1:4569986..4570822(-)	internal_stop_codon	4569986..4569988(-)		WP_011072192.1	ISAs1-like element ISSod22 family transposase	84.9	63.0	29.3
MGA_4251	LOCUS_42490	sequence1:4571229..4571420(+)	partial			WP_003419334.1	PPE family protein	96.8	10.5	50.8
MGA_4253	LOCUS_42510	sequence1:4572173..4572784(+)	frameshift		4572586,4572604	WP_003900088.1	PPE family protein	69.0	23.9	50.7
MGA_4254	LOCUS_42520	sequence1:4572781..4573683(+)	frameshift		4572640,4572595,4572628	WP_003419334.1	PPE family protein	88.0	44.0	43.8
MGA_4281	LOCUS_42790	sequence1:4598515..4601307(-)	frameshift		4601315	WP_003912232.1	type VII secretion system ESX-4 FtsK/SpoIIIE family ATPase EccC4	99.6	75.1	63.7
MGA_4282	LOCUS_42800	sequence1:4601217..4602194(-)	frameshift		4601315	WP_010950889.1	type VII secretion system ESX-4 FtsK/SpoIIIE family ATPase EccC4	90.5	23.9	54.6
MGA_4288	LOCUS_42860	sequence1:4608362..4609816(+)	internal_stop_codon	4609814..4609816(+)		WP_010950891.1	allantoin permease	98.1	84.5	83.2
MGA_4289	LOCUS_42870	sequence1:4610149..4610922(+)	internal_stop_codon	4610920..4610922(+)		WP_003414680.1	PPE family protein	80.5	51.2	51.7
MGA_4291	LOCUS_42890	sequence1:4611416..4612417(+)	frameshift		4612372	WP_003408416.1	PPE family protein	97.3	84.7	45.4
MGA_4328	LOCUS_43260	sequence1:4646011..4646976(-)	internal_stop_codon	4647022..4647024(-)		WP_003898564.1	signal peptide peptidase SppA	99.7	51.4	79.4
MGA_4329	LOCUS_43270	sequence1:4647022..4647813(-)	internal_stop_codon	4647022..4647024(-)		WP_003898564.1	signal peptide peptidase SppA	100.0	41.6	77.6
MGA_4345	LOCUS_43430	sequence1:4658239..4658376(-)	internal_stop_codon	4658239..4658241(-)		WP_011727677.1	sulfatase-like hydrolase/transferase	84.4	4.9	76.3
MGA_4361	LOCUS_43590	sequence1:4667988..4669034(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_4364	LOCUS_43620	sequence1:4672766..4674247(+)	internal_stop_codon	4674245..4674247(+)		WP_003901256.1	PPE family protein	99.6	75.0	68.8
MGA_4365	LOCUS_43630	sequence1:4674248..4674751(+)	internal_stop_codon	4674245..4674247(+)		WP_010950605.1	PPE family protein	97.6	24.3	61.3
MGA_4369	LOCUS_43670	sequence1:4678365..4678928(-)	partial			WP_003403497.1	mycofactocin biosynthesis peptidyl-dipeptidase MftE	95.7	71.3	77.1
MGA_4376	LOCUS_43740	sequence1:4685161..4685790(-)	frameshift,internal_stop_codon	4685803..4685805(-)	4685926	WP_003403468.1	Rv0687 family mycofactocin-dependent SDR oxidoreductase	100.0	76.0	80.9
MGA_4394	LOCUS_43920	sequence1:4703729..4704661(-)	partial			WP_200823401.1	alpha/beta hydrolase	72.3	75.7	30.8
MGA_4407	LOCUS_44050	sequence1:4722362..4723345(+)	internal_stop_codon	4723343..4723345(+),4723388..4723390(+)		WP_000268883.1	prophage tail fiber N-terminal domain-containing protein	83.8	27.8	21.9
MGA_4432	LOCUS_44300	sequence1:4747339..4747983(+)	internal_stop_codon	4747300..4747302(+),4747981..4747983(+)		WP_003403262.1	hypothetical protein	100.0	76.7	82.2
MGA_4448	LOCUS_44460	sequence1:4771898..4772155(-)	internal_stop_codon	4772165..4772167(-)		WP_003898511.1	Mut7-C RNAse domain-containing protein	92.9	31.3	64.6
MGA_4449	LOCUS_44470	sequence1:4772165..4772671(-)	internal_stop_codon	4772165..4772167(-)		WP_003898511.1	Mut7-C RNAse domain-containing protein	99.4	66.3	80.2
MGA_4452	LOCUS_44500	sequence1:4776199..4778970(+)	frameshift		4779200,4779202,4779211,4778769,4778772,4779227,4778782,4778722,4778787,4778790,4778791,4778793,4778350,4779184,4778802,4779193,4779196,4779197,4779199	WP_010950415.1	PE family protein	12.8	9.0	55.9
MGA_4454	LOCUS_44520	sequence1:4780353..4781375(-)	partial			WP_003900174.1	TIGR03086 family metal-binding protein	95.3	74.7	72.2
MGA_4460	LOCUS_44580	sequence1:4788085..4788699(-)	internal_stop_codon	4788748..4788750(-)		WP_003898561.1	arylsulfatase AtsA	99.0	25.9	51.5
MGA_4461	LOCUS_44590	sequence1:4788748..4790400(-)	internal_stop_codon	4788748..4788750(-)		WP_011727677.1	sulfatase-like hydrolase/transferase	99.8	70.1	63.0
MGA_4465	LOCUS_44630	sequence1:4792917..4794641(-)	partial			WP_003906700.1	PPE family protein	99.1	62.3	51.5
MGA_4466	LOCUS_44640	sequence1:4794690..4795736(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4469	LOCUS_44670	sequence1:4798442..4798705(+)	internal_stop_codon	4798703..4798705(+)		WP_013227534.1	TetR/AcrR family transcriptional regulator	79.3	37.5	46.4
MGA_4470	LOCUS_44680	sequence1:4798706..4799047(+)	internal_stop_codon	4798703..4798705(+)		WP_013227534.1	TetR/AcrR family transcriptional regulator	87.6	50.5	42.4
MGA_4472	LOCUS_44700	sequence1:4799772..4801496(+)	partial			WP_013399334.1	ABC transporter permease	38.5	24.1	22.0
MGA_4476	LOCUS_44740	sequence1:4803629..4806526(+)	partial			WP_000875575.1	type 2 lanthipeptide synthetase LanM	47.2	44.1	24.6
MGA_4482	LOCUS_44800	sequence1:4813786..4815075(+)	frameshift		4814814	WP_010908805.1	SulP family inorganic anion transporter	80.0	69.4	70.1
MGA_4483	LOCUS_44810	sequence1:4814957..4815268(+)	frameshift		4814814	WP_010908805.1	SulP family inorganic anion transporter	100.0	21.2	60.0
MGA_4500	LOCUS_44980	sequence1:4832084..4832785(+)	partial			WP_010908794.1	hypothetical protein	65.7	73.9	56.2
MGA_4505	LOCUS_45030	sequence1:4835782..4836441(+)	internal_stop_codon	4836439..4836441(+)		WP_003402904.1	inorganic phosphate transporter	100.0	52.5	83.1
MGA_4506	LOCUS_45040	sequence1:4836442..4837059(+)	frameshift,internal_stop_codon	4836439..4836441(+)	4837023	WP_003911224.1	inorganic phosphate transporter	94.6	45.6	72.2
MGA_4513	LOCUS_45110	sequence1:4841594..4843411(-)	partial			WP_003900169.1	hypothetical protein	69.6	74.5	57.1
MGA_4528	LOCUS_45260	sequence1:4857266..4858135(-)	frameshift,internal_stop_codon	4858410..4858412(-)	4858400,4858133	WP_003113879.1	APC family permease	97.6	65.0	48.3
MGA_4529	LOCUS_45270	sequence1:4858132..4858398(-)	frameshift,internal_stop_codon	4858410..4858412(-)	4858400,4858133	WP_003113879.1	APC family permease	100.0	20.0	61.4
MGA_4530	LOCUS_45280	sequence1:4858410..4858601(-)	frameshift,internal_stop_codon	4858410..4858412(-)	4858400	WP_003113879.1	APC family permease	87.3	12.5	54.5
MGA_4536	LOCUS_45340	sequence1:4863192..4863542(-)	frameshift		4863546,4863819	WP_003900165.1	amino acid permease	88.8	23.7	65.0
MGA_4537	LOCUS_45350	sequence1:4863539..4863820(-)	frameshift		4863546,4863822	WP_003900165.1	amino acid permease	97.8	21.0	74.7
MGA_4538	LOCUS_45360	sequence1:4863808..4864515(-)	frameshift		4863546,4863822	WP_003900165.1	amino acid permease	98.7	53.5	81.0
MGA_4540	LOCUS_45380	sequence1:4866476..4867522(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4544	LOCUS_45420	sequence1:4872874..4873836(+)	frameshift,internal_stop_codon	4873835..4873837(+)	4873422,4873447	WP_235624217.1	SGNH hydrolase domain-containing protein	92.8	43.4	63.5
MGA_4545	LOCUS_45430	sequence1:4873858..4875036(+)	internal_stop_codon	4873834..4873836(+)		WP_235624217.1	SGNH hydrolase domain-containing protein	97.2	53.1	50.4
MGA_4551	LOCUS_45490	sequence1:4881801..4882382(+)	partial			WP_004187737.1	non-ribosomal peptide synthetase	96.4	12.2	28.4
MGA_4552	LOCUS_45500	sequence1:4882461..4883507(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4553	LOCUS_45510	sequence1:4884292..4889052(+)	partial			WP_163682492.1	non-ribosomal peptide synthetase	86.3	24.8	52.9
MGA_4560	LOCUS_45580	sequence1:4895525..4895800(-)	frameshift,internal_stop_codon	4895525..4895527(-)	4895509	WP_003402695.1	glutaredoxin family protein	90.1	84.5	78.0
MGA_4561	LOCUS_45590	sequence1:4895800..4897461(-)	partial			WP_003911183.1	RND transporter MmpL2	93.7	53.4	84.2
MGA_4562	LOCUS_45600	sequence1:4897490..4898536(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4563	LOCUS_45610	sequence1:4898754..4900100(-)	partial			WP_010950409.1	RND transporter MmpL2	94.9	43.9	85.2
MGA_4564	LOCUS_45620	sequence1:4900403..4901449(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4565	LOCUS_45630	sequence1:4901933..4902979(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4568	LOCUS_45660	sequence1:4905271..4906764(+)	partial			WP_010886177.1	PE family protein	24.5	20.9	56.6
MGA_4571	LOCUS_45690	sequence1:4909959..4910426(-)	frameshift		4910494	WP_157890372.1	(2Fe-2S)-binding protein	98.1	71.2	77.0
MGA_4573	LOCUS_45710	sequence1:4910749..4911660(+)	frameshift		4910735	WP_003402684.1	HAD-IB family hydrolase	93.1	76.7	85.0
MGA_4575	LOCUS_45730	sequence1:4912228..4912533(+)	frameshift		4912515	WP_003402621.1	cyclopropane mycolic acid synthase CmaA2	95.0	31.5	80.2
MGA_4576	LOCUS_45740	sequence1:4912530..4913138(+)	frameshift		4912515	WP_010908890.1	cyclopropane mycolic acid synthase family methyltransferase	100.0	66.6	77.6
MGA_4606	LOCUS_46010	sequence1:4941990..4942667(+)	frameshift		4942652	WP_010908906.1	carbon-nitrogen hydrolase family protein	89.8	74.5	83.2
MGA_4622	LOCUS_46170	sequence1:4957215..4958408(+)	partial			WP_003401488.1	type VII secretion system ESX-3 target PPE4	43.8	33.9	61.5
MGA_4623	LOCUS_46180	sequence1:4958467..4959513(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4624	LOCUS_46190	sequence1:4960164..4961168(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	81.1	72.4	30.6
MGA_4633	LOCUS_46280	sequence1:4968611..4968817(-)	internal_stop_codon	4968611..4968613(-)		WP_003901197.1	MMPL family transporter	100.0	17.1	79.4
MGA_4634	LOCUS_46290	sequence1:4969134..4970180(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_4635	LOCUS_46300	sequence1:4970146..4970880(-)	internal_stop_codon	4970890..4970892(-)		WP_012296533.1	RND family transporter	96.3	23.9	70.2
MGA_4636	LOCUS_46310	sequence1:4970890..4972134(-)	internal_stop_codon	4970890..4970892(-),4972135..4972137(-)		WP_010950409.1	RND transporter MmpL2	99.8	42.7	66.3
MGA_4637	LOCUS_46320	sequence1:4972135..4972740(-)	internal_stop_codon	4972135..4972137(-)		WP_011726756.1	MMPL family transporter	100.0	20.8	64.7
MGA_4656	LOCUS_46510	sequence1:4991171..4991482(+)	frameshift		4991437	WP_003402219.1	oxidoreductase	86.4	28.6	71.9
MGA_4657	LOCUS_46520	sequence1:4991500..4992108(+)	frameshift		4991437	WP_003402219.1	oxidoreductase	100.0	64.6	83.7
MGA_4659	LOCUS_46540	sequence1:4993646..4996759(+)	partial			WP_010950597.1	PE family protein	10.8	18.8	58.1
MGA_4662	LOCUS_46570	sequence1:4998894..4999940(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4663	LOCUS_46580	sequence1:4999989..5001245(+)	partial			WP_003402206.1	AAA family ATPase	98.3	56.5	79.6
MGA_4664	LOCUS_46590	sequence1:5001521..5002567(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4665	LOCUS_46600	sequence1:5002592..5003362(+)	partial			WP_003402206.1	AAA family ATPase	98.8	34.8	92.5
MGA_4680	LOCUS_46750	sequence1:5017257..5019455(-)	frameshift		5019660	WP_013227688.1	SpoIIE family protein phosphatase	61.7	33.1	34.5
MGA_4681	LOCUS_46760	sequence1:5019472..5021154(-)	frameshift,internal_stop_codon	5019690..5019692(-)	5019717,5019687	WP_164929092.1	ATP-binding protein	83.2	37.4	39.3
MGA_4691	LOCUS_46860	sequence1:5028448..5029152(-)	internal_stop_codon	5028448..5028450(-)		WP_011085648.1	adenylate/guanylate cyclase domain-containing protein	83.8	45.5	35.2
MGA_4692	LOCUS_46870	sequence1:5029221..5030267(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4693	LOCUS_46880	sequence1:5030585..5031631(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4694	LOCUS_46890	sequence1:5032378..5034453(+)	internal_stop_codon	5034451..5034453(+)		WP_010950855.1	MFS transporter	100.0	65.6	62.5
MGA_4695	LOCUS_46900	sequence1:5034469..5035251(+)	frameshift,internal_stop_codon	5034451..5034453(+)	5035239	WP_003900661.1	MFS transporter	98.8	24.6	66.3
MGA_4696	LOCUS_46910	sequence1:5035248..5035610(+)	frameshift		5035239	WP_010950855.1	MFS transporter	76.7	8.7	56.5
MGA_4702	LOCUS_46970	sequence1:5041613..5042659(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4715	LOCUS_47100	sequence1:5054833..5055618(-)	frameshift		5055634	WP_003898439.1	phosphate acetyltransferase	99.6	37.7	86.9
MGA_4716	LOCUS_47110	sequence1:5055626..5056456(-)	frameshift,internal_stop_codon	5056493..5056495(-)	5055634	WP_003898439.1	phosphate acetyltransferase	98.9	39.6	75.1
MGA_4717	LOCUS_47120	sequence1:5056493..5056933(-)	internal_stop_codon	5056493..5056495(-)		WP_011727187.1	phosphate acetyltransferase	94.5	19.9	72.5
MGA_4720	LOCUS_47150	sequence1:5058902..5061724(-)	partial			WP_003911169.1	type I polyketide synthase	99.8	67.0	61.4
MGA_4721	LOCUS_47160	sequence1:5062040..5063095(+)	frameshift		5062029	WP_003898435.1	RND transporter MmpL1	98.9	36.2	80.1
MGA_4731	LOCUS_47260	sequence1:5071984..5073030(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4733	LOCUS_47280	sequence1:5075518..5076564(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4734	LOCUS_47290	sequence1:5076654..5078099(+)	partial			WP_003898458.1	siderophore RND transporter MmpL4	99.8	49.2	74.2
MGA_4736	LOCUS_47310	sequence1:5079061..5080107(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	29.9
MGA_4737	LOCUS_47320	sequence1:5080383..5080742(-)	partial			WP_003401827.1	PaaI family thioesterase	84.9	47.2	77.2
MGA_4740	LOCUS_47350	sequence1:5082816..5083022(+)	internal_stop_codon	5083020..5083022(+)		WP_003401851.1	site-2 protease family protein	100.0	26.3	85.3
MGA_4741	LOCUS_47360	sequence1:5083047..5083595(+)	internal_stop_codon	5083020..5083022(+)		WP_003401851.1	site-2 protease family protein	99.5	69.9	70.2
MGA_4747	LOCUS_47420	sequence1:5089416..5090462(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4762	LOCUS_47570	sequence1:5104657..5106132(-)	internal_stop_codon	5106181..5106183(-)		WP_003900133.1	aerobic carbon-monoxide dehydrogenase large subunit	100.0	61.5	92.9
MGA_4763	LOCUS_47580	sequence1:5106181..5107047(-)	internal_stop_codon	5106181..5106183(-)		WP_011727162.1	aerobic carbon-monoxide dehydrogenase large subunit	100.0	36.4	89.3
MGA_4764	LOCUS_47590	sequence1:5107044..5107208(-)	internal_stop_codon	5107236..5107238(-)		WP_003401867.1	(2Fe-2S)-binding protein	100.0	34.0	81.5
MGA_4765	LOCUS_47600	sequence1:5107236..5107523(-)	internal_stop_codon	5107236..5107238(-)		WP_003401867.1	(2Fe-2S)-binding protein	100.0	59.7	92.6
MGA_4766	LOCUS_47610	sequence1:5107526..5107768(-)	frameshift		5107772	WP_003401869.1	xanthine dehydrogenase family protein subunit M	95.0	26.6	69.7
MGA_4767	LOCUS_47620	sequence1:5107695..5108354(-)	frameshift		5107772	WP_003401869.1	xanthine dehydrogenase family protein subunit M	88.6	69.2	84.8
MGA_4782	LOCUS_47770	sequence1:5122424..5123470(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4783	LOCUS_47780	sequence1:5123498..5127781(+)	frameshift,internal_stop_codon	5127450..5127452(+),5124618..5124620(+)	5124716,5126244,5127406,5124424,5127643,5127644,5127470	WP_003916655.1	PPE domain-containing protein	96.8	41.8	57.4
MGA_4784	LOCUS_47790	sequence1:5127901..5129325(+)	frameshift		5129253,5129256,5129257,5127643,5129116,5129260,5129259	WP_003916655.1	PPE domain-containing protein	95.1	14.9	46.8
MGA_4786	LOCUS_47810	sequence1:5129963..5133655(+)	frameshift		5130314,5130253	WP_014000186.1	PPE domain-containing protein	99.5	34.9	66.3
MGA_4787	LOCUS_47820	sequence1:5133935..5134981(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_4788	LOCUS_47830	sequence1:5135038..5135250(+)	partial			WP_014000186.1	PPE domain-containing protein	94.3	1.9	65.2
MGA_4789	LOCUS_47840	sequence1:5135581..5142792(+)	partial			WP_122524938.1	PPE domain-containing protein	90.8	70.4	34.5
MGA_4795	LOCUS_47900	sequence1:5148976..5149353(+)	partial			WP_010886091.1	PE family protein	73.6	15.2	45.7
MGA_4803	LOCUS_47980	sequence1:5155757..5157589(+)	frameshift		5155480	WP_011727124.1	Hsp70 family protein	84.1	83.9	44.9
MGA_4810	LOCUS_48050	sequence1:5162986..5163972(-)	frameshift		5163024,5162994,5163012	WP_003901837.1	isoniazid-induced protein IniB	66.2	35.3	43.8
MGA_4813	LOCUS_48080	sequence1:5167183..5168229(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4814	LOCUS_48090	sequence1:5168198..5168821(+)	partial			WP_003401735.1	isoniazid response ATPase/transcriptional regulator IniR	57.5	15.4	65.6
MGA_4817	LOCUS_48120	sequence1:5173313..5176369(-)	internal_stop_codon	5173313..5173315(-)		WP_010950544.1	PE family protein	12.0	24.8	50.8
MGA_4818	LOCUS_48130	sequence1:5176960..5178006(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4819	LOCUS_48140	sequence1:5178138..5179487(+)	partial			WP_010886128.1	PE family protein	25.2	12.4	54.0
MGA_4820	LOCUS_48150	sequence1:5179669..5180757(+)	frameshift		5180598	WP_003911027.1	PE family protein	32.0	26.4	45.7
MGA_4823	LOCUS_48180	sequence1:5182040..5182336(-)	frameshift		5182334	WP_003401666.1	nuclear transport factor 2 family protein	92.9	73.4	70.3
MGA_4825	LOCUS_48200	sequence1:5183268..5183441(-)	internal_stop_codon	5183481..5183483(-)		WP_003898400.1	UDP-glucose/GDP-mannose dehydrogenase family protein	87.7	11.3	82.0
MGA_4826	LOCUS_48210	sequence1:5183481..5184602(-)	internal_stop_codon	5183481..5183483(-)		WP_003898400.1	UDP-glucose/GDP-mannose dehydrogenase family protein	100.0	84.2	87.7
MGA_4827	LOCUS_48220	sequence1:5184679..5186205(-)	frameshift		5184637	WP_011727115.1	hypothetical protein	64.8	59.4	43.8
MGA_4828	LOCUS_48230	sequence1:5186361..5187911(-)	frameshift		5188025	WP_011727115.1	hypothetical protein	61.4	61.2	40.7
MGA_4832	LOCUS_48270	sequence1:5190278..5190694(-)	partial			WP_012640167.1	DUF1330 domain-containing protein	88.4	74.2	34.4
MGA_4837	LOCUS_48320	sequence1:5194076..5195122(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_4841	LOCUS_48360	sequence1:5197735..5198844(-)	partial			WP_063170440.1	zinc-dependent alcohol dehydrogenase family protein	55.0	62.3	29.4
MGA_4846	LOCUS_48410	sequence1:5202005..5203051(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4847	LOCUS_48420	sequence1:5203162..5203863(-)	partial			WP_003114574.1	3-dehydroquinate synthase	76.0	47.3	41.8
MGA_4849	LOCUS_48440	sequence1:5205685..5206053(+)	internal_stop_codon	5206051..5206053(+)		WP_011089205.1	alpha/beta hydrolase fold domain-containing protein	86.9	11.8	62.3
MGA_4850	LOCUS_48450	sequence1:5206057..5206473(+)	internal_stop_codon	5206051..5206053(+),5206471..5206473(+)		WP_011089205.1	alpha/beta hydrolase fold domain-containing protein	98.6	15.3	54.0
MGA_4851	LOCUS_48460	sequence1:5206546..5207424(+)	frameshift,internal_stop_codon	5206471..5206473(+)	5207328,5207685	WP_011089205.1	alpha/beta hydrolase fold domain-containing protein	89.4	29.4	58.2
MGA_4852	LOCUS_48470	sequence1:5207346..5207777(+)	frameshift		5207328,5207685	WP_011089205.1	alpha/beta hydrolase fold domain-containing protein	80.4	12.8	64.3
MGA_4853	LOCUS_48480	sequence1:5207717..5208268(+)	frameshift		5207684	WP_011089205.1	alpha/beta hydrolase fold domain-containing protein	94.5	19.2	63.0
MGA_4858	LOCUS_48530	sequence1:5211562..5212893(-)	partial			WP_010886106.1	PE family protein	16.3	15.6	63.9
MGA_4861	LOCUS_48560	sequence1:5214343..5214957(+)	frameshift		5214302	WP_011730628.1	mannitol dehydrogenase family protein	97.1	41.8	65.5
MGA_4866	LOCUS_48610	sequence1:5220097..5221143(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4870	LOCUS_48650	sequence1:5223448..5224884(-)	partial			WP_011727115.1	hypothetical protein	68.2	59.4	38.4
MGA_4880	LOCUS_48750	sequence1:5232060..5232521(+)	internal_stop_codon	5232519..5232521(+)		WP_003401544.1	sulfatase	92.2	30.3	80.9
MGA_4881	LOCUS_48760	sequence1:5232639..5233457(+)	internal_stop_codon	5232519..5232521(+)		WP_003401544.1	sulfatase	99.6	58.1	70.6
MGA_4895	LOCUS_48900	sequence1:5251027..5251767(-)	internal_stop_codon	5251027..5251029(-)		WP_003401448.1	class I SAM-dependent methyltransferase	100.0	81.8	78.9
MGA_4899	LOCUS_48940	sequence1:5255261..5255632(-)	frameshift		5255598	WP_005079442.1	hypothetical protein	93.5	63.5	62.6
MGA_4900	LOCUS_48950	sequence1:5255832..5257427(+)	internal_stop_codon	5257425..5257427(+)		WP_003401392.1	acyl-CoA dehydrogenase family protein	100.0	72.5	82.8
MGA_4901	LOCUS_48960	sequence1:5257440..5258018(+)	internal_stop_codon	5257425..5257427(+)		WP_003401392.1	acyl-CoA dehydrogenase family protein	100.0	26.8	84.7
MGA_4918	LOCUS_49130	sequence1:5276956..5278002(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4938	LOCUS_49330	sequence1:5300624..5301511(+)	frameshift		5301433	WP_003401279.1	lipase maturation factor family protein	95.6	58.5	77.7
MGA_4939	LOCUS_49340	sequence1:5301505..5302047(+)	frameshift		5301433	WP_003401279.1	lipase maturation factor family protein	99.4	37.1	81.0
MGA_4940	LOCUS_49350	sequence1:5302129..5304501(-)	partial			WP_010950451.1	PE family protein	15.7	14.9	59.7
MGA_4944	LOCUS_49390	sequence1:5308580..5308819(-)	frameshift		5308874	WP_003401265.1	acyl-CoA dehydrogenase family protein	100.0	13.9	72.2
MGA_4945	LOCUS_49400	sequence1:5308719..5309384(-)	frameshift		5308872,5309403,5309574	WP_003401265.1	acyl-CoA dehydrogenase family protein	76.9	29.9	87.6
MGA_4946	LOCUS_49410	sequence1:5309914..5310960(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_4947	LOCUS_49420	sequence1:5310957..5311658(-)	partial			WP_003401265.1	acyl-CoA dehydrogenase family protein	97.4	40.0	84.1
MGA_4948	LOCUS_49430	sequence1:5311800..5313326(+)	partial			WP_003911027.1	PE family protein	24.6	28.7	59.5
MGA_4949	LOCUS_49440	sequence1:5313369..5314589(-)	partial			WP_004081285.1	DNA polymerase III subunit alpha	40.4	11.9	34.7
MGA_4950	LOCUS_49450	sequence1:5315313..5316053(+)	partial			WP_003899159.1	hypothetical protein	57.7	44.0	65.5
MGA_4953	LOCUS_49480	sequence1:5317207..5318259(+)	partial			WP_003409874.1	hypothetical protein	61.7	71.7	54.5
MGA_4969	LOCUS_49640	sequence1:5332519..5336370(-)	partial			WP_027084589.1	non-ribosomal peptide synthetase	50.2	19.5	33.7
MGA_4983	LOCUS_49780	sequence1:5352051..5352449(+)	partial			WP_013228395.1	CD225/dispanin family protein	47.7	51.2	51.5
MGA_5000	LOCUS_49950	sequence1:5374868..5376034(-)	frameshift,internal_stop_codon	5374867..5374869(-)	5376039	WP_003908489.1	molybdopterin oxidoreductase family protein	100.0	51.6	78.9
MGA_5001	LOCUS_49960	sequence1:5375983..5377104(-)	frameshift		5376039	WP_010886070.1	molybdopterin oxidoreductase family protein	98.7	48.3	79.9
MGA_5003	LOCUS_49980	sequence1:5377874..5378899(-)	partial			WP_003916225.1	L,D-transpeptidase LdtMt4	73.9	68.9	87.3
MGA_5008	LOCUS_50030	sequence1:5382743..5385574(+)	partial			WP_009939865.1	PE family protein	12.3	21.8	54.3
MGA_5009	LOCUS_50040	sequence1:5385896..5386636(-)	partial			WP_003401122.1	beta-glucosidase	100.0	35.6	65.4
MGA_5010	LOCUS_50050	sequence1:5386662..5387708(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	29.9
MGA_5011	LOCUS_50060	sequence1:5387926..5388492(-)	frameshift		5388637	WP_010950358.1	beta-glucosidase	86.2	23.4	72.8
MGA_5012	LOCUS_50070	sequence1:5388392..5389408(-)	frameshift		5388637	WP_010950358.1	beta-glucosidase	70.1	34.3	84.8
MGA_5036	LOCUS_50310	sequence1:5413970..5415016(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_5044	LOCUS_50390	sequence1:5421851..5422621(-)	internal_stop_codon	5422637..5422639(-)		WP_014877431.1	cytochrome P450	100.0	61.5	69.9
MGA_5045	LOCUS_50400	sequence1:5422637..5422975(-)	internal_stop_codon	5423003..5423005(-),5422637..5422639(-)		WP_014877431.1	cytochrome P450	100.0	26.9	66.1
MGA_5049	LOCUS_50440	sequence1:5425761..5426117(+)	frameshift		5426114	WP_011728430.1	phosphotransferase	94.9	29.6	58.9
MGA_5050	LOCUS_50450	sequence1:5426174..5426929(+)	frameshift		5426114	WP_011728430.1	phosphotransferase	96.8	62.5	59.0
MGA_5053	LOCUS_50480	sequence1:5428561..5428743(-)	frameshift		5428754	WP_011728746.1	thioesterase family protein	95.0	19.1	82.5
MGA_5064	LOCUS_50590	sequence1:5439388..5440434(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_5065	LOCUS_50600	sequence1:5440956..5441456(+)	internal_stop_codon	5441454..5441456(+)		WP_010950355.1	PE-PPE domain-containing protein	100.0	33.3	43.8
MGA_5066	LOCUS_50610	sequence1:5441481..5442437(+)	internal_stop_codon	5441454..5441456(+)		WP_003911094.1	PE-PPE domain-containing protein	97.5	65.8	52.1
MGA_5074	LOCUS_50690	sequence1:5448056..5448571(+)	internal_stop_codon	5448569..5448571(+)		WP_003401015.1	acyl-CoA dehydrogenase	94.2	40.0	85.1
MGA_5075	LOCUS_50700	sequence1:5448617..5449183(+)	internal_stop_codon	5449181..5449183(+),5448569..5448571(+)		WP_003401015.1	acyl-CoA dehydrogenase	100.0	46.7	89.9
MGA_5076	LOCUS_50710	sequence1:5449299..5449694(+)	internal_stop_codon	5449692..5449694(+)		WP_003401010.1	tyrosine-protein phosphatase PtbB	95.4	46.0	77.5
MGA_5077	LOCUS_50720	sequence1:5449701..5450129(+)	internal_stop_codon	5449692..5449694(+)		WP_010950352.1	tyrosine-protein phosphatase PtbB	99.3	51.1	78.7
MGA_5078	LOCUS_50730	sequence1:5450258..5451304(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_5079	LOCUS_50740	sequence1:5451767..5452285(+)	frameshift,internal_stop_codon	5452284..5452286(+)	5451716	WP_003400998.1	PE-PPE domain-containing protein	100.0	29.3	59.9
MGA_5080	LOCUS_50750	sequence1:5452355..5453281(+)	internal_stop_codon	5452283..5452285(+)		WP_003400998.1	PE-PPE domain-containing protein	99.0	51.9	72.5
MGA_5084	LOCUS_50790	sequence1:5459858..5463742(+)	internal_stop_codon	5463740..5463742(+)		WP_169347939.1	non-ribosomal peptide synthase/polyketide synthase	59.8	11.9	39.9
MGA_5086	LOCUS_50810	sequence1:5463923..5464444(+)	frameshift		5464408	WP_013226632.1	non-ribosomal peptide synthetase	92.5	6.7	41.2
MGA_5087	LOCUS_50820	sequence1:5464462..5465196(+)	frameshift		5465169,5465139,5465172,5464517,5465175,5465178,5465163	WP_169347939.1	non-ribosomal peptide synthase/polyketide synthase	92.2	3.4	34.5
MGA_5088	LOCUS_50830	sequence1:5465162..5469427(+)	frameshift		5465193,5465139,5465172	WP_013224968.1	non-ribosomal peptide synthetase	85.1	17.3	37.2
MGA_5089	LOCUS_50840	sequence1:5469433..5469873(+)	partial			WP_011267336.1	alpha/beta fold hydrolase	95.2	54.0	42.4
MGA_5090	LOCUS_50850	sequence1:5469874..5470920(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	29.9
MGA_5091	LOCUS_50860	sequence1:5471241..5471534(+)	partial			WP_013229866.1	alpha/beta fold hydrolase	84.5	33.1	40.2
MGA_5094	LOCUS_50890	sequence1:5475786..5477864(-)	partial			WP_003899905.1	serine/threonine protein kinase PknK	76.0	49.6	37.3
MGA_5103	LOCUS_50980	sequence1:5486020..5486658(-)	frameshift,internal_stop_codon	5486659..5486661(-)	5486692	WP_003400961.1	TetR/AcrR family transcriptional regulator	98.6	74.6	68.4
MGA_5114	LOCUS_51090	sequence1:5495483..5495695(+)	partial			WP_003977449.1	TOBE domain-containing protein	92.9	45.3	47.7
MGA_5123	LOCUS_51180	sequence1:5503730..5504422(-)	frameshift		5504424	WP_011727866.1	ferredoxin reductase	100.0	63.6	62.9
MGA_5131	LOCUS_51260	sequence1:5511123..5512169(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	29.9
MGA_5144	LOCUS_51390	sequence1:5527647..5528693(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_5157	LOCUS_51520	sequence1:5543552..5544862(+)	frameshift		5543472	WP_011730667.1	SMP-30/gluconolactonase/LRE family protein	99.5	81.3	66.4
MGA_5163	LOCUS_51580	sequence1:5549504..5551099(-)	partial			WP_010886066.1	PE family protein	20.3	21.8	63.9
MGA_5164	LOCUS_51590	sequence1:5551127..5551471(-)	partial			WP_011391058.1	transposase	66.7	49.3	45.5
MGA_5165	LOCUS_51600	sequence1:5551520..5552566(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_5180	LOCUS_51750	sequence1:5568951..5569823(-)	partial			WP_003911847.1	phospholipase C	100.0	55.8	75.5
MGA_5183	LOCUS_51780	sequence1:5571549..5572781(-)	frameshift		5571671	WP_013226651.1	cytochrome P450	87.3	80.6	41.2
MGA_5189	LOCUS_51840	sequence1:5578138..5579184(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_5191	LOCUS_51860	sequence1:5580334..5581020(+)	frameshift		5580960,5580978	WP_003417912.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	83.3	57.8	80.0
MGA_5192	LOCUS_51870	sequence1:5581049..5581333(+)	frameshift		5580978,5580963	WP_003417912.1	4-hydroxy-3-methylbut-2-enyl diphosphate reductase	97.9	28.0	69.6
MGA_5194	LOCUS_51890	sequence1:5583180..5583401(+)	internal_stop_codon	5583399..5583401(+)		WP_003899517.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	100.0	18.9	78.1
MGA_5195	LOCUS_51900	sequence1:5583519..5584343(+)	internal_stop_codon	5583399..5583401(+)		WP_036453060.1	flavodoxin-dependent (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase	99.3	71.4	85.7
MGA_5196	LOCUS_51910	sequence1:5584344..5585639(+)	partial			WP_013228930.1	cytochrome P450	68.4	72.7	35.1
MGA_5197	LOCUS_51920	sequence1:5585626..5586021(+)	frameshift		5585913	WP_003896236.1	amidohydrolase family protein	74.8	22.7	82.7
MGA_5198	LOCUS_51930	sequence1:5585909..5586445(+)	frameshift		5585913	WP_003896236.1	amidohydrolase family protein	96.6	40.1	71.7
MGA_5200	LOCUS_51950	sequence1:5587840..5588265(+)	partial			WP_003896236.1	amidohydrolase family protein	90.1	29.5	75.6
MGA_5217	LOCUS_52120	sequence1:5610636..5611190(-)	internal_stop_codon	5611206..5611208(-)		WP_010950405.1	siderophore RND transporter MmpL4	94.0	17.6	80.9
MGA_5218	LOCUS_52130	sequence1:5611206..5611703(-)	internal_stop_codon	5611800..5611802(-),5611206..5611208(-)		WP_010908861.1	RND family transporter	100.0	17.2	78.2
MGA_5219	LOCUS_52140	sequence1:5611800..5612216(-)	frameshift,internal_stop_codon	5611799..5611801(-)	5612311	WP_010950405.1	siderophore RND transporter MmpL4	100.0	14.3	76.8
MGA_5220	LOCUS_52150	sequence1:5612216..5613547(-)	frameshift		5612314	WP_003898458.1	siderophore RND transporter MmpL4	91.6	42.0	73.2
MGA_5232	LOCUS_52270	sequence1:5622925..5624532(-)	partial			WP_010950451.1	PE family protein	22.8	14.7	53.3
MGA_5233	LOCUS_52280	sequence1:5624683..5625642(+)	frameshift		5625495	WP_005110593.1	NDMA-dependent alcohol dehydrogenase	85.0	69.8	43.2
MGA_5241	LOCUS_52360	sequence1:5632374..5632847(-)	partial			WP_003400664.1	SRPBCC family protein	98.7	69.2	76.8
MGA_5245	LOCUS_52400	sequence1:5636556..5637719(-)	partial			WP_010920958.1	aromatic ring-hydroxylating dioxygenase subunit alpha	76.2	73.3	26.9
MGA_5250	LOCUS_52450	sequence1:5641132..5641374(-)	frameshift		5641388	WP_003401963.1	hypothetical protein	100.0	38.0	46.9
MGA_5251	LOCUS_52460	sequence1:5641329..5641751(-)	frameshift		5641388	WP_003401963.1	hypothetical protein	85.0	57.7	46.0
MGA_5256	LOCUS_52510	sequence1:5645182..5645505(+)	internal_stop_codon	5645503..5645505(+)		WP_005112233.1	sulfotransferase	79.4	22.7	40.9
MGA_5257	LOCUS_52520	sequence1:5645662..5646396(+)	internal_stop_codon	5645503..5645505(+)		WP_005094688.1	sulfotransferase	92.2	53.3	32.2
MGA_5259	LOCUS_52540	sequence1:5647736..5648974(+)	partial			WP_010920958.1	aromatic ring-hydroxylating dioxygenase subunit alpha	42.0	43.3	36.0
MGA_5260	LOCUS_52550	sequence1:5649543..5652500(+)	partial			WP_013226813.1	aminomethyl-transferring glycine dehydrogenase	45.8	47.0	58.8
MGA_5261	LOCUS_52560	sequence1:5652481..5653149(+)	internal_stop_codon	5653147..5653149(+)		WP_013223708.1	glycine cleavage system aminomethyltransferase GcvT	98.2	59.0	55.0
MGA_5262	LOCUS_52570	sequence1:5653183..5653575(+)	internal_stop_codon	5653147..5653149(+)		WP_013223708.1	glycine cleavage system aminomethyltransferase GcvT	96.9	34.7	54.7
MGA_5269	LOCUS_52640	sequence1:5660272..5661318(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_5273	LOCUS_52680	sequence1:5664019..5664318(-)	partial			WP_003420544.1	lipoprotein LpqH	99.0	61.6	80.6
MGA_5274	LOCUS_52690	sequence1:5664684..5665268(+)	frameshift		5665211	WP_003900750.1	alkyl/aryl-sulfatase	90.7	28.1	88.6
MGA_5275	LOCUS_52700	sequence1:5665265..5666563(+)	frameshift		5665211	WP_003900750.1	alkyl/aryl-sulfatase	100.0	69.0	75.9
MGA_5276	LOCUS_52710	sequence1:5666570..5667331(-)	frameshift		5667365	WP_011730118.1	NADPH:quinone oxidoreductase family protein	98.0	76.2	46.8
MGA_5281	LOCUS_52760	sequence1:5671455..5673818(-)	partial			WP_010886108.1	PE family protein	15.6	14.3	52.0
MGA_5282	LOCUS_52770	sequence1:5674027..5677140(-)	partial			WP_010886177.1	PE family protein	11.1	20.2	42.9
MGA_5284	LOCUS_52790	sequence1:5678243..5678848(+)	internal_stop_codon	5678846..5678848(+)		WP_003420539.1	phosphotransferase family protein	99.5	57.3	80.6
MGA_5285	LOCUS_52800	sequence1:5678864..5679295(+)	internal_stop_codon	5678846..5678848(+)		WP_003420539.1	phosphotransferase family protein	97.9	39.9	84.3
MGA_5307	LOCUS_53020	sequence1:5691910..5692269(-)	internal_stop_codon	5691910..5691912(-)		WP_005132930.1	NINE protein	57.1	57.6	47.1
MGA_5310	LOCUS_53050	sequence1:5694129..5694914(+)	frameshift		5693985,5694039,5693967	WP_041272198.1	alkyl/aryl-sulfatase	90.0	55.8	31.7
MGA_5316	LOCUS_53110	sequence1:5698840..5701551(-)	partial			WP_011731067.1	non-ribosomal peptide synthetase	98.2	67.4	67.3
MGA_5317	LOCUS_53120	sequence1:5701590..5702636(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_5318	LOCUS_53130	sequence1:5702916..5704139(-)	partial			WP_011731067.1	non-ribosomal peptide synthetase	97.3	30.2	80.3
MGA_5329	LOCUS_53240	sequence1:5716290..5717339(+)	frameshift		5717261	WP_003420440.1	wax ester/triacylglycerol synthase family O-acyltransferase	96.8	74.4	82.2
MGA_5330	LOCUS_53250	sequence1:5717273..5717647(+)	frameshift		5717267	WP_003420440.1	wax ester/triacylglycerol synthase family O-acyltransferase	100.0	27.3	86.3
MGA_5339	LOCUS_53340	sequence1:5725304..5725510(-)	internal_stop_codon	5725304..5725306(-)		WP_003401485.1	type VII secretion system ESX-3 target PE5	98.5	65.7	44.8
MGA_5342	LOCUS_53370	sequence1:5728596..5728772(+)	frameshift		5728650	WP_003399940.1	type VII secretion system ESX-1 WXG100 family target CFP-10	74.1	43.0	88.4
MGA_5346	LOCUS_53410	sequence1:5732281..5732409(-)	partial			WP_003399963.1	type VII secretion system ESX-1 WXG100 family target ESAT-6	97.6	43.2	90.2
MGA_5349	LOCUS_53440	sequence1:5734198..5735367(-)	frameshift		5735387	WP_003899118.1	PecA family PE domain-processing aspartic protease	12.3	8.6	66.7
MGA_5350	LOCUS_53450	sequence1:5735316..5735699(-)	frameshift		5735390	WP_099318959.1	PE family protein	76.4	21.2	51.5
MGA_5354	LOCUS_53490	sequence1:5738082..5739128(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_5355	LOCUS_53500	sequence1:5739455..5739679(+)	partial			WP_163719979.1	phosphotransferase family protein	97.3	21.7	84.7
MGA_5360	LOCUS_53550	sequence1:5743101..5743349(+)	internal_stop_codon	5743347..5743349(+)		WP_010907540.1	lipase LipE	100.0	20.0	84.1
MGA_5361	LOCUS_53560	sequence1:5743422..5743904(+)	internal_stop_codon	5743347..5743349(+)		WP_003420590.1	lipase LipE	95.6	36.9	88.9
MGA_5370	LOCUS_53650	sequence1:5752600..5753955(-)	partial			WP_003113577.1	alpha/beta fold hydrolase	57.4	81.2	33.0
MGA_5371	LOCUS_53660	sequence1:5754242..5755222(+)	partial			WP_003908846.1	PE family protein	39.3	35.2	36.7
MGA_5375	LOCUS_53700	sequence1:5757551..5758633(+)	frameshift		5758624,5758609	WP_010950597.1	PE family protein	37.5	21.0	60.0
MGA_5377	LOCUS_53720	sequence1:5759426..5759854(-)	partial			WP_003406541.1	amidohydrolase family protein	95.8	54.8	57.4
MGA_5378	LOCUS_53730	sequence1:5760256..5761302(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_5379	LOCUS_53740	sequence1:5761591..5761911(+)	partial			WP_003420612.1	NAD-dependent epimerase/dehydratase family protein	96.2	31.3	75.5
MGA_5395	LOCUS_53900	sequence1:5784422..5785468(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_5396	LOCUS_53910	sequence1:5785937..5786602(+)	frameshift,internal_stop_codon	5786600..5786602(+)	5786578,5786581,5786623	WP_010950451.1	PE family protein	59.7	15.9	56.8
MGA_5424	LOCUS_54190	sequence1:5824524..5824874(+)	frameshift		5824868	WP_003899719.1	metallopeptidase family protein	99.1	83.9	81.7
MGA_5425	LOCUS_54200	sequence1:5825154..5825705(-)	internal_stop_codon	5825724..5825726(-)		WP_003899720.1	histidine phosphatase family protein	98.9	79.7	71.9
MGA_5429	LOCUS_54240	sequence1:5827760..5828989(+)	partial			WP_235624060.1	LCP family protein	78.7	74.3	65.5
MGA_5432	LOCUS_54270	sequence1:5830575..5831363(-)	partial			WP_003899726.1	DUF4328 domain-containing protein	100.0	72.2	58.4
MGA_5435	LOCUS_54300	sequence1:5833998..5834750(+)	internal_stop_codon	5834748..5834750(+)		WP_010950948.1	TMEM165/GDT1 family protein	90.0	75.2	63.3
MGA_5452	LOCUS_54470	sequence1:5853912..5854958(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.5
MGA_5453	LOCUS_54480	sequence1:5854927..5855610(+)	partial			WP_003399879.1	type VII secretion system ESX-1 target PPE68	78.4	50.3	34.8
MGA_5454	LOCUS_54490	sequence1:5855827..5856003(+)	frameshift		5855881	WP_003399940.1	type VII secretion system ESX-1 WXG100 family target CFP-10	74.1	43.0	86.0
MGA_5456	LOCUS_54510	sequence1:5858216..5859091(+)	frameshift		5857991	WP_003909105.1	type VII secretion system ESX-1 associated protein EspI	99.3	43.4	66.8
MGA_5458	LOCUS_54530	sequence1:5860766..5861812(+)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_5459	LOCUS_54540	sequence1:5862285..5863121(+)	partial			WP_003901751.1	type VII secretion system ESX-1 associated protein EspJ	83.5	73.9	47.9
MGA_5461	LOCUS_54560	sequence1:5863917..5864963(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.6
MGA_5462	LOCUS_54570	sequence1:5865243..5866205(-)	partial			WP_010950952.1	type VII secretion system ESX-1 associated protein EspK	67.2	29.0	53.2
MGA_5463	LOCUS_54580	sequence1:5866614..5867225(-)	partial			WP_003400000.1	type VII secretion system ESX-1 subunit EccE1	90.6	37.4	70.1
MGA_5464	LOCUS_54590	sequence1:5867222..5867587(-)	frameshift		5867762	WP_003400004.1	type VII secretion system ESX-1 serine protease mycosin MycP1	78.5	21.3	76.8
MGA_5465	LOCUS_54600	sequence1:5867631..5868626(-)	frameshift		5867762	WP_003400004.1	type VII secretion system ESX-1 serine protease mycosin MycP1	80.7	59.9	83.5
MGA_5466	LOCUS_54610	sequence1:5868817..5869470(-)	partial			WP_003400005.1	type VII secretion system ESX-2 AAA family ATPase EccA2	84.3	29.6	87.4
MGA_5467	LOCUS_54620	sequence1:5869474..5869761(-)	partial			WP_003917259.1	hypothetical protein	100.0	31.5	85.3
MGA_5475	LOCUS_54700	sequence1:5875771..5876259(-)	partial			WP_003899161.1	hypothetical protein	87.7	70.6	45.1
MGA_5478	LOCUS_54730	sequence1:5879169..5879366(-)	frameshift		5879391	WP_003400109.1	hypothetical protein	73.8	28.4	66.7
MGA_5479	LOCUS_54740	sequence1:5879359..5879652(-)	frameshift		5879391	WP_003400109.1	hypothetical protein	96.9	54.4	57.4
MGA_5483	LOCUS_54780	sequence1:5884529..5886331(+)	frameshift		5886274	WP_003902580.1	murein biosynthesis integral membrane protein MurJ	97.2	49.2	76.3
MGA_5484	LOCUS_54790	sequence1:5886361..5888070(+)	frameshift		5886274	WP_003902580.1	murein biosynthesis integral membrane protein MurJ	98.4	47.3	71.8
MGA_5501	LOCUS_54950	sequence2:2920..3900(-)	partial			WP_007051774.1	AAA family ATPase	71.2	69.7	30.1
MGA_5503	LOCUS_54970	sequence2:5663..6394(+)	partial			WP_003400393.1	C40 family peptidase	57.6	53.7	49.0
MGA_5508	LOCUS_55020	sequence2:8784..9332(+)	partial			WP_002115134.1	transcription termination factor NusA	81.3	29.6	37.8
MGA_5510	LOCUS_55040	sequence2:10376..15748(+)	partial			WP_011861367.1	DEAD/DEAH box helicase family protein	54.8	34.3	31.6
MGA_5521	LOCUS_55150	sequence2:23570..24022(-)	partial			WP_005133076.1	hypothetical protein	49.3	59.7	51.4
MGA_5523	LOCUS_55170	sequence2:25544..26533(+)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	55.6	30.7	32.1
MGA_5527	LOCUS_55210	sequence2:28621..29766(+)	partial			WP_003905037.1	IS110 family transposase	88.7	59.1	59.8
MGA_5529	LOCUS_55230	sequence2:30848..31894(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_5535	LOCUS_55290	sequence2:36768..38555(+)	partial			WP_011459240.1	IS1634 family transposase	63.5	64.5	27.2
MGA_5538	LOCUS_55320	sequence2:41117..42244(-)	partial			WP_011459240.1	IS1634 family transposase	67.5	41.2	27.0
MGA_5539	LOCUS_55330	sequence2:42329..43375(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_5542	LOCUS_55360	sequence2:44815..84906(-)	partial			WP_206334115.1	type I polyketide synthase	28.4	73.4	42.8
MGA_5545	LOCUS_55390	sequence2:87369..87620(-)	partial			WP_011142671.1	IS6 family transposase	59.0	20.8	67.3
MGA_5546	LOCUS_55400	sequence2:87889..88383(-)	partial			WP_193489449.1	integrase core domain-containing protein	56.7	51.7	76.3
MGA_5547	LOCUS_55410	sequence2:88571..88897(-)	frameshift,internal_stop_codon	88571..88573(-)	88384,88450	WP_085976166.1	IS3 family transposase	54.6	15.5	69.5
MGA_5549	LOCUS_55430	sequence2:90070..90225(-)	frameshift		90209	WP_085976166.1	IS3 family transposase	74.5	10.0	84.2
MGA_5550	LOCUS_55440	sequence2:90584..92239(-)	partial			WP_011459240.1	IS1634 family transposase	68.6	64.5	27.2
MGA_5552	LOCUS_55460	sequence2:93998..101089(-)	frameshift		97363,97308	WP_015508323.1	type I polyketide synthase	89.0	26.2	45.8
MGA_5553	LOCUS_55470	sequence2:101199..129338(-)	frameshift		125728,129475,125830,125800,125775,125875,114711,125689,114750	WP_015508323.1	type I polyketide synthase	53.3	62.4	44.1
MGA_5554	LOCUS_55480	sequence2:129290..150841(-)	frameshift		148450,129475,148420,148309,148395,148348,148495	WP_015508323.1	type I polyketide synthase	49.6	43.6	43.1
MGA_5555	LOCUS_55490	sequence2:152338..152589(-)	partial			WP_011142671.1	IS6 family transposase	59.0	20.8	67.3
MGA_5556	LOCUS_55500	sequence2:152858..153352(-)	partial			WP_193489449.1	integrase core domain-containing protein	56.7	51.7	76.3
MGA_5557	LOCUS_55510	sequence2:153540..153866(-)	frameshift,internal_stop_codon	153540..153542(-)	153353,153419	WP_085976166.1	IS3 family transposase	54.6	15.5	69.5
MGA_5559	LOCUS_55530	sequence2:155039..155194(-)	frameshift		155178	WP_085976166.1	IS3 family transposase	74.5	10.0	84.2
MGA_5562	LOCUS_55560	sequence2:158836..159882(-)	partial			WP_011072192.1	ISAs1-like element ISSod22 family transposase	77.9	72.4	30.2
MGA_5563	LOCUS_55570	sequence2:160307..161200(-)	frameshift		161199	WP_164929392.1	IS3-like element ISGvi5 family transposase	96.3	70.5	39.4
MGA_5564	LOCUS_55580	sequence2:161197..161487(-)	frameshift		161229	WP_111336119.1	IS3 family transposase	85.4	21.9	45.3
MGA_5566	LOCUS_55600	sequence2:162010..162291(+)	frameshift		162283,161974	WP_085976166.1	IS3 family transposase	98.9	24.1	72.8
MGA_5567	LOCUS_55610	sequence2:162311..162844(+)	frameshift		162285	WP_085976166.1	IS3 family transposase	100.0	46.5	75.1
