# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_2	LOCUS_00010	sequence01:495..653(+)	frameshift		487	WP_003131545.1	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	100.0	13.8	90.4
MGA_3	LOCUS_00020	sequence01:625..1017(+)	frameshift		487	WP_003131545.1	sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC	88.5	30.4	53.9
MGA_12	LOCUS_00110	sequence01:6837..7103(+)	frameshift		7040	WP_010905558.1	cystathionine gamma-synthase	78.4	18.2	82.6
MGA_13	LOCUS_00120	sequence01:7042..7992(+)	frameshift		7040	WP_010905558.1	cystathionine gamma-synthase	99.1	82.4	73.5
MGA_26	LOCUS_00250	sequence01:20058..20528(+)	internal_stop_codon	20526..20528(+)		WP_012775129.1	DNA-processing protein DprA	98.7	55.0	53.2
MGA_27	LOCUS_00260	sequence01:20619..20927(+)	internal_stop_codon	20526..20528(+)		WP_001015240.1	DNA-processing protein DprA	91.2	32.9	65.6
MGA_34	LOCUS_00330	sequence01:28441..28767(+)	frameshift		28761	WP_002288290.1	MerR family transcriptional regulator	82.4	61.8	65.2
MGA_35	LOCUS_00340	sequence01:28706..28930(+)	frameshift		28761	WP_011460578.1	MerR family transcriptional regulator	75.7	35.9	41.1
MGA_38	LOCUS_00370	sequence01:30815..32398(-)	frameshift		32403	WP_002387348.1	cation-transporting P-type ATPase	98.9	62.0	48.1
MGA_39	LOCUS_00380	sequence01:32335..33327(-)	partial			WP_002287556.1	HAD-IC family P-type ATPase	93.6	36.2	46.0
MGA_50	LOCUS_00490	sequence01:43673..44356(-)	partial			WP_010905550.1	hypothetical protein	59.9	57.3	40.3
MGA_71	LOCUS_00700	sequence01:64002..65174(-)	partial			WP_002387476.1	family 20 glycosylhydrolase	99.0	46.7	57.8
MGA_96	LOCUS_00950	sequence01:92806..93081(-)	frameshift		93110	WP_002355746.1	ring-cleaving dioxygenase	69.2	21.3	63.5
MGA_97	LOCUS_00960	sequence01:93078..93701(-)	frameshift		93110	WP_010989561.1	VOC family protein	94.2	68.8	35.9
MGA_106	LOCUS_01050	sequence01:101021..102400(-)	frameshift		102503	WP_003131601.1	sodium:proton antiporter	99.3	66.6	47.5
MGA_107	LOCUS_01060	sequence01:102468..103079(-)	frameshift		102503	WP_003131601.1	sodium:proton antiporter	94.1	28.1	67.5
MGA_110	LOCUS_01090	sequence01:104138..105235(-)	partial			WP_009896103.1	GGDEF domain-containing protein	43.6	26.4	35.6
MGA_147	LOCUS_01460	sequence01:139558..140853(-)	partial			WP_011104962.1	SIR2 family protein	53.4	71.6	29.9
MGA_176	LOCUS_01750	sequence01:174838..174966(-)	partial			WP_011102204.1	6-phospho-beta-glucosidase	100.0	8.6	76.2
MGA_241	LOCUS_02390	sequence02:42228..43436(+)	partial			WP_011674714.1	C39 family peptidase	43.8	48.3	44.6
MGA_318	LOCUS_03160	sequence03:46230..46397(+)	frameshift		46228	WP_010905661.1	ABC transporter permease	96.4	9.8	47.2
MGA_322	LOCUS_03200	sequence03:48806..49408(+)	partial			WP_010706863.1	DUF6287 domain-containing protein	61.5	44.1	46.0
MGA_344	LOCUS_03410	sequence04:25..1353(-)	partial			WP_011109429.1	C39 family peptidase	36.7	20.9	46.7
MGA_377	LOCUS_03740	sequence04:36193..38301(-)	partial			WP_010990081.1	class 1 internalin InlJ	76.8	57.5	28.7
MGA_396	LOCUS_03930	sequence04:54112..54294(+)	partial			WP_021723153.1	hypothetical protein	55.0	28.4	78.8
MGA_404	LOCUS_04010	sequence04:61138..61428(-)	partial			WP_011836746.1	accessory Sec system glycosyltransferase GtfA	100.0	19.2	57.7
MGA_454	LOCUS_04510	sequence05:49015..49215(-)	partial			WP_003131461.1	PspC domain-containing protein	97.0	41.6	62.5
MGA_456	LOCUS_04530	sequence05:50490..51992(-)	partial			WP_165379804.1	amidase domain-containing protein	62.0	64.3	58.1
MGA_462	LOCUS_04590	sequence05:58900..59391(-)	partial			WP_002384134.1	YcjF family protein	83.4	59.0	37.5
MGA_463	LOCUS_04600	sequence05:59767..60303(+)	internal_stop_codon	60301..60303(+)		WP_012544973.1	IS110 family transposase	93.8	40.8	32.4
MGA_464	LOCUS_04610	sequence05:60358..60927(+)	internal_stop_codon	60301..60303(+)		WP_011015895.1	IS110-like element ISFnu4 family transposase	95.8	46.5	40.7
MGA_465	LOCUS_04620	sequence05:61111..62646(-)	partial			WP_010990081.1	class 1 internalin InlJ	73.2	41.6	35.0
MGA_473	LOCUS_04700	sequence06:6481..7455(-)	partial			WP_010922618.1	CHAP domain-containing protein	41.7	26.4	59.3
MGA_482	LOCUS_04790	sequence06:17214..18323(-)	partial			WP_010906038.1	hypothetical protein	89.2	20.6	32.9
MGA_493	LOCUS_04900	sequence06:27647..28321(-)	partial			WP_010906040.1	WxL domain-containing protein	82.1	69.4	47.8
MGA_559	LOCUS_05560	sequence08:83..1051(+)	partial			WP_003548819.1	LTA synthase family protein	95.7	33.2	28.1
MGA_562	LOCUS_05590	sequence08:2817..4508(+)	partial			WP_003242495.1	bifunctional lysylphosphatidylglycerol flippase/synthetase MprF	83.3	51.5	26.6
MGA_584	LOCUS_05810	sequence08:25163..25360(+)	partial			WP_002355534.1	1-phosphofructokinase	84.6	17.9	72.7
MGA_585	LOCUS_05820	sequence08:25344..25823(+)	partial			WP_010905540.1	HAD family phosphatase	95.6	68.5	46.1
MGA_615	LOCUS_06110	sequence09:8068..9228(-)	partial			WP_011108305.1	family 20 glycosylhydrolase	50.3	31.6	25.8
MGA_622	LOCUS_06180	sequence09:13989..14204(-)	partial			WP_010906291.1	DUF1048 domain-containing protein	95.8	64.5	42.0
MGA_631	LOCUS_06270	sequence09:21162..21587(-)	partial			WP_003129531.1	DUF948 domain-containing protein	67.4	69.1	70.4
MGA_644	LOCUS_06400	sequence09:31204..31806(-)	partial			WP_021036818.1	L-threonylcarbamoyladenylate synthase	97.5	63.7	70.8
MGA_653	LOCUS_06490	sequence09:37350..38213(-)	partial			WP_011101160.1	bacterial Ig-like domain-containing protein	39.0	5.1	34.8
MGA_659	LOCUS_06550	sequence09:41193..41465(-)	partial			WP_003640632.1	Spx/MgsR family RNA polymerase-binding regulatory protein	94.4	61.7	37.6
MGA_668	LOCUS_06640	sequence10:8661..9233(-)	partial			WP_010906169.1	hypothetical protein	94.7	47.8	63.4
MGA_673	LOCUS_06690	sequence10:12046..12441(-)	partial			WP_003437036.1	response regulator transcription factor	96.9	54.3	68.5
MGA_685	LOCUS_06810	sequence10:24398..25444(-)	partial			WP_002383740.1	aminoacyltransferase	67.8	55.2	29.8
MGA_694	LOCUS_06900	sequence10:32948..33604(-)	internal_stop_codon	33791..33793(-)		WP_010990053.1	sugar phosphorylase	96.8	38.2	50.0
MGA_695	LOCUS_06910	sequence10:33791..34603(-)	internal_stop_codon	33791..33793(-)		WP_010990053.1	sugar phosphorylase	85.6	41.4	60.8
MGA_697	LOCUS_06930	sequence10:37212..38573(-)	partial			WP_010990051.1	fructose-specific PTS transporter subunit EIIC	97.4	67.5	53.6
MGA_704	LOCUS_07000	sequence11:5338..6375(-)	partial			WP_000156404.1	SGNH/GDSL hydrolase family protein	72.2	40.0	44.8
MGA_734	LOCUS_07300	sequence11:27618..28355(-)	partial			WP_011475627.1	phage replisome organizer N-terminal domain-containing protein	41.2	34.9	40.0
MGA_748	LOCUS_07430	sequence12:2752..4893(-)	partial			WP_004398589.1	PBP1A family penicillin-binding protein	77.1	58.9	28.7
MGA_826	LOCUS_08210	sequence12:83275..84000(-)	frameshift		84191	WP_153495214.1	IS3 family transposase	100.0	52.7	73.4
MGA_827	LOCUS_08220	sequence12:84072..84671(-)	frameshift		84098	WP_141741171.1	IS3 family transposase	88.4	37.0	49.7
MGA_844	LOCUS_08390	sequence12:105203..105451(+)	partial			WP_003130332.1	MGMT family protein	90.2	73.3	54.1
MGA_857	LOCUS_08520	sequence12:125368..125961(+)	partial			WP_000387350.1	helix-hairpin-helix domain-containing protein	75.1	70.3	54.7
MGA_858	LOCUS_08530	sequence12:127159..128124(+)	frameshift		127036	WP_011836678.1	DNA internalization-related competence protein ComEC/Rec2	100.0	42.8	49.8
MGA_919	LOCUS_09140	sequence12:185655..186179(+)	frameshift		186023	WP_010906110.1	competence protein CoiA	73.6	39.5	56.9
MGA_920	LOCUS_09150	sequence12:186176..186661(+)	frameshift		186023	WP_010906110.1	competence protein CoiA	95.0	46.5	40.5
MGA_929	LOCUS_09240	sequence13:5995..6627(+)	partial			WP_011837300.1	helix-turn-helix transcriptional regulator	39.0	42.1	38.6
MGA_952	LOCUS_09470	sequence13:24300..25460(+)	partial			WP_000762954.1	DUF262 domain-containing protein	41.7	25.7	33.9
MGA_960	LOCUS_09540	sequence14:2818..3639(+)	frameshift		3633	WP_011071157.1	S8 family serine peptidase	93.8	35.4	35.1
MGA_975	LOCUS_09690	sequence14:14658..15698(+)	frameshift		15689	WP_209021411.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	96.8	46.1	41.5
MGA_976	LOCUS_09700	sequence14:15682..16608(+)	frameshift		15689	WP_209021411.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	98.4	41.7	33.0
MGA_1000	LOCUS_09930	sequence15:18698..20281(-)	internal_stop_codon	20375..20377(-)		WP_011861581.1	alpha-amylase family glycosyl hydrolase	99.4	79.9	58.0
MGA_1001	LOCUS_09940	sequence15:20375..20641(-)	internal_stop_codon	20375..20377(-)		WP_005787605.1	alpha amylase C-terminal domain-containing protein	96.6	12.8	44.8
MGA_1060	LOCUS_10510	sequence18:1414..1836(-)	partial			WP_002302683.1	MarR family transcriptional regulator	78.6	71.4	49.1
MGA_1070	LOCUS_10610	sequence18:10860..12992(-)	partial			WP_010905858.1	glycosyltransferase	68.2	58.7	52.4
MGA_1081	LOCUS_10720	sequence18:24238..>25245(-)	partial			WP_011109597.1	Ig-like domain-containing protein	91.9	17.1	45.3
MGA_1099	LOCUS_10900	sequence20:381..902(-)	frameshift		413	WP_011837294.1	DUF6287 domain-containing protein	47.4	17.8	36.6
MGA_1129	LOCUS_11190	sequence21:7592..8350(+)	partial			WP_010963358.1	YiiX/YebB-like N1pC/P60 family cysteine hydrolase	60.7	62.7	37.7
MGA_1142	LOCUS_11320	sequence22:1496..2836(-)	partial			WP_011254008.1	Rep family protein	63.2	83.7	23.9
MGA_1200	LOCUS_11900	sequence23:30232..30594(-)	partial			WP_226319344.1	competence type IV pilus minor pilin ComGD	84.2	70.6	44.6
MGA_1205	LOCUS_11950	sequence23:33004..33180(-)	partial			WP_003129844.1	30S ribosomal protein S21	74.1	74.1	97.7
MGA_1207	LOCUS_11970	sequence23:34953..36407(+)	partial			WP_011674023.1	GW dipeptide domain-containing protein	46.3	21.9	38.8
MGA_1223	LOCUS_12130	sequence23:53732..54118(-)	partial			WP_002899995.1	DUF2142 domain-containing protein	89.1	25.1	30.7
MGA_1234	LOCUS_12240	sequence23:62619..63140(+)	frameshift		63419,63119	WP_010905210.1	glycosyltransferase family 4 protein	97.1	43.5	55.4
MGA_1235	LOCUS_12250	sequence23:63161..63424(+)	frameshift		63419,63119	WP_010905210.1	glycosyltransferase family 4 protein	92.0	21.1	57.5
MGA_1317	LOCUS_13070	sequence24:2876..3109(+)	frameshift		2849	WP_003721726.1	DUF2200 domain-containing protein	93.5	67.2	57.0
MGA_1334	LOCUS_13240	sequence25:10075..10824(-)	partial			WP_010905870.1	glutamate decarboxylase	96.4	51.5	89.2
MGA_1336	LOCUS_13260	sequence25:11622..11909(+)	partial			WP_010989580.1	MarR family winged helix-turn-helix transcriptional regulator	100.0	63.3	46.3
MGA_1353	LOCUS_13420	sequence27:2334..3071(+)	partial			WP_011102239.1	helix-turn-helix domain-containing protein	98.4	74.4	41.2
MGA_1364	LOCUS_13510	sequence28:1171..3345(+)	partial			WP_010989422.1	MucBP domain-containing protein	80.4	41.1	33.2
MGA_1365	LOCUS_13520	sequence28:3693..3884(+)	frameshift		3699	WP_010753174.1	tyrosine-type recombinase/integrase	95.2	19.3	63.3
MGA_1376	LOCUS_13630	sequence29:4913..5635(-)	partial			WP_012582623.1	ParB/RepB/Spo0J family partition protein	66.7	65.1	28.1
MGA_1383	LOCUS_13700	sequence30:19..399(-)	partial			WP_009891460.1	PRD domain-containing protein	97.6	43.0	53.7
MGA_1386	LOCUS_13730	sequence30:3514..4056(-)	internal_stop_codon	4096..4098(-)		WP_002371849.1	N-acetylglucosamine-specific PTS transporter subunit IIBC	93.3	26.0	56.6
MGA_1387	LOCUS_13740	sequence30:4096..5481(-)	internal_stop_codon	4096..4098(-)		WP_002371849.1	N-acetylglucosamine-specific PTS transporter subunit IIBC	100.0	70.1	63.3
MGA_1417	LOCUS_14010	sequence33:2046..2591(-)	partial			WP_010905634.1	CDP-glycerol glycerophosphotransferase family protein	99.4	45.6	63.3
MGA_1418	LOCUS_14020	sequence33:3231..3872(-)	partial			WP_003131432.1	ATP-binding cassette domain-containing protein	95.8	44.2	75.2
MGA_1420	LOCUS_14040	sequence33:4316..4669(+)	partial			WP_001031454.1	XRE family transcriptional regulator	82.1	43.0	48.0
MGA_1427	LOCUS_14110	sequence34:2800..4191(+)	partial			WP_003244531.1	beta-glucanase	14.7	30.2	41.1
MGA_1459	LOCUS_14430	sequence34:31934..32194(+)	partial			WP_010905055.1	Rha family transcriptional regulator	95.3	39.0	36.5
MGA_1500	LOCUS_14840	sequence34:70497..71036(+)	partial			WP_012775474.1	folate family ECF transporter S component	74.9	73.8	32.6
MGA_1553	LOCUS_15340	sequence37:560..1561(+)	partial			WP_010880827.1	ATP-dependent Clp protease ATP-binding subunit	68.5	29.8	36.1
MGA_1555	LOCUS_15360	sequence37:3000..3869(-)	frameshift		3910	WP_165992825.1	IS3 family transposase	99.0	75.1	68.2
MGA_1556	LOCUS_15370	sequence37:3866..4141(-)	frameshift		3910	WP_165992825.1	IS3 family transposase	90.1	21.5	92.7
MGA_1561	LOCUS_15410	sequence38:2802..2927(+)	frameshift,internal_stop_codon	2925..2927(+)	3032	WP_165992825.1	IS3 family transposase	100.0	10.8	92.7
MGA_1564	LOCUS_15430	sequence39:347..2383(+)	partial			WP_000216486.1	prophage tail fiber N-terminal domain-containing protein	38.2	28.2	26.8
MGA_1570	LOCUS_15470	sequence41:1548..1859(+)	partial			WP_109289924.1	IS3 family transposase	98.1	22.5	60.4
MGA_1572	LOCUS_15490	sequence42:1016..1444(+)	partial			WP_010905262.1	polysaccharide deacetylase family protein	99.3	37.9	68.1
MGA_1583	LOCUS_15580	sequence45:2793..2990(-)	partial			WP_213533719.1	PTS sugar transporter subunit IIC	92.3	14.0	44.6
MGA_1685	LOCUS_16580	sequence47:314..913(-)	frameshift		1010	WP_165992825.1	IS3 family transposase	98.5	51.4	66.8
MGA_1686	LOCUS_16590	sequence47:1181..1456(-)	frameshift		1225,1009	WP_165992825.1	IS3 family transposase	89.0	21.3	93.8
MGA_1692	LOCUS_16640	sequence51:138..395(-)	partial			WP_188367817.1	recombinase family protein	87.1	35.7	52.7
MGA_1695	LOCUS_16650	sequence53:122..388(-)	partial			WP_010774278.1	relaxase/mobilization nuclease domain-containing protein	90.9	13.2	51.2
MGA_1696	LOCUS_16660	sequence53:550..864(+)	partial			WP_003131629.1	recombinase RecA	100.0	28.4	58.2
MGA_1698	LOCUS_16670	sequence55:228..791(-)	frameshift		197,326	WP_153495214.1	IS3 family transposase	91.4	37.0	43.6
MGA_1708	LOCUS_16760	sequence56:6408..6812(-)	partial			WP_010989637.1	methylated-DNA--[protein]-cysteine S-methyltransferase	73.1	62.3	47.5
MGA_1709	LOCUS_16770	sequence56:6802..7311(-)	partial			WP_013843861.1	trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase	93.5	43.2	38.3
MGA_1742	LOCUS_17100	sequence56:46995..49637(-)	partial			WP_002261981.1	LTA synthase family protein	72.2	74.2	40.0
MGA_1769	LOCUS_17370	sequence56:78751..83784(-)	partial			WP_010905155.1	SpaA isopeptide-forming pilin-related protein	20.8	16.1	29.1
MGA_1796	LOCUS_17560	sequence67:2888..3763(-)	partial			WP_012775167.1	cation diffusion facilitator family transporter	98.3	69.4	52.1
MGA_1803	LOCUS_17630	sequence67:8564..9253(+)	partial			WP_011674714.1	C39 family peptidase	65.1	42.3	43.2
MGA_1804	LOCUS_17640	sequence67:9897..10391(+)	frameshift,internal_stop_codon	9627..9629(+)	9801,9843,9883,9710	WP_010905971.1	site-specific integrase	98.8	45.1	82.1
MGA_1845	LOCUS_18050	sequence67:48376..49404(-)	partial			WP_002369211.1	glycerophosphodiester phosphodiesterase	95.0	54.0	41.1
MGA_1865	LOCUS_18250	sequence67:66784..67731(+)	partial			WP_003569257.1	magnesium transporter CorA family protein	74.3	74.9	26.1
MGA_1915	LOCUS_18730	sequence70:24191..24412(-)	partial			WP_010906243.1	MerR family transcriptional regulator	78.1	44.8	52.6
MGA_1960	LOCUS_19180	sequence70:67737..68501(-)	partial			WP_010965176.1	FtsK/SpoIIIE domain-containing protein	91.7	56.8	28.8
MGA_1966	LOCUS_19240	sequence70:71822..73018(+)	frameshift		73012	WP_209021411.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	99.5	55.4	45.3
MGA_1967	LOCUS_19250	sequence70:73027..73971(+)	frameshift		73012	WP_209021411.1	Dam family site-specific DNA-(adenine-N6)-methyltransferase	96.8	40.3	45.1
MGA_2000	LOCUS_19570	sequence71:36893..37576(-)	partial			WP_226319425.1	TIM44-like domain-containing protein	69.6	66.7	36.2
MGA_2025	LOCUS_19820	sequence71:59994..60686(-)	partial			WP_000725225.1	CHAP domain-containing protein	41.3	38.4	43.9
MGA_2026	LOCUS_19830	sequence71:60726..61190(-)	internal_stop_codon	60726..60728(-)		WP_010906400.1	CHAP domain-containing protein	100.0	33.6	50.0
MGA_2038	LOCUS_19950	sequence71:69866..71101(-)	partial			WP_000301254.1	recombinase family protein	72.7	57.4	45.5
