{ "type": "genome", "identifier": "GCF_002441765.1", "organism": "Lactococcus cremoris", "title": "Lactococcus cremoris", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Inner Mongolia Agricultural University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002441765.1", "bioproject": "PRJNA224116", "biosample": "SAMN03267155", "wgs_master": "JXJZ00000000.1", "refseq_category": "na", "taxid": "1359", "species_taxid": "1359", "organism_name": "Lactococcus cremoris", "infraspecific_name": "strain=ATCC 19257", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/10/04", "asm_name": "ASM244176v1", "asm_submitter": "Inner Mongolia Agricultural University", "gbrs_paired_asm": "GCA_002441765.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/441/765/GCF_002441765.1_ASM244176v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2323200", "genome_size_ungapped": "2322910", "gc_percent": "35.500000", "replicon_count": "0", "scaffold_count": "226", "contig_count": "226", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-01-29", "total_gene_count": "2441", "protein_coding_gene_count": "2232", "non_coding_gene_count": "47", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-10-04", "dateModified": "2017-10-04", "datePublished": "2017-10-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Lactococcus cremoris" ], "sample_taxid": [ "1359" ], "sample_host_organism": [ "missing" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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665, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Lactococcus cremoris", "strain": "strain=ATCC 19257", "accession": "GCA_004354515.1", "taxid": 1359, "species_taxid": 1359, "relation_to_type": "type", "validated": true, "ani": 99.9854, "matched_fragments": 655, "total_fragments": 665, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Lactococcus cremoris", "strain": "strain=LMG6897", "accession": "GCA_001622295.1", "taxid": 1359, "species_taxid": 1359, "relation_to_type": "type", "validated": true, "ani": 99.9716, "matched_fragments": 653, "total_fragments": 665, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Lactococcus cremoris subsp. cremoris", "strain": "strain=NBRC 100676", "accession": "GCA_001591705.1", "taxid": 2816960, "species_taxid": 1359, "relation_to_type": "type", "validated": true, "ani": 99.2833, "matched_fragments": 616, "total_fragments": 665, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Lactococcus cremoris subsp. tructae", "strain": "strain=DSM 21502", "accession": "GCA_002441825.1", "taxid": 542833, "species_taxid": 1359, "relation_to_type": "type", "validated": true, "ani": 97.889, "matched_fragments": 590, "total_fragments": 665, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Lactococcus lactis subsp. hordniae", "strain": "strain=NBRC 100931", "accession": "GCA_001591725.1", "taxid": 203404, "species_taxid": 1358, "relation_to_type": "type", "validated": true, "ani": 87.4528, "matched_fragments": 505, "total_fragments": 665, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lactococcus lactis subsp. hordniae", "strain": "strain=CCUG 32210T", "accession": "GCA_008692945.1", "taxid": 203404, "species_taxid": 1358, "relation_to_type": "type", "validated": true, "ani": 87.3764, "matched_fragments": 515, "total_fragments": 665, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lactococcus lactis subsp. hordniae", "strain": "strain=DSM 20450", "accession": "GCA_002441785.1", "taxid": 203404, "species_taxid": 1358, "relation_to_type": "type", "validated": true, "ani": 87.3103, "matched_fragments": 508, "total_fragments": 665, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lactococcus paracarnosus", "strain": "strain=TMW 2.1615", "accession": "GCA_006770285.1", "taxid": 2749962, "species_taxid": 2749962, "relation_to_type": "type", "validated": true, "ani": 76.9598, "matched_fragments": 53, "total_fragments": 665, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lactococcus carnosus", "strain": "strain=TMW 2.1612", "accession": "GCA_006770265.1", "taxid": 2749961, "species_taxid": 2749961, "relation_to_type": "type", "validated": true, "ani": 76.707, "matched_fragments": 51, "total_fragments": 665, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 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