<?xml version="1.0" ?>
<BioSampleSet><BioSample access="public" publication_date="2017-05-10T00:00:00.000" last_update="2021-02-28T04:19:52.900" submission_date="2017-05-10T01:43:14.366" id="6924978" accession="SAMN06924978">   <Ids>     <Id db="BioSample" is_primary="1">SAMN06924978</Id>     <Id db_label="Sample name">Alteromonas sp. strain 5.12</Id>   </Ids>   <Description>     <Title>MIGS Cultured Bacterial/Archaeal sample from Alteromonas pelagimontana</Title>     <Organism taxonomy_id="1858656" taxonomy_name="Alteromonas pelagimontana">       <OrganismName>Alteromonas pelagimontana</OrganismName>     </Organism>     <Comment>       <Paragraph>Keywords: GSC:MIxS;MIGS:6.0</Paragraph>     </Comment>   </Description>   <Owner>     <Name url="https://www.ncaor.gov.in/">NCAOR</Name>     <Contacts>       <Contact>         <Name>           <First>Rupesh</First>           <Last>Sinha</Last>           <Middle>Kumar</Middle>         </Name>       </Contact>     </Contacts>   </Owner>   <Models>     <Model>MIGS.ba</Model>   </Models>   <Package display_name="MIGS: cultured bacteria/archaea; version 6.0">MIGS.ba.6.0</Package>   <Attributes>     <Attribute attribute_name="strain" harmonized_name="strain" display_name="strain">5.12</Attribute>     <Attribute attribute_name="isolation_source" harmonized_name="isolation_source" display_name="isolation source">sediment</Attribute>     <Attribute attribute_name="collection_date" harmonized_name="collection_date" display_name="collection date">2015-11-13</Attribute>     <Attribute attribute_name="geo_loc_name" harmonized_name="geo_loc_name" display_name="geographic location">Indian Ocean</Attribute>     <Attribute attribute_name="sample_type" harmonized_name="sample_type" display_name="sample type">bacterial species</Attribute>     <Attribute attribute_name="type-material">type strain of Alteromonas pelagimontana</Attribute>     <Attribute attribute_name="Gram stain">Negative</Attribute>     <Attribute attribute_name="Motility">Motile</Attribute>     <Attribute attribute_name="Temperature" harmonized_name="temp" display_name="temperature">5–40 °C (optimum at 35 °C)</Attribute>     <Attribute attribute_name="Salinity" harmonized_name="salinity" display_name="salinity">0–10% (optimum at 3.5%)</Attribute>     <Attribute attribute_name="pH range">6.0 to 10.0 (optimum 6.0)</Attribute>     <Attribute attribute_name="Cell shape">Short rods</Attribute>     <Attribute attribute_name="Colony color">Pale yellow</Attribute>     <Attribute attribute_name="Submitted_to_NCBI">CP052766</Attribute>     <Attribute attribute_name="Investigation_type" harmonized_name="investigation_type" display_name="investigation type">bacteria_archaea</Attribute>     <Attribute attribute_name="Project_name" harmonized_name="project_name" display_name="project name">Complete genome sequence of Alteromonas pelagimontana 5.12</Attribute>     <Attribute attribute_name="lat_lon" harmonized_name="lat_lon" display_name="latitude and longitude">26.76 S 67.71 E</Attribute>     <Attribute attribute_name="Env_biome" harmonized_name="env_broad_scale" display_name="broad-scale environmental context">marine benthic biome [ENVO:01000024]</Attribute>     <Attribute attribute_name="Env_feature" harmonized_name="env_local_scale" display_name="local-scale environmental context">marine sediment [ENVO:03000033]</Attribute>     <Attribute attribute_name="Env_material" harmonized_name="env_medium" display_name="environmental medium">deep marine sediment [ENVO:00002113]</Attribute>     <Attribute attribute_name="Env_package" harmonized_name="env_package" display_name="environmental package">Sediment</Attribute>     <Attribute attribute_name="Depth" harmonized_name="depth" display_name="depth">2681 m</Attribute>     <Attribute attribute_name="Elev" harmonized_name="elev" display_name="elevation">2681 m</Attribute>     <Attribute attribute_name="Num_replicons" harmonized_name="num_replicons" display_name="number of replicons">1</Attribute>     <Attribute attribute_name="Biotic_relationship" harmonized_name="biotic_relationship" display_name="observed biotic relationship">free living</Attribute>     <Attribute attribute_name="Trophic_level" harmonized_name="trophic_level" display_name="trophic level">heterotroph</Attribute>     <Attribute attribute_name="Samp_collect_device" harmonized_name="samp_collect_device" display_name="sample collection device or method">Sediment grab sampler</Attribute>     <Attribute attribute_name="Seq_meth">Illumina Miseq and Minion Oxford Nanopore</Attribute>     <Attribute attribute_name="Lib_const_meth">Paired-end</Attribute>     <Attribute attribute_name="Assembly method">Hybrid assembly of Illumina MiSeq and Minion Oxford Nanopore reads</Attribute>     <Attribute attribute_name="Assembly_name">MaSuRCA v. 3.2.8</Attribute>     <Attribute attribute_name="Finishing_strategy">Complete; over 100 fold genome coverage; 1 contig</Attribute>     <Attribute attribute_name="isol_growth_condt" harmonized_name="isol_growth_condt" display_name="isolation and growth condition">PMID: 28905702</Attribute>     <Attribute attribute_name="ref_biomaterial" harmonized_name="ref_biomaterial" display_name="reference for biomaterial">PMID: 28905702</Attribute>   </Attributes>   <Links>     <Link type="entrez" target="bioproject" label="PRJNA386068">386068</Link>   </Links>   <Status status="live" when="2017-05-10T09:55:19.828"/> </BioSample> </BioSampleSet>
