{ "type": "genome", "identifier": "GCF_002563715.1", "organism": "Isoptericola jiangsuensis", "title": "Isoptericola jiangsuensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002563715.1", "bioproject": "PRJNA224116", "biosample": "SAMN04488560", "wgs_master": "PDJJ00000000.1", "refseq_category": "reference genome", "taxid": "548579", "species_taxid": "548579", "organism_name": "Isoptericola jiangsuensis", "infraspecific_name": "strain=DSM 21863", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/10/17", "asm_name": "ASM256371v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_002563715.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/563/715/GCF_002563715.1_ASM256371v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4041252", "genome_size_ungapped": "4041252", "gc_percent": "74.000000", "replicon_count": "0", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002563715.1-RS_2024_05_03", "annotation_date": "2024-05-03", "total_gene_count": "3611", "protein_coding_gene_count": "3524", "non_coding_gene_count": "65", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-10-17", "dateModified": "2017-10-17", "datePublished": "2017-10-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Isoptericola jiangsuensis" ], "sample_taxid": [ "548579" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"below_threshold" }, { "organism_name": "Promicromonospora citrea", "strain": "strain=ATCC 15908", "accession": "GCA_013004695.1", "taxid": 43677, "species_taxid": 43677, "relation_to_type": "type", "validated": true, "ani": 80.1374, "matched_fragments": 690, "total_fragments": 1347, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulosimicrobium funkei", "strain": "strain=NBRC 104118", "accession": "GCA_001570825.1", "taxid": 264251, "species_taxid": 264251, "relation_to_type": "suspected-type", "validated": true, "ani": 80.1241, "matched_fragments": 701, "total_fragments": 1347, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Promicromonospora citrea", "strain": "strain=JCM 3051", "accession": "GCA_014647735.1", "taxid": 43677, "species_taxid": 43677, "relation_to_type": "type", "validated": true, "ani": 80.0433, "matched_fragments": 730, "total_fragments": 1347, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulosimicrobium funkei", "strain": "strain=JCM 14302", "accession": "GCA_004519295.1", "taxid": 264251, "species_taxid": 264251, "relation_to_type": "suspected-type", "validated": true, "ani": 80.028, "matched_fragments": 730, "total_fragments": 1347, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Promicromonospora sukumoe", "strain": "strain=DSM 44121", "accession": "GCA_014137995.1", "taxid": 88382, "species_taxid": 88382, "relation_to_type": "type", "validated": true, "ani": 79.9752, "matched_fragments": 751, "total_fragments": 1347, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oerskovia douganii", "strain": "strain=Sa1BUA8", "accession": "GCA_015142735.1", "taxid": 2762210, "species_taxid": 2762210, "relation_to_type": "type", "validated": true, "ani": 79.5502, "matched_fragments": 595, "total_fragments": 1347, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oerskovia rustica", "strain": 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2608402, "species_taxid": 2608402, "relation_to_type": "type", "validated": true, "ani": 79.0017, "matched_fragments": 610, "total_fragments": 1347, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas hominis", "strain": "strain=DSM 9581", "accession": "GCA_014201095.1", "taxid": 156981, "species_taxid": 156981, "relation_to_type": "suspected-type", "validated": true, "ani": 78.8909, "matched_fragments": 619, "total_fragments": 1347, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas hominis", "strain": "strain=NBRC 16055", "accession": "GCA_007989225.1", "taxid": 156981, "species_taxid": 156981, "relation_to_type": "suspected-type", "validated": true, "ani": 78.8329, "matched_fragments": 591, "total_fragments": 1347, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas avistercoris", "strain": "strain=Sa3CUA2", "accession": "GCA_014836445.1", "taxid": 2762242, "species_taxid": 2762242, 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