# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_8	LOCUS_00080	sequence001:4834..5238(+)	partial			WP_003417421.1	PDZ-interacting protease regulator Ppr1	75.4	35.9	43.6
MGA_14	LOCUS_00140	sequence001:13130..13546(+)	partial			WP_053240498.1	CBS domain-containing protein	68.1	67.6	36.1
MGA_16	LOCUS_00160	sequence001:14836..15612(-)	partial			WP_004453954.1	class II aldolase/adducin family protein	74.4	84.3	26.0
MGA_24	LOCUS_00240	sequence001:24243..25472(-)	partial			WP_005114807.1	divalent metal cation transporter	82.2	61.2	34.5
MGA_27	LOCUS_00270	sequence001:27074..32128(-)	partial			WP_003916655.1	PPE domain-containing protein	94.5	49.4	24.2
MGA_30	LOCUS_00300	sequence001:34370..35017(-)	internal_stop_codon	35018..35020(-)		WP_014877502.1	Tex family protein	67.4	18.1	84.8
MGA_31	LOCUS_00310	sequence001:35018..35731(-)	frameshift,internal_stop_codon	35017..35019(-)	35730	WP_012296438.1	Tex family protein	100.0	30.1	78.9
MGA_32	LOCUS_00320	sequence001:35671..36408(-)	frameshift		35730	WP_012296438.1	Tex family protein	93.5	28.7	71.6
MGA_36	LOCUS_00360	sequence001:40037..40888(-)	frameshift		40964,40798,40734	WP_003898998.1	serine/threonine protein kinase PknE	96.5	47.5	55.6
MGA_37	LOCUS_00370	sequence001:40935..41225(-)	frameshift		41235,40964,40773,41302,40798	WP_003898998.1	serine/threonine protein kinase PknE	90.6	15.4	80.5
MGA_38	LOCUS_00380	sequence001:41300..41530(-)	frameshift		41689,41234,41301,41535	WP_003898998.1	serine/threonine protein kinase PknE	100.0	14.1	80.0
MGA_39	LOCUS_00390	sequence001:41470..41673(-)	frameshift		41689,41234,41301,41535	WP_003898998.1	serine/threonine protein kinase PknE	67.2	8.0	91.1
MGA_41	LOCUS_00410	sequence001:42685..44235(-)	internal_stop_codon	42685..42687(-),42613..42615(-)		WP_011729139.1	MFS transporter	93.8	77.4	73.6
MGA_45	LOCUS_00450	sequence001:48883..49791(+)	frameshift		49671	WP_003414172.1	DUF2293 domain-containing protein	94.4	81.3	66.3
MGA_46	LOCUS_00460	sequence001:50012..50386(-)	frameshift		50068	WP_013226547.1	pyridoxamine 5'-phosphate oxidase family protein	83.1	62.2	47.1
MGA_48	LOCUS_00480	sequence001:53123..54250(-)	partial			WP_010886110.1	serine/threonine protein kinase PknH	52.3	31.0	51.0
MGA_60	LOCUS_00600	sequence001:72502..72840(+)	frameshift		72768	WP_003900593.1	serine/threonine protein kinase PknI	61.6	10.9	44.9
MGA_62	LOCUS_00620	sequence001:73134..74090(-)	partial			WP_011728927.1	RDD family protein	42.8	82.6	52.9
MGA_63	LOCUS_00630	sequence001:74472..77153(-)	partial			WP_011144339.1	NB-ARC domain-containing protein	69.3	49.6	47.8
MGA_64	LOCUS_00640	sequence001:77159..78946(-)	partial			WP_011144339.1	NB-ARC domain-containing protein	91.9	40.8	40.6
MGA_75	LOCUS_00740	sequence001:85394..85633(+)	internal_stop_codon	85631..85633(+)		WP_003900449.1	type II toxin-antitoxin system RelE/ParE family toxin	93.7	36.3	52.7
MGA_76	LOCUS_00750	sequence001:85801..86109(+)	partial			WP_034284194.1	helix-turn-helix domain-containing protein	87.3	73.3	42.7
MGA_77	LOCUS_00760	sequence001:86578..87114(+)	partial			WP_003411901.1	helix-turn-helix domain-containing protein	50.0	78.1	79.8
MGA_78	LOCUS_00770	sequence001:87127..87702(+)	partial			WP_013383033.1	PIN domain-containing protein	74.3	72.7	34.3
MGA_97	LOCUS_00960	sequence001:104782..105099(+)	frameshift		105360,105081	WP_003898980.1	PPE family protein	95.2	25.6	64.4
MGA_98	LOCUS_00970	sequence001:105099..105377(+)	frameshift		105360,105081,105634,105615	WP_003898980.1	PPE family protein	94.6	26.6	45.7
MGA_134	LOCUS_01330	sequence001:146962..147198(-)	partial			WP_003900391.1	DivIVA domain-containing protein	97.4	24.9	61.8
MGA_158	LOCUS_01570	sequence001:189167..190282(-)	partial			WP_003900384.1	PE family protein	39.6	47.1	54.4
MGA_168	LOCUS_01670	sequence001:200049..201761(+)	partial			WP_003911027.1	PE family protein	20.4	26.4	67.2
MGA_179	LOCUS_01770	sequence001:214917..215483(+)	partial			WP_037392208.1	DNA ligase D	80.9	19.3	41.5
MGA_180	LOCUS_01780	sequence001:215555..215974(+)	internal_stop_codon	215972..215974(+)		WP_014877829.1	hypothetical protein	97.8	82.4	44.7
MGA_207	LOCUS_02050	sequence001:257199..257603(-)	partial			WP_003408004.1	TM2 domain-containing protein	79.9	70.5	82.2
MGA_208	LOCUS_02060	sequence001:257668..259506(-)	partial			WP_003408002.1	prolipoprotein diacylglyceryl transferase	46.2	60.5	74.6
MGA_214	LOCUS_02120	sequence001:264935..265996(-)	partial			WP_010950590.1	PPE family protein	92.9	30.4	28.2
MGA_237	LOCUS_02350	sequence001:288652..288870(+)	frameshift		288666,288606	WP_005087553.1	hypothetical protein	93.1	54.9	61.2
MGA_238	LOCUS_02360	sequence001:289069..289320(+)	frameshift,internal_stop_codon	289318..289320(+)	289121	WP_011731325.1	hypothetical protein	61.4	10.9	64.7
MGA_239	LOCUS_02370	sequence001:289619..290014(+)	frameshift,internal_stop_codon	290012..290014(+)	289608,290074	WP_005084962.1	hypothetical protein	90.1	25.6	65.3
MGA_240	LOCUS_02380	sequence001:290059..290214(+)	frameshift,internal_stop_codon	290012..290014(+)	290074	WP_011731325.1	hypothetical protein	90.2	10.7	80.4
MGA_246	LOCUS_02440	sequence001:294707..295426(+)	partial			WP_003407798.1	NlpC/P60 family peptidoglycan-binding protein RipD	66.9	69.6	83.8
MGA_253	LOCUS_02510	sequence001:306051..306971(-)	partial			WP_010887996.1	phosphatase PAP2 family protein	67.6	77.3	34.1
MGA_259	LOCUS_02570	sequence001:313055..313579(+)	partial			WP_009938577.1	hypothetical protein	39.7	51.5	88.4
MGA_274	LOCUS_02710	sequence001:329875..330264(-)	frameshift		330266	WP_013528639.1	RNA polymerase sigma factor	96.1	30.2	45.2
MGA_275	LOCUS_02720	sequence001:330264..330980(-)	frameshift		330266	WP_013528639.1	RNA polymerase sigma factor	52.9	31.2	40.7
MGA_306	LOCUS_03030	sequence001:376846..377748(-)	partial			WP_004535171.1	CDP-glucose 4,6-dehydratase	88.3	74.8	47.4
MGA_311	LOCUS_03080	sequence001:381211..382746(+)	partial			WP_000582619.1	N-acetylneuraminate synthase family protein	58.1	39.2	29.2
MGA_314	LOCUS_03110	sequence001:384811..385341(+)	partial			WP_011337538.1	phosphoglycolate phosphatase	75.0	57.6	37.1
MGA_316	LOCUS_03130	sequence001:386537..387487(+)	partial			WP_017276633.1	FkbM family methyltransferase	57.6	74.2	28.8
MGA_318	LOCUS_03150	sequence001:388946..390397(-)	frameshift		390458	WP_003898905.1	glycosyltransferase 87 family protein	97.5	78.6	51.4
MGA_321	LOCUS_03180	sequence001:393513..394979(-)	partial			WP_010941286.1	glycosyltransferase family 2 protein	43.4	64.9	33.2
MGA_334	LOCUS_03310	sequence001:408922..409251(+)	partial			WP_003899407.1	metalloregulator ArsR/SmtB family transcription factor	81.7	68.3	74.2
MGA_336	LOCUS_03330	sequence001:410324..410740(+)	frameshift		410312	WP_003413686.1	ACR3 family arsenite efflux transporter	97.8	27.1	74.8
MGA_337	LOCUS_03340	sequence001:410899..411891(-)	partial			WP_013225439.1	HAMP domain-containing sensor histidine kinase	77.9	56.5	37.4
MGA_342	LOCUS_03380	sequence001:415473..415952(+)	partial			WP_005090395.1	nitroreductase family deazaflavin-dependent oxidoreductase	71.7	71.5	42.1
MGA_364	LOCUS_03600	sequence001:438615..439715(+)	internal_stop_codon	439713..439715(+)		WP_003407494.1	PE family protein	35.5	36.2	57.5
MGA_381	LOCUS_03770	sequence001:457556..457816(+)	partial			WP_003891413.1	YbaB/EbfC family nucleoid-associated protein	89.5	70.0	41.6
MGA_391	LOCUS_03870	sequence001:470737..472152(+)	partial			WP_010886116.1	PE family protein	37.8	36.3	55.1
MGA_403	LOCUS_03990	sequence001:489740..490438(+)	frameshift		489722,490358	WP_010886130.1	HNH endonuclease signature motif containing protein	88.4	56.7	76.3
MGA_404	LOCUS_04000	sequence001:490374..490682(+)	frameshift		490357	WP_010886130.1	HNH endonuclease signature motif containing protein	97.1	27.1	71.7
MGA_468	LOCUS_04620	sequence001:560759..561208(+)	frameshift,internal_stop_codon	561206..561208(+)	561337	WP_003407292.1	class I SAM-dependent methyltransferase	96.6	52.6	73.6
MGA_480	LOCUS_04740	sequence001:573532..573849(-)	internal_stop_codon	574009..574011(-)		WP_003898857.1	integration host factor, actinobacterial type	100.0	55.3	85.7
MGA_481	LOCUS_04750	sequence001:574411..574812(-)	partial			WP_162139596.1	peptidylprolyl isomerase	62.4	31.6	45.3
MGA_499	LOCUS_04920	sequence001:592817..593800(+)	frameshift		592701,592797	WP_003412968.1	ERCC4 domain-containing protein	96.0	67.8	83.4
MGA_501	LOCUS_04940	sequence001:594030..594260(-)	frameshift		594322,594034	WP_011213333.1	enoyl-CoA hydratase-related protein	92.1	28.3	45.2
MGA_508	LOCUS_05000	sequence001:600377..601717(-)	partial			WP_011727435.1	FAD-dependent oxidoreductase	74.7	78.7	59.8
MGA_532	LOCUS_05240	sequence001:622697..623386(+)	internal_stop_codon	622490..622492(+)		WP_003911922.1	DUF2189 domain-containing protein	93.0	66.2	49.1
MGA_544	LOCUS_05360	sequence001:636389..637687(+)	internal_stop_codon	637685..637687(+)		WP_048066275.1	PKD domain-containing protein	67.1	17.5	46.2
MGA_546	LOCUS_05380	sequence001:638745..638996(-)	partial			WP_005082932.1	aldolase	98.8	30.6	76.8
MGA_548	LOCUS_05400	sequence001:639621..639992(-)	partial			WP_003413352.1	membrane protein	93.5	74.7	81.7
MGA_550	LOCUS_05420	sequence001:641243..641458(+)	partial			WP_005093082.1	RND family transporter	80.3	5.9	68.4
MGA_560	LOCUS_05520	sequence001:653154..654929(-)	partial			WP_003413385.1	protein translocase subunit SecD	66.5	67.9	84.0
MGA_561	LOCUS_05530	sequence001:655045..655422(-)	partial			WP_003413391.1	preprotein translocase subunit YajC	67.2	73.0	90.5
MGA_568	LOCUS_05600	sequence001:662742..664388(+)	partial			WP_010950748.1	PE family protein	27.6	27.5	66.2
MGA_581	LOCUS_05730	sequence001:675130..675735(+)	frameshift		675713,675716,675797,675722,675534,675710,675711	WP_014000186.1	PPE domain-containing protein	67.2	3.8	56.3
MGA_582	LOCUS_05740	sequence001:675725..675991(+)	frameshift		675710,675723,675534,675722	WP_003900088.1	PPE family protein	98.9	14.6	46.0
MGA_583	LOCUS_05750	sequence001:676148..676477(+)	frameshift,internal_stop_codon	676475..676477(+),675989..675991(+)	676567	WP_003407378.1	esterase PE16	100.0	20.6	47.7
MGA_584	LOCUS_05760	sequence001:676600..676953(+)	frameshift,internal_stop_codon	676475..676477(+)	676573	WP_003899395.1	PE-PPE domain-containing protein	100.0	18.4	55.1
MGA_591	LOCUS_05830	sequence001:683628..685235(+)	partial			WP_015039110.1	MmgE/PrpD family protein	62.8	74.2	24.3
MGA_600	LOCUS_05910	sequence001:690825..691139(+)	partial			WP_017264174.1	DUF2249 domain-containing protein	67.3	75.3	47.1
MGA_607	LOCUS_05970	sequence001:694866..695312(-)	partial			WP_003413588.1	helix-turn-helix domain-containing protein	100.0	66.5	69.8
MGA_631	LOCUS_06210	sequence001:717089..717337(+)	frameshift,internal_stop_codon	717052..717054(+)	717021,717087	WP_003899403.1	hypothetical protein	98.8	69.2	69.9
MGA_641	LOCUS_06310	sequence001:726511..727383(-)	partial			WP_011728464.1	3-carboxy-cis,cis-muconate cycloisomerase	82.8	58.2	46.9
MGA_643	LOCUS_06330	sequence001:727973..728590(-)	frameshift,internal_stop_codon	727973..727975(-)	728552	WP_011728462.1	protocatechuate 3,4-dioxygenase subunit beta	97.6	80.6	71.5
MGA_645	LOCUS_06350	sequence001:729564..729995(-)	partial			WP_003413625.1	non-heme di-iron catalase	37.8	33.5	59.3
MGA_650	LOCUS_06400	sequence001:735447..736457(-)	partial			WP_003814755.1	glycosyltransferase family 2 protein	68.5	77.3	46.8
MGA_653	LOCUS_06430	sequence001:737756..739657(-)	frameshift		738112,739757	WP_010950867.1	arylsulfatase AtsB	81.2	52.9	79.4
MGA_654	LOCUS_06440	sequence001:739584..740591(-)	frameshift		740590,739759	WP_003417213.1	arylsulfatase AtsB	85.7	29.6	70.4
MGA_655	LOCUS_06450	sequence001:740585..740743(-)	frameshift		740590	WP_003417213.1	arylsulfatase AtsB	98.1	5.3	58.8
MGA_660	LOCUS_06490	sequence001:743783..744367(-)	partial			WP_003410735.1	serine/threonine protein kinase PknJ	67.0	22.1	53.4
MGA_661	LOCUS_06500	sequence001:744263..744631(+)	partial			WP_003405202.1	fatty acyl-AMP ligase	75.4	17.8	75.3
MGA_664	LOCUS_06530	sequence001:748068..748535(+)	frameshift		748508	WP_011728985.1	DUF5994 family protein	83.2	77.2	60.5
MGA_668	LOCUS_06560	sequence001:750739..751359(-)	partial			WP_011728985.1	DUF5994 family protein	68.0	84.4	53.2
MGA_674	LOCUS_06620	sequence001:754717..755367(-)	frameshift		755338	WP_003414201.1	ExeA family protein	95.4	76.3	79.6
MGA_675	LOCUS_06630	sequence001:755524..755787(-)	frameshift		755813	WP_163760282.1	DDE-type integrase/transposase/recombinase	90.8	16.9	84.8
MGA_676	LOCUS_06640	sequence001:755766..756884(-)	frameshift		755813	WP_144956692.1	DDE-type integrase/transposase/recombinase	96.8	77.1	87.2
MGA_677	LOCUS_06650	sequence001:756933..757184(-)	internal_stop_codon	757224..757226(-)		WP_003414195.1	hypothetical protein	92.8	38.1	74.0
MGA_678	LOCUS_06660	sequence001:757224..757598(-)	internal_stop_codon	757224..757226(-)		WP_003414195.1	hypothetical protein	89.5	55.0	85.6
MGA_713	LOCUS_07010	sequence001:793315..793647(-)	partial			WP_003413930.1	dUTP diphosphatase	85.5	61.0	87.2
MGA_747	LOCUS_07350	sequence001:824739..826523(+)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	73.7	68.1	56.9
MGA_766	LOCUS_07540	sequence001:843099..843560(-)	frameshift		843146	WP_036462713.1	hypothetical protein	88.9	30.3	39.9
MGA_767	LOCUS_07550	sequence001:843721..844056(-)	frameshift,internal_stop_codon	844081..844083(-)	843834,844276	WP_036462713.1	hypothetical protein	69.4	16.9	54.5
MGA_774	LOCUS_07620	sequence001:849789..852053(-)	frameshift		852079	WP_012257687.1	type I restriction endonuclease subunit R	99.1	68.5	38.3
MGA_775	LOCUS_07630	sequence001:852005..852331(-)	frameshift		852296,852079	WP_010968692.1	type I restriction endonuclease subunit R	65.7	6.9	42.5
MGA_801	LOCUS_07890	sequence001:876784..877113(+)	partial			WP_011087308.1	VOC family protein	62.4	22.7	38.0
MGA_803	LOCUS_07910	sequence001:877662..877889(-)	partial			WP_010908387.1	flavodoxin family protein	86.7	43.0	78.5
MGA_827	LOCUS_08130	sequence001:901391..901729(-)	partial			WP_003414157.1	hypothetical protein	70.5	73.1	81.0
MGA_835	LOCUS_08200	sequence001:917980..920076(-)	partial			WP_184045897.1	type I-U CRISPR-associated protein Csx17	63.2	56.6	31.7
MGA_849	LOCUS_08340	sequence001:934178..937021(-)	partial			WP_003899505.1	translation initiation factor IF-2	66.4	69.9	93.8
MGA_866	LOCUS_08510	sequence001:955411..957366(+)	partial			WP_010886108.1	PE family protein	18.1	14.3	63.9
MGA_870	LOCUS_08550	sequence001:960804..961184(+)	partial			WP_011731112.1	WhiB family transcriptional regulator	72.2	77.1	76.9
MGA_893	LOCUS_08780	sequence001:981309..987836(-)	partial			WP_010950840.1	PPE family protein	9.2	29.9	49.0
MGA_898	LOCUS_08830	sequence001:991514..992926(+)	partial			WP_010886079.1	PE family protein	27.7	21.9	56.2
MGA_906	LOCUS_08910	sequence001:1000402..1000656(+)	partial			WP_003899522.1	DUF2631 domain-containing protein	77.4	66.3	76.8
MGA_917	LOCUS_09020	sequence001:1009546..1010007(-)	frameshift,internal_stop_codon	1009546..1009548(-)	1009419	WP_011730517.1	MPT63 family protein	83.0	36.4	46.5
MGA_922	LOCUS_09070	sequence001:1013307..1014797(-)	partial			WP_013531947.1	molybdopterin-binding protein	37.5	69.6	42.8
MGA_927	LOCUS_09120	sequence001:1021317..1022393(+)	internal_stop_codon	1022391..1022393(+)		WP_003405897.1	HNH endonuclease signature motif containing protein	98.9	78.5	70.3
MGA_928	LOCUS_09130	sequence001:1022430..1022699(+)	internal_stop_codon	1022391..1022393(+)		WP_003906521.1	HNH endonuclease signature motif containing protein	98.9	18.2	58.0
MGA_940	LOCUS_09250	sequence001:1033196..1033699(+)	partial			WP_003414678.1	M23 family metallopeptidase	95.8	64.3	76.2
MGA_967	LOCUS_09520	sequence001:1059617..1061620(-)	frameshift,internal_stop_codon	1059713..1059715(-),1059716..1059718(-)	1059778	WP_010886165.1	PE family protein	18.4	8.1	57.3
MGA_1011	LOCUS_09950	sequence001:1146641..1148026(-)	frameshift		1147108	WP_009935595.1	S-sulfocysteine synthase CysK2	66.4	82.0	72.2
MGA_1013	LOCUS_09970	sequence001:1150723..1150887(+)	frameshift,internal_stop_codon	1150881..1150883(+)	1150873,1151129,1150693	WP_011730979.1	IS110 family transposase	85.2	11.5	58.7
MGA_1015	LOCUS_09990	sequence001:1151710..1152549(-)	partial			WP_001809263.1	carbonic anhydrase	54.1	77.6	35.5
MGA_1017	LOCUS_10010	sequence001:1155978..1156577(-)	partial			WP_011392954.1	methyltransferase domain-containing protein	63.8	68.7	35.7
MGA_1025	LOCUS_10090	sequence001:1163608..1164336(+)	frameshift,internal_stop_codon	1163595..1163597(+)	1163345,1163366	WP_087902221.1	IS3-like element IS987 family transposase	95.9	53.8	53.4
MGA_1034	LOCUS_10170	sequence001:1175411..1176502(-)	partial			WP_012257167.1	glycosyltransferase family 1 protein	62.5	61.8	39.4
MGA_1037	LOCUS_10200	sequence001:1179189..1179623(+)	frameshift		1179599	WP_013223398.1	Gfo/Idh/MocA family oxidoreductase	92.4	39.8	58.6
MGA_1038	LOCUS_10210	sequence001:1179664..1180203(+)	frameshift		1179599	WP_013223398.1	Gfo/Idh/MocA family oxidoreductase	100.0	54.7	69.3
MGA_1054	LOCUS_10370	sequence001:1197546..1197743(+)	frameshift		1197891	WP_003893773.1	aldo/keto reductase	69.2	16.4	71.1
MGA_1070	LOCUS_10530	sequence001:1215072..1215731(-)	partial			WP_003415107.1	DNA-binding protein HupB	49.8	50.9	95.4
MGA_1077	LOCUS_10600	sequence001:1222430..1222732(+)	frameshift		1222412,1222646	WP_003893748.1	MFS transporter	75.0	19.0	56.0
MGA_1079	LOCUS_10620	sequence001:1223365..1223784(+)	partial			WP_003415142.1	MFS transporter	87.1	27.2	58.7
MGA_1081	LOCUS_10640	sequence001:1225271..1225456(+)	partial			WP_003893748.1	MFS transporter	83.6	12.9	49.0
MGA_1082	LOCUS_10650	sequence001:1225775..1225975(+)	frameshift,internal_stop_codon	1225973..1225975(+)	1226167	WP_003415142.1	MFS transporter	78.8	11.7	69.2
MGA_1083	LOCUS_10660	sequence001:1226187..1226360(+)	frameshift,internal_stop_codon	1225973..1225975(+)	1226351,1226167	WP_003415142.1	MFS transporter	82.5	10.6	61.7
MGA_1098	LOCUS_10810	sequence001:1241037..1241945(-)	partial			WP_010907486.1	MinD/ParA family protein	92.1	48.1	42.6
MGA_1123	LOCUS_11060	sequence001:1267874..1268866(-)	partial			WP_003114566.1	oxidoreductase	67.9	76.1	37.3
MGA_1158	LOCUS_11410	sequence001:1300294..1302993(-)	partial			WP_099318959.1	PE family protein	13.1	25.8	55.1
MGA_1162	LOCUS_11450	sequence001:1306804..1310226(-)	partial			WP_003914457.1	class 1b ribonucleoside-diphosphate reductase subunit alpha	47.2	74.2	96.5
MGA_1168	LOCUS_11510	sequence001:1313962..1314666(+)	frameshift		1314582,1314591	WP_010886126.1	PPE family protein	75.6	16.8	61.0
MGA_1169	LOCUS_11520	sequence001:1314596..1316047(+)	frameshift,internal_stop_codon	1316045..1316047(+)	1315681,1316035,1315684,1316095,1316104,1316041,1316044,1315693,1315727,1316083,1316056,1314585,1315678,1315743	WP_211695346.1	PPE family protein	79.1	12.3	42.0
MGA_1170	LOCUS_11530	sequence001:1316040..1316402(+)	frameshift,internal_stop_codon	1316045..1316047(+)	1316113,1316071,1316104,1316089,1316107,1316044,1316056	WP_009939158.1	PPE family protein	92.5	3.1	45.7
MGA_1176	LOCUS_11590	sequence001:1323210..1324439(-)	partial			WP_011730106.1	OB-fold domain-containing protein	95.8	69.3	42.5
MGA_1177	LOCUS_11600	sequence001:1324454..1324798(+)	partial			WP_013228942.1	OB-fold domain-containing protein	92.1	19.6	44.9
MGA_1182	LOCUS_11650	sequence001:1329646..1330923(-)	partial			WP_010867517.1	CDC48 family AAA ATPase	79.3	43.9	29.7
MGA_1195	LOCUS_11780	sequence001:1344209..1344733(-)	internal_stop_codon	1344209..1344211(-)		WP_003899112.1	CAP domain-containing protein	99.4	76.9	68.8
MGA_1207	LOCUS_11900	sequence001:1358268..1358546(-)	frameshift,internal_stop_codon	1358611..1358613(-)	1358742	WP_029104427.1	MFS transporter	78.3	17.1	68.1
MGA_1217	LOCUS_12000	sequence001:1365680..1368259(-)	partial			WP_011727014.1	serine/threonine-protein kinase	97.1	72.0	41.3
MGA_1220	LOCUS_12030	sequence001:1370712..1370894(-)	partial			WP_012259554.1	IS5 family transposase	95.0	21.3	50.9
MGA_1222	LOCUS_12050	sequence001:1371139..1371726(+)	frameshift,internal_stop_codon	1371118..1371120(+)	1371573	WP_003903979.1	recombinase family protein	76.9	33.0	34.6
MGA_1239	LOCUS_12210	sequence001:1386625..1387944(+)	partial			WP_011726850.1	LuxR C-terminal-related transcriptional regulator	72.2	79.0	33.8
MGA_1243	LOCUS_12250	sequence001:1389797..1390498(+)	partial			WP_027479549.1	FAD-dependent oxidoreductase	58.8	30.3	48.9
MGA_1244	LOCUS_12260	sequence001:1390611..1390922(+)	partial			WP_012775668.1	IS110 family transposase	93.2	24.6	42.7
MGA_1248	LOCUS_12300	sequence001:1395299..1396282(+)	frameshift		1396081	WP_003891441.1	acyl-CoA dehydrogenase family protein	79.5	68.6	70.0
MGA_1249	LOCUS_12310	sequence001:1396189..1396440(+)	frameshift		1396081	WP_003891441.1	acyl-CoA dehydrogenase family protein	97.6	21.4	90.1
MGA_1264	LOCUS_12450	sequence001:1407346..1407795(+)	frameshift		1407253	WP_003416051.1	HNH endonuclease signature motif containing protein	100.0	35.4	80.7
MGA_1267	LOCUS_12480	sequence001:1409491..1410021(+)	frameshift		1409985	WP_011730987.1	mycofactocin-coupled SDR family oxidoreductase	93.8	60.6	72.8
MGA_1268	LOCUS_12490	sequence001:1409991..1410317(+)	frameshift		1409988	WP_011730130.1	mycofactocin-coupled SDR family oxidoreductase	100.0	38.4	78.7
MGA_1279	LOCUS_12600	sequence001:1421073..1421699(+)	partial			WP_003917120.1	DUF732 domain-containing protein	73.1	82.9	40.1
MGA_1281	LOCUS_12620	sequence001:1422399..1423496(-)	partial			WP_029732907.1	RNA-guided endonuclease TnpB family protein	66.6	58.8	37.5
MGA_1282	LOCUS_12630	sequence001:1423852..1424115(+)	frameshift		1423739,1423742	WP_011728236.1	SDR family oxidoreductase	98.9	30.9	48.8
MGA_1293	LOCUS_12740	sequence001:1433274..1433945(+)	partial			WP_038060574.1	TetR/AcrR family transcriptional regulator	22.9	26.4	62.7
MGA_1300	LOCUS_12810	sequence001:1439251..1441041(+)	partial			WP_011730586.1	LpqN/LpqT family lipoprotein	49.0	46.9	64.0
MGA_1306	LOCUS_12870	sequence001:1444163..1444396(-)	partial			WP_011861579.1	site-specific integrase	80.5	16.7	43.5
MGA_1320	LOCUS_13010	sequence001:1456814..1457050(-)	partial			WP_005110112.1	hypothetical protein	62.8	72.1	63.3
MGA_1321	LOCUS_13020	sequence001:1457047..1457289(-)	internal_stop_codon	1457371..1457373(-)		WP_003898743.1	HNH endonuclease signature motif containing protein	91.2	15.2	58.9
MGA_1322	LOCUS_13030	sequence001:1457371..1457952(-)	frameshift,internal_stop_codon	1457371..1457373(-)	1457965	WP_003405897.1	HNH endonuclease signature motif containing protein	99.0	42.4	74.9
MGA_1323	LOCUS_13040	sequence001:1457888..1458697(-)	frameshift		1457965	WP_003906521.1	HNH endonuclease signature motif containing protein	46.1	27.5	67.7
MGA_1324	LOCUS_13050	sequence001:1459217..1459462(+)	frameshift,internal_stop_codon	1459461..1459463(+)	1459181	WP_011730364.1	MMPL family transporter	95.1	10.2	75.3
MGA_1325	LOCUS_13060	sequence001:1460301..1460648(+)	frameshift		1460265	WP_003416354.1	hypothetical protein	100.0	33.4	68.7
MGA_1341	LOCUS_13220	sequence001:1478355..1478645(-)	frameshift		1478676	WP_011393278.1	fumarylacetoacetate hydrolase family protein	100.0	37.4	41.7
MGA_1342	LOCUS_13230	sequence001:1478530..1479144(-)	frameshift		1478676	WP_003419252.1	2-keto-4-pentenoate hydratase	69.6	54.4	45.1
MGA_1345	LOCUS_13260	sequence001:1481480..1481854(+)	partial			WP_005055673.1	alpha/beta fold hydrolase	87.1	38.8	33.3
MGA_1350	LOCUS_13310	sequence001:1485761..1486684(+)	partial			WP_011728132.1	homogentisate 1,2-dioxygenase	53.7	45.0	84.2
MGA_1362	LOCUS_13420	sequence001:1502746..1503696(-)	partial			WP_003901551.1	PPE family protein	100.0	74.6	41.3
MGA_1396	LOCUS_13760	sequence001:1540847..1541278(-)	partial			WP_003900651.1	hypothetical protein	76.2	74.4	58.0
MGA_1400	LOCUS_13800	sequence001:1543263..1543739(-)	partial			WP_011731426.1	bifunctional 2-methylcitrate synthase/citrate synthase	70.9	31.6	67.2
MGA_1401	LOCUS_13810	sequence001:1543869..1544087(-)	partial			WP_005112515.1	MmgE/PrpD family protein	100.0	15.0	61.3
MGA_1402	LOCUS_13820	sequence001:1544695..1544949(-)	frameshift		1544760,1544512,1544732	WP_003405970.1	MMPL family transporter	75.0	8.2	56.2
MGA_1403	LOCUS_13830	sequence001:1545079..1545648(-)	frameshift		1545081,1545706,1545703	WP_163682492.1	non-ribosomal peptide synthetase	98.9	3.4	66.5
MGA_1404	LOCUS_13840	sequence001:1545593..1546024(-)	frameshift		1545706,1545703	WP_163682492.1	non-ribosomal peptide synthetase	72.0	1.9	58.3
MGA_1410	LOCUS_13900	sequence001:1551206..1554418(+)	partial			WP_012701136.1	non-ribosomal peptide synthetase	56.9	13.9	38.6
MGA_1417	LOCUS_13960	sequence001:1559904..1560170(-)	frameshift		1559939,1559860	WP_003911742.1	alpha/beta hydrolase	88.6	11.9	84.6
MGA_1420	LOCUS_13990	sequence001:1565316..1565894(-)	internal_stop_codon	1565316..1565318(-)		WP_011727561.1	DUF4194 domain-containing protein	100.0	80.0	85.4
MGA_1424	LOCUS_14030	sequence001:1568402..1568722(-)	partial			WP_005093297.1	hypothetical protein	41.5	51.8	68.2
MGA_1428	LOCUS_14070	sequence001:1572473..1572883(+)	frameshift		1572769,1572447	WP_011015557.1	RtcB family protein	81.6	28.5	53.2
MGA_1429	LOCUS_14080	sequence001:1572768..1572989(+)	frameshift		1572772	WP_011015557.1	RtcB family protein	97.3	18.5	66.2
MGA_1430	LOCUS_14090	sequence001:1573006..1573188(-)	frameshift		1572807	WP_003416795.1	UPF0182 family protein	95.0	5.7	82.5
MGA_1446	LOCUS_14240	sequence001:1594401..1594718(-)	partial			WP_011228713.1	molecular chaperone DnaJ2	61.9	22.1	46.2
MGA_1469	LOCUS_14470	sequence001:1614324..1614629(-)	partial			WP_003416891.1	mycothiol system anti-sigma-R factor	74.3	74.3	74.7
MGA_1481	LOCUS_14590	sequence001:1626992..1627387(+)	frameshift		1626978	WP_003894393.1	thiolase family protein	58.8	19.5	93.5
MGA_1490	LOCUS_14680	sequence001:1635330..1635659(+)	partial			WP_003416932.1	Rv3235 family protein	100.0	52.6	69.6
MGA_1493	LOCUS_14710	sequence001:1638146..1638559(+)	internal_stop_codon	1638557..1638559(+)		WP_011730649.1	hypothetical protein	100.0	73.5	49.6
MGA_1495	LOCUS_14720	sequence001:1639148..1639348(-)	partial			WP_007388333.1	response regulator transcription factor	81.8	25.4	46.3
MGA_1499	LOCUS_14760	sequence001:1643820..1644875(-)	partial			WP_011142246.1	IS1634 family transposase	63.2	42.6	30.7
MGA_1500	LOCUS_14770	sequence001:1644996..1645331(+)	partial			WP_003900634.1	hypothetical protein	78.4	56.4	36.4
MGA_1544	LOCUS_15200	sequence001:1694730..1695029(-)	partial			WP_003898652.1	phosphate ABC transporter substrate-binding protein PstS	90.9	24.3	83.3
MGA_1545	LOCUS_15210	sequence001:1695239..1695700(+)	partial			WP_003899482.1	IS607 family element RNA-guided endonuclease TnpB	91.5	30.3	45.1
MGA_1552	LOCUS_15280	sequence001:1702443..1703111(+)	frameshift,internal_stop_codon	1702435..1702437(+)	1702386	WP_003899998.1	GtrA family protein	100.0	82.0	87.2
MGA_1556	LOCUS_15320	sequence001:1706368..1706613(+)	frameshift,internal_stop_codon	1706369..1706371(+)	1706401,1706316	WP_010886160.1	acyl-CoA carboxylase subunit epsilon	86.4	39.5	80.0
MGA_1562	LOCUS_15380	sequence001:1711016..1711414(+)	partial			WP_011727905.1	STAS domain-containing protein	69.7	64.8	45.7
MGA_1566	LOCUS_15420	sequence001:1713031..1713342(-)	partial			WP_003417162.1	protein UsfY	99.0	74.5	75.5
MGA_1575	LOCUS_15510	sequence001:1724779..1726755(-)	partial			WP_010886090.1	PE family protein	20.4	15.2	55.2
MGA_1577	LOCUS_15530	sequence001:1728405..1729121(-)	partial			WP_003900723.1	PPE family protein	98.7	53.8	32.2
MGA_1578	LOCUS_15540	sequence001:1729281..1729526(-)	frameshift		1729723,1729476	WP_003404775.1	phosphate ABC transporter substrate-binding protein PstS	79.0	17.3	87.5
MGA_1579	LOCUS_15550	sequence001:1729523..1730443(-)	frameshift		1729723,1729476	WP_010908715.1	phosphate ABC transporter substrate-binding protein PstS	72.2	59.6	72.4
MGA_1580	LOCUS_15560	sequence001:1731109..1731510(+)	frameshift,internal_stop_codon	1731088..1731090(+)	1731463,1731539,1731518,1731423	WP_011726646.1	IS1634-like element IS1549 family transposase	72.9	20.1	60.2
MGA_1582	LOCUS_15580	sequence001:1732588..1733475(-)	frameshift		1732770,1732638	WP_003911027.1	PE family protein	39.3	26.4	50.9
MGA_1604	LOCUS_15800	sequence001:1764376..1764675(+)	frameshift		1764600,1764819	WP_003401912.1	LuxR family transcriptional regulator	69.7	6.4	66.7
MGA_1605	LOCUS_15810	sequence001:1765110..1765691(+)	frameshift		1765520,1765132	WP_010908523.1	LuxR family transcriptional regulator	66.3	11.7	62.0
MGA_1606	LOCUS_15820	sequence001:1765580..1766779(+)	frameshift,internal_stop_codon	1766778..1766780(+)	1765520,1766834	WP_003401912.1	LuxR family transcriptional regulator	100.0	36.7	51.8
MGA_1607	LOCUS_15830	sequence001:1766878..1767324(+)	frameshift,internal_stop_codon	1766777..1766779(+)	1766836,1767310	WP_003401912.1	LuxR family transcriptional regulator	97.3	13.3	52.1
MGA_1608	LOCUS_15840	sequence001:1767311..1767490(+)	frameshift		1767309	WP_003901139.1	LuxR family transcriptional regulator	100.0	5.1	78.0
MGA_1615	LOCUS_15900	sequence001:1774757..1774939(-)	partial			WP_003899491.1	ExeA family protein	95.0	21.1	87.7
MGA_1616	LOCUS_15910	sequence001:1774936..1775184(-)	partial			WP_003917061.1	DDE-type integrase/transposase/recombinase	63.4	11.7	69.1
MGA_1617	LOCUS_15920	sequence001:1775584..1775880(+)	partial			WP_010950642.1	HNH endonuclease signature motif containing protein	83.7	19.6	82.9
MGA_1631	LOCUS_16050	sequence001:1788873..1790228(+)	partial			WP_012257994.1	AMP-binding protein	21.1	20.6	36.8
MGA_1635	LOCUS_16090	sequence001:1792636..1793250(+)	partial			WP_003905037.1	IS110 family transposase	99.0	35.3	79.2
MGA_1653	LOCUS_16270	sequence001:1812464..1820173(-)	partial			WP_067456433.1	type I polyketide synthase	81.3	53.4	49.0
MGA_1654	LOCUS_16280	sequence001:1820183..1828732(-)	partial			WP_067456433.1	type I polyketide synthase	78.7	57.6	48.3
MGA_1671	LOCUS_16450	sequence001:1846479..1846913(+)	frameshift		1846474,1846811	WP_010950878.1	PE family protein	70.1	15.2	66.3
MGA_1672	LOCUS_16460	sequence001:1846880..1848190(+)	frameshift		1846811	WP_010950878.1	PE family protein	45.0	31.3	34.2
MGA_1689	LOCUS_16630	sequence001:1869052..1869297(+)	partial			WP_013227542.1	glycoside hydrolase family 15 protein	75.3	10.0	60.7
MGA_1690	LOCUS_16640	sequence001:1869321..1869620(+)	partial			WP_003404760.1	IS607-like element IS1535 family transposase	96.0	49.7	57.3
MGA_1691	LOCUS_16650	sequence001:1869738..1870037(+)	frameshift		1869735	WP_013227542.1	glycoside hydrolase family 15 protein	99.0	15.8	67.3
MGA_1698	LOCUS_16720	sequence001:1876579..1877403(+)	frameshift		1876896,1877056,1877500,1877287	WP_014466576.1	MFS transporter	78.8	42.6	39.3
MGA_1700	LOCUS_16740	sequence001:1877597..1878316(+)	partial			WP_011205539.1	methyltransferase domain-containing protein	77.8	69.5	34.2
MGA_1701	LOCUS_16750	sequence001:1878313..1878882(+)	partial			WP_010907706.1	methyltransferase domain-containing protein	51.3	57.1	60.8
MGA_1715	LOCUS_16890	sequence001:1892489..1893967(+)	partial			WP_003898629.1	PPE family protein	40.0	45.7	54.0
MGA_1723	LOCUS_16970	sequence001:1905158..1906255(+)	partial			WP_003814755.1	glycosyltransferase family 2 protein	63.3	77.6	47.8
MGA_1728	LOCUS_17020	sequence001:1909701..1910303(+)	internal_stop_codon	1910301..1910303(+)		WP_013231047.1	ADP-ribosylglycohydrolase family protein	98.5	19.3	46.0
MGA_1729	LOCUS_17030	sequence001:1910432..1910668(+)	internal_stop_codon	1910301..1910303(+)		WP_005091813.1	ADP-ribosylglycohydrolase family protein	61.5	13.8	62.5
MGA_1730	LOCUS_17040	sequence001:1910722..1911573(+)	partial			WP_011727227.1	superoxide dismutase family protein	59.4	71.2	70.2
MGA_1735	LOCUS_17090	sequence001:1915468..1916091(-)	frameshift		1915485	WP_010907694.1	bifunctional tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB/ribosomal protein alanine acetyltransferase RimI	99.0	57.7	75.4
MGA_1763	LOCUS_17370	sequence001:1948874..1949488(-)	partial			WP_003418346.1	50S ribosomal protein L17	66.2	75.0	91.9
MGA_1774	LOCUS_17470	sequence001:1956103..1956381(+)	partial			WP_010908650.1	lipoprotein LpqH	98.9	56.5	74.7
MGA_1776	LOCUS_17490	sequence001:1956738..1957601(-)	partial			WP_003906993.1	PPE family protein	65.5	32.5	52.6
MGA_1777	LOCUS_17500	sequence001:1957704..1958312(-)	partial			WP_011027667.1	class I SAM-dependent methyltransferase	79.7	72.4	36.8
MGA_1797	LOCUS_17700	sequence001:1976467..1977366(-)	frameshift		1977368	WP_003403701.1	FGGY-family carbohydrate kinase	100.0	66.7	74.2
MGA_1798	LOCUS_17710	sequence001:1977327..1977710(-)	frameshift		1977368	WP_003403701.1	FGGY-family carbohydrate kinase	85.8	25.0	66.1
MGA_1800	LOCUS_17730	sequence001:1978324..1978605(-)	frameshift		1978164,1978383	WP_010868502.1	L-threonine 3-dehydrogenase	60.2	14.4	44.6
MGA_1817	LOCUS_17890	sequence001:1989064..1989600(-)	frameshift		1989602,1989131	WP_003898492.1	HNH endonuclease signature motif containing protein	82.0	30.6	55.8
MGA_1818	LOCUS_17900	sequence001:1989579..1989794(-)	frameshift		1989602	WP_003898492.1	HNH endonuclease signature motif containing protein	78.9	11.1	55.4
MGA_1846	LOCUS_18180	sequence001:2013800..2014747(+)	frameshift		2013785,2014626,2014029,2013950	WP_003898850.1	YcaO-like family protein	84.8	64.5	50.9
MGA_1875	LOCUS_18470	sequence001:2050673..2051068(+)	frameshift		2050623	WP_011727619.1	DinB family protein	88.5	57.1	60.3
MGA_1879	LOCUS_18510	sequence001:2054745..2055209(+)	partial			WP_003403304.1	cyclopropane mycolic acid synthase MmaA2	100.0	53.7	75.3
MGA_1882	LOCUS_18540	sequence001:2057458..2057967(+)	frameshift		2057458,2057620,2057894,2057686	WP_005077681.1	YciI family protein	85.2	67.7	48.4
MGA_1884	LOCUS_18560	sequence001:2058428..2058967(+)	frameshift		2058790,2059172,2058438	WP_003892736.1	sigma-70 family RNA polymerase sigma factor	65.4	28.6	77.8
MGA_1885	LOCUS_18570	sequence001:2058906..2059349(+)	frameshift		2058790,2059175	WP_005089001.1	sigma-70 family RNA polymerase sigma factor	64.6	23.3	73.7
MGA_1898	LOCUS_18700	sequence001:2067751..2069559(+)	frameshift		2067580	WP_011728610.1	nitrate reductase	65.8	49.8	81.6
MGA_1904	LOCUS_18760	sequence001:2078756..2078938(+)	partial			WP_003409913.1	type II toxin-antitoxin system VapC family toxin	96.7	43.0	63.8
MGA_1905	LOCUS_18770	sequence001:2079177..2079602(+)	frameshift		2079575	WP_005110627.1	FtsK/SpoIIIE domain-containing protein	95.7	28.3	61.0
MGA_1908	LOCUS_18800	sequence001:2081412..2082608(-)	frameshift		2082625	WP_003903979.1	recombinase family protein	99.0	83.8	30.1
MGA_1909	LOCUS_18810	sequence001:2082593..2082850(-)	frameshift		2082625	WP_003903979.1	recombinase family protein	70.6	12.6	60.0
MGA_1910	LOCUS_18820	sequence001:2082860..2084089(-)	partial			WP_003900464.1	HNH endonuclease signature motif containing protein	99.3	73.3	72.0
MGA_1913	LOCUS_18840	sequence001:2085593..2086111(-)	partial			WP_003411661.1	sulfotransferase	81.4	36.1	78.6
MGA_1914	LOCUS_18850	sequence001:2086108..2086473(-)	partial			WP_003411663.1	cytochrome P450	99.2	24.5	85.0
MGA_1918	LOCUS_18890	sequence001:2090570..2090839(-)	partial			WP_003900349.1	type II toxin-antitoxin system antitoxin MazE4	77.5	68.0	69.6
MGA_1920	LOCUS_18910	sequence001:2091486..2093843(+)	frameshift		2091384,2091427,2093528	WP_211121229.1	DEAD/DEAH box helicase family protein	86.6	80.9	40.0
MGA_1925	LOCUS_18960	sequence001:2097849..2098577(-)	partial			WP_003901238.1	respiratory nitrate reductase subunit gamma	99.6	36.2	73.0
MGA_1926	LOCUS_18970	sequence001:2098648..2098803(-)	frameshift		2098837	WP_011730341.1	nitrate reductase subunit beta	90.2	8.4	87.0
MGA_1929	LOCUS_19000	sequence001:2104059..2104751(-)	frameshift		2104783	WP_011730343.1	nitrate/nitrite transporter	95.7	53.8	74.1
MGA_1936	LOCUS_19070	sequence001:2111124..2111531(-)	frameshift		2111147	WP_003403187.1	type II toxin-antitoxin system VapC family toxin	66.7	67.7	73.3
MGA_1938	LOCUS_19090	sequence001:2113458..2115860(+)	frameshift		2115830	WP_010883981.1	DEAD/DEAH box helicase	98.1	46.0	43.7
MGA_1939	LOCUS_19100	sequence001:2116012..2116347(+)	frameshift		2116567	WP_012257798.1	DEAD/DEAH box helicase	77.5	5.3	33.3
MGA_1940	LOCUS_19110	sequence001:2116304..2116621(+)	frameshift		2116889,2116567	WP_012257798.1	DEAD/DEAH box helicase	83.8	5.3	39.3
MGA_1941	LOCUS_19120	sequence001:2116671..2117321(+)	frameshift		2117228,2116567	WP_010883981.1	DEAD/DEAH box helicase	86.1	11.0	41.4
MGA_1942	LOCUS_19130	sequence001:2117341..2118018(+)	frameshift		2117228,2117940	WP_010883981.1	DEAD/DEAH box helicase	88.9	11.7	43.9
MGA_1943	LOCUS_19140	sequence001:2117928..2118356(+)	frameshift		2117940	WP_010883981.1	DEAD/DEAH box helicase	94.4	7.4	37.3
MGA_1944	LOCUS_19150	sequence001:2118353..2119555(+)	frameshift		2119318	WP_010883982.1	helicase-related protein	78.8	35.9	44.7
MGA_1945	LOCUS_19160	sequence001:2119807..2120256(+)	frameshift		2120151	WP_003419226.1	PPE family protein	76.5	28.1	64.0
MGA_1946	LOCUS_19170	sequence001:2120253..2120846(+)	frameshift		2120151	WP_003419226.1	PPE family protein	97.0	46.3	47.9
MGA_1951	LOCUS_19220	sequence001:2127622..2129025(+)	partial			WP_003411972.1	PE family protein	55.7	71.2	33.1
MGA_1960	LOCUS_19310	sequence001:2137818..2138267(+)	partial			WP_003898507.1	hypothetical protein	57.0	76.1	74.4
MGA_1963	LOCUS_19340	sequence001:2139445..2140314(+)	frameshift		2140290	WP_003403001.1	phosphoribosyltransferase family protein	97.6	63.9	82.0
MGA_1971	LOCUS_19420	sequence001:2146649..2146918(-)	frameshift		2146944	WP_003403012.1	VOC family protein	100.0	34.1	71.9
MGA_1972	LOCUS_19430	sequence001:2146930..2147406(-)	frameshift		2146944	WP_003403012.1	VOC family protein	94.9	57.5	74.7
MGA_1973	LOCUS_19440	sequence001:2147421..2147729(-)	frameshift		2147837	WP_003900174.1	TIGR03086 family metal-binding protein	78.4	18.4	63.8
MGA_1982	LOCUS_19530	sequence001:2156586..2156825(-)	partial			WP_003894957.1	hypothetical protein	77.2	73.5	57.4
MGA_1984	LOCUS_19550	sequence001:2157806..2158258(-)	partial			WP_011027098.1	DUF998 domain-containing protein	74.0	56.2	34.5
MGA_1987	LOCUS_19580	sequence001:2160109..2160333(+)	partial			WP_013227530.1	DUF4396 domain-containing protein	100.0	32.3	71.6
MGA_1992	LOCUS_19630	sequence001:2164737..2165084(+)	partial			WP_011393556.1	2-thiouracil desulfurase family protein	51.3	34.8	43.8
MGA_2005	LOCUS_19760	sequence001:2179114..2180478(-)	frameshift,internal_stop_codon	2179102..2179104(-),2179114..2179116(-)	2179098,2179092,2179053,2179278	WP_010886165.1	PE family protein	27.5	8.1	58.4
MGA_2024	LOCUS_19950	sequence001:2197998..2198855(+)	frameshift		2198849,2198883,2198819,2198900,2198822,2198895,2198831	WP_010950791.1	PE family protein	44.6	20.7	48.0
MGA_2030	LOCUS_20010	sequence001:2201306..2203321(-)	partial			WP_003900169.1	hypothetical protein	58.1	69.7	57.5
MGA_2060	LOCUS_20310	sequence001:2231341..2231709(-)	partial			WP_085181239.1	class I SAM-dependent methyltransferase	79.5	39.8	64.0
MGA_2069	LOCUS_20400	sequence001:2239829..2240230(-)	partial			WP_003402713.1	hypothetical protein	100.0	74.7	73.5
MGA_2075	LOCUS_20460	sequence001:2245585..2245923(-)	frameshift		2245590	WP_003402695.1	glutaredoxin family protein	73.2	84.5	75.6
MGA_2081	LOCUS_20520	sequence001:2253616..2254539(+)	frameshift		2253602	WP_003402684.1	HAD-IB family hydrolase	90.6	75.3	86.2
MGA_2084	LOCUS_20550	sequence001:2256135..2256824(-)	partial			WP_003898486.1	lysophospholipid acyltransferase family protein	100.0	64.0	91.3
MGA_2132	LOCUS_21030	sequence001:2300028..2300645(-)	partial			WP_013224862.1	helix-turn-helix domain-containing protein	54.1	49.8	33.3
MGA_2171	LOCUS_21410	sequence001:2342360..2342890(-)	partial			WP_003402198.1	superoxide dismutase family protein	99.4	72.5	78.9
MGA_2180	LOCUS_21500	sequence001:2352220..2356095(-)	partial			WP_013227688.1	SpoIIE family protein phosphatase	55.4	52.5	41.7
MGA_2186	LOCUS_21560	sequence001:2360729..2361256(+)	frameshift		2360724,2361469,2361430,2361055	WP_003898977.1	HNH endonuclease signature motif containing protein	67.4	26.0	70.3
MGA_2187	LOCUS_21570	sequence001:2361154..2361705(+)	frameshift		2361058,2361469,2361430	WP_003898977.1	HNH endonuclease signature motif containing protein	100.0	39.6	70.4
MGA_2193	LOCUS_21630	sequence001:2367676..2367933(-)	partial			WP_013228394.1	CD225/dispanin family protein	87.1	67.8	42.3
MGA_2219	LOCUS_21890	sequence001:2394133..2394717(-)	frameshift		2394634	WP_003408416.1	PPE family protein	58.8	29.1	39.7
MGA_2238	LOCUS_22080	sequence001:2414389..2414766(+)	partial			WP_011727733.1	ethanolamine ammonia-lyase subunit EutC	99.2	48.1	60.5
MGA_2240	LOCUS_22090	sequence001:2415639..2416028(+)	partial			WP_011727733.1	ethanolamine ammonia-lyase subunit EutC	91.5	45.7	65.3
MGA_2277	LOCUS_22460	sequence001:2461167..2462924(+)	frameshift		2460901	WP_011727124.1	Hsp70 family protein	83.4	83.9	46.3
MGA_2280	LOCUS_22490	sequence001:2466353..2468725(-)	partial			WP_003901837.1	isoniazid-induced protein IniB	26.7	35.5	42.7
MGA_2285	LOCUS_22540	sequence001:2476703..2478409(+)	partial			WP_010886108.1	PE family protein	21.0	14.5	61.3
MGA_2286	LOCUS_22550	sequence001:2478798..2480174(+)	partial			WP_099318959.1	PE family protein	25.8	25.8	85.6
MGA_2287	LOCUS_22560	sequence001:2480401..2481054(-)	partial			WP_003896732.1	hypothetical protein	62.2	66.8	43.8
MGA_2290	LOCUS_22590	sequence001:2483113..2484141(-)	partial			WP_000561483.1	group II intron reverse transcriptase/maturase	90.1	70.4	46.2
MGA_2293	LOCUS_22620	sequence001:2485933..2486736(-)	partial			WP_012027810.1	nucleoside phosphorylase	61.8	63.8	33.9
MGA_2302	LOCUS_22710	sequence001:2494399..2495856(-)	partial			WP_011727115.1	hypothetical protein	67.8	57.3	45.3
MGA_2305	LOCUS_22740	sequence001:2498395..2498859(-)	partial			WP_003401636.1	hypothetical protein	98.7	68.2	72.4
MGA_2307	LOCUS_22760	sequence001:2499944..2500645(+)	internal_stop_codon	2499884..2499886(+)		WP_003401627.1	ZIP family metal transporter	96.6	84.8	67.0
MGA_2319	LOCUS_22870	sequence001:2514318..2515331(-)	frameshift		2514518	WP_011729255.1	serine/threonine-protein kinase	81.3	55.6	63.1
MGA_2321	LOCUS_22890	sequence001:2516885..2517280(-)	partial			WP_003401623.1	muconolactone Delta-isomerase family protein	98.5	63.2	72.9
MGA_2326	LOCUS_22940	sequence001:2520833..2522260(-)	partial			WP_011727115.1	hypothetical protein	69.5	60.0	40.9
MGA_2327	LOCUS_22950	sequence001:2522469..2524358(-)	partial			WP_003401607.1	Hsp70 family protein	74.1	75.8	75.8
MGA_2349	LOCUS_23170	sequence001:2549194..2549730(-)	partial			WP_010886073.1	PPE family protein	80.9	26.9	62.5
MGA_2351	LOCUS_23190	sequence001:2550796..2551014(-)	frameshift,internal_stop_codon	2551284..2551286(-)	2551226,2551238	WP_010950539.1	PPE family protein	76.4	10.2	54.5
MGA_2352	LOCUS_23200	sequence001:2551284..2551478(-)	frameshift,internal_stop_codon	2551280..2551282(-),2551250..2551252(-)	2551600,2551153,2551234,2551522,2551570,2551390	WP_005098619.1	PPE family protein	56.2	7.3	86.5
MGA_2353	LOCUS_23210	sequence001:2551925..2552569(+)	partial			WP_003901009.1	PE family protein	55.1	68.0	66.4
MGA_2354	LOCUS_23220	sequence001:2552566..2553468(+)	partial			WP_165447243.1	nitrate/nitrite transporter	94.7	60.1	61.1
MGA_2360	LOCUS_23280	sequence001:2559163..2561178(+)	partial			WP_010886085.1	PE family protein	6.4	5.4	74.4
MGA_2367	LOCUS_23350	sequence001:2566032..2566832(+)	frameshift,internal_stop_codon	2565951..2565953(+)	2566544,2566599	WP_174519563.1	2-hydroxyacid dehydrogenase	98.5	80.7	67.0
MGA_2371	LOCUS_23390	sequence001:2572284..2572778(-)	frameshift		2572669,2572789	WP_003401380.1	NarK family nitrate/nitrite MFS transporter	60.4	21.4	79.8
MGA_2383	LOCUS_23510	sequence001:2584602..2585798(-)	partial			WP_003900226.1	PPE family protein	48.5	44.2	54.6
MGA_2390	LOCUS_23580	sequence001:2590432..2591277(-)	frameshift		2591426,2591143	WP_003899482.1	IS607 family element RNA-guided endonuclease TnpB	84.0	51.4	84.7
MGA_2391	LOCUS_23590	sequence001:2591289..2591819(-)	frameshift		2591426,2591143	WP_010886182.1	IS607 family element RNA-guided endonuclease TnpB	74.4	32.1	83.2
MGA_2392	LOCUS_23600	sequence001:2591819..2592289(-)	internal_stop_codon	2592341..2592343(-)		WP_010950774.1	IS607-like element IS1602 family transposase	86.5	69.9	86.7
MGA_2410	LOCUS_23780	sequence001:2614328..2614621(-)	frameshift		2614357	WP_010943415.1	OsmC family protein	87.6	45.7	38.8
MGA_2415	LOCUS_23830	sequence001:2620052..2620309(-)	partial			WP_003410654.1	type II toxin-antitoxin system toxin endoribonuclease MazF7	97.6	61.0	67.5
MGA_2429	LOCUS_23970	sequence001:2633411..2635201(+)	partial			WP_003407494.1	PE family protein	16.8	27.0	61.0
MGA_2445	LOCUS_24130	sequence001:2650344..2650751(+)	partial			WP_013228394.1	CD225/dispanin family protein	67.4	79.1	37.4
MGA_2448	LOCUS_24160	sequence001:2653475..2654704(-)	partial			WP_003900088.1	PPE family protein	45.0	31.8	58.4
MGA_2458	LOCUS_24260	sequence001:2667752..2668195(-)	partial			WP_003401194.1	hemophore	63.9	66.9	69.1
MGA_2464	LOCUS_24320	sequence001:2675581..2676987(-)	internal_stop_codon	2677027..2677029(-)		WP_003908489.1	molybdopterin oxidoreductase family protein	97.0	60.7	82.8
MGA_2465	LOCUS_24330	sequence001:2677027..2677854(-)	internal_stop_codon	2677027..2677029(-)		WP_010886070.1	molybdopterin oxidoreductase family protein	100.0	36.1	84.7
MGA_2467	LOCUS_24350	sequence001:2678705..2679703(-)	partial			WP_003908487.1	Ig-like domain-containing protein	77.7	73.3	92.2
MGA_2472	LOCUS_24400	sequence001:2684056..2687415(+)	partial			WP_010886074.1	PE family protein	10.4	19.6	50.0
MGA_2478	LOCUS_24460	sequence001:2693125..2693622(+)	frameshift		2693613	WP_176742093.1	alpha/beta hydrolase domain-containing protein	95.2	31.8	36.1
MGA_2502	LOCUS_24700	sequence001:2717499..2718173(-)	partial			WP_010920184.1	CaiB/BaiF CoA-transferase family protein	62.1	35.1	50.4
MGA_2525	LOCUS_24930	sequence001:2741699..2742505(+)	frameshift		2741545,2741638	WP_003901256.1	PPE family protein	70.9	27.6	42.9
MGA_2526	LOCUS_24940	sequence001:2743216..2743680(+)	partial			WP_010886117.1	PE family protein	73.4	9.0	45.8
MGA_2527	LOCUS_24950	sequence001:2743641..2744834(+)	frameshift,internal_stop_codon	2743412..2743414(+)	2743528,2743652,2743438	WP_003401003.1	PE-PPE domain-containing protein	86.6	70.9	41.8
MGA_2533	LOCUS_25010	sequence001:2751230..2751868(-)	frameshift		2751905	WP_003400961.1	TetR/AcrR family transcriptional regulator	94.8	71.8	72.1
MGA_2546	LOCUS_25140	sequence001:2761860..2762498(+)	partial			WP_011730444.1	zinc-binding dehydrogenase	100.0	61.1	78.8
MGA_2559	LOCUS_25270	sequence001:2774469..2775365(+)	frameshift		2775317	WP_003899826.1	F420-dependent hydroxymycolic acid dehydrogenase	99.3	80.8	70.7
MGA_2560	LOCUS_25280	sequence001:2775404..2775565(+)	frameshift		2775320	WP_010950347.1	F420-dependent hydroxymycolic acid dehydrogenase	100.0	14.7	81.1
MGA_2581	LOCUS_25490	sequence001:2798595..2800478(+)	partial			WP_211477833.1	ankyrin repeat domain-containing protein	15.2	40.7	41.1
MGA_2593	LOCUS_25610	sequence001:2815319..2815543(-)	partial			WP_003906521.1	HNH endonuclease signature motif containing protein	95.9	15.7	63.4
MGA_2601	LOCUS_25690	sequence001:2819684..2820709(-)	frameshift		2820740	WP_010886066.1	PE family protein	19.4	13.3	60.6
MGA_2605	LOCUS_25730	sequence001:2822485..2822880(+)	partial			WP_037062758.1	sigma-70 family RNA polymerase sigma factor	95.4	38.1	48.8
MGA_2611	LOCUS_25790	sequence001:2832138..2832905(+)	partial			WP_003916001.1	alpha/beta fold hydrolase	54.1	29.4	73.9
MGA_2620	LOCUS_25880	sequence001:2843395..2843958(-)	frameshift		2843999	WP_003410146.1	cation diffusion facilitator family transporter	89.3	50.3	74.3
MGA_2621	LOCUS_25890	sequence001:2843958..2844512(-)	frameshift		2844002	WP_003410146.1	cation diffusion facilitator family transporter	74.5	41.3	73.7
MGA_2626	LOCUS_25940	sequence001:2850989..2851360(+)	frameshift		2850933	WP_005112563.1	ABC transporter permease	70.7	23.6	58.6
MGA_2631	LOCUS_25990	sequence001:2856313..2856873(+)	partial			WP_003898977.1	HNH endonuclease signature motif containing protein	62.9	25.8	56.4
MGA_2632	LOCUS_26000	sequence001:2856898..2857332(+)	partial			WP_003403977.1	MFS transporter	56.9	20.7	38.4
MGA_2633	LOCUS_26010	sequence001:2857302..2859023(-)	partial			WP_011140563.1	hypothetical protein	43.3	83.1	33.1
MGA_2642	LOCUS_26100	sequence001:2865696..2866253(+)	partial			WP_003900801.1	alpha/beta hydrolase	100.0	67.0	84.3
MGA_2652	LOCUS_26200	sequence001:2876051..2876332(-)	partial			WP_010950642.1	HNH endonuclease signature motif containing protein	97.8	21.8	79.1
MGA_2673	LOCUS_26410	sequence001:2898216..2899154(-)	frameshift		2899279	WP_003400562.1	glycoside hydrolase family 6 protein	96.2	79.2	74.4
MGA_2718	LOCUS_26860	sequence001:2943626..2945272(+)	partial			WP_003912368.1	cell division-associated protein FhaA	49.1	53.1	71.9
MGA_2732	LOCUS_27000	sequence001:2958602..2959246(-)	partial			WP_003400291.1	DUF3566 domain-containing protein	100.0	73.4	64.6
MGA_2734	LOCUS_27020	sequence001:2961907..2962149(+)	partial			WP_003411866.1	DUF1918 domain-containing protein	68.8	68.8	90.9
MGA_2760	LOCUS_27280	sequence001:2994640..2995197(-)	partial			WP_003400124.1	NUDIX domain-containing protein	100.0	74.6	84.9
MGA_2769	LOCUS_27370	sequence001:3001552..3004014(+)	partial			WP_003899759.1	outer membrane channel protein/necrotizing toxin glycohydrolase CpnT	77.4	70.6	52.8
MGA_2771	LOCUS_27390	sequence001:3004930..3005364(+)	partial			WP_010950962.1	hypothetical protein	55.6	53.7	60.0
MGA_2774	LOCUS_27420	sequence001:3006890..3007555(+)	partial			WP_003900778.1	DUF5632 domain-containing protein	100.0	53.9	75.6
MGA_2780	LOCUS_27480	sequence001:3016543..3016848(+)	partial			WP_010950653.1	alpha/beta hydrolase	87.1	13.4	67.0
MGA_2782	LOCUS_27490	sequence001:3017129..3018289(+)	partial			WP_011731247.1	alpha/beta hydrolase	99.0	60.6	36.2
MGA_2789	LOCUS_27560	sequence001:3022873..3023583(+)	partial			WP_003899748.1	MinD/ParA family protein	99.6	68.9	94.5
MGA_2791	LOCUS_27580	sequence001:3025094..3026758(+)	partial			WP_003400012.1	type VII secretion system ESX-2 serine protease mycosin MycP2	59.4	59.8	88.8
MGA_2792	LOCUS_27590	sequence001:3026755..3027750(+)	frameshift		3027672	WP_003902572.1	type VII secretion system ESX-2 subunit EccE2	92.7	57.2	76.5
MGA_2793	LOCUS_27600	sequence001:3027747..3028433(+)	frameshift		3027675	WP_003902572.1	type VII secretion system ESX-2 subunit EccE2	98.7	41.3	82.2
MGA_2800	LOCUS_27670	sequence001:3037905..3038717(-)	partial			WP_003901751.1	type VII secretion system ESX-1 associated protein EspJ	81.1	70.4	48.9
MGA_2802	LOCUS_27690	sequence001:3040363..3041211(-)	frameshift		3041462	WP_010907486.1	MinD/ParA family protein	99.6	48.0	68.3
MGA_2817	LOCUS_27840	sequence001:3057287..3057574(+)	frameshift		3057281	WP_003899734.1	transcriptional regulator WhiB6	100.0	82.8	87.5
MGA_2820	LOCUS_27870	sequence001:3058256..3059140(-)	frameshift		3058297	WP_003399818.1	MinD/ParA family protein	94.2	71.0	73.6
MGA_2824	LOCUS_27910	sequence001:3066775..3067209(-)	frameshift		3067281,3067347	WP_005078606.1	LLM class F420-dependent oxidoreductase	80.6	41.9	90.5
MGA_2837	LOCUS_28040	sequence001:3077577..3078272(-)	internal_stop_codon	3077577..3077579(-)		WP_003399745.1	TMEM165/GDT1 family protein	95.7	74.8	62.8
MGA_2841	LOCUS_28080	sequence001:3081247..3081909(+)	partial			WP_003899726.1	DUF4328 domain-containing protein	99.5	63.2	60.3
MGA_2844	LOCUS_28110	sequence001:3083481..3084413(-)	frameshift		3084696	WP_235624060.1	LCP family protein	94.8	68.7	68.4
MGA_2849	LOCUS_28160	sequence001:3087556..3087906(-)	internal_stop_codon	3087556..3087558(-)		WP_003899719.1	metallopeptidase family protein	99.1	83.9	84.3
MGA_2862	LOCUS_28290	sequence001:3099594..3100346(+)	partial			WP_005114868.1	hypothetical protein	67.2	81.9	32.8
MGA_2893	LOCUS_28600	sequence001:3147321..3147668(-)	partial			WP_013228114.1	flotillin family protein	75.7	22.7	65.5
MGA_2899	LOCUS_28660	sequence001:3154597..3156228(+)	partial			WP_003911027.1	PE family protein	20.1	24.8	66.1
MGA_2900	LOCUS_28670	sequence001:3156262..3157524(+)	partial			WP_002222986.1	DegT/DnrJ/EryC1/StrS aminotransferase family protein	66.2	70.1	36.9
MGA_2902	LOCUS_28690	sequence001:3159172..3161022(+)	partial			WP_011086332.1	hypothetical protein	59.9	71.5	25.6
MGA_2905	LOCUS_28720	sequence001:3164051..3164398(+)	partial			WP_003901025.1	lipoprotein LpqS	84.3	73.8	42.3
MGA_2909	LOCUS_28760	sequence001:3167368..3167730(+)	partial			WP_003901025.1	lipoprotein LpqS	82.5	74.6	39.0
MGA_2926	LOCUS_28930	sequence001:3185826..3186287(-)	partial			WP_003899482.1	IS607 family element RNA-guided endonuclease TnpB	91.5	30.3	44.4
MGA_2928	LOCUS_28950	sequence001:3187805..3188479(+)	partial			WP_013384784.1	MT-A70 family methyltransferase	62.1	71.0	35.7
MGA_2944	LOCUS_29100	sequence001:3199542..3200048(-)	partial			WP_003420544.1	lipoprotein LpqH	69.6	73.6	76.1
MGA_2952	LOCUS_29180	sequence001:3208537..3208812(-)	partial			WP_010908859.1	DUF1049 domain-containing protein	92.3	74.3	61.9
MGA_2968	LOCUS_29340	sequence001:3218220..3218630(-)	partial			WP_003975421.1	YbjQ family protein	74.3	83.5	64.4
MGA_2970	LOCUS_29360	sequence001:3220105..3221337(+)	partial			WP_011030050.1	MBL fold metallo-hydrolase	59.0	70.0	28.4
MGA_2977	LOCUS_29430	sequence001:3226024..3226281(+)	partial			WP_003401533.1	type VII secretion system ESX-3 subunit EccE3	74.1	19.0	57.1
MGA_2989	LOCUS_29550	sequence001:3239331..3239840(-)	frameshift		3239306,3239531	WP_014640125.1	peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB	41.4	30.4	31.4
MGA_2993	LOCUS_29590	sequence001:3242789..3243211(-)	partial			WP_003420436.1	DUF2330 domain-containing protein	82.1	33.2	60.7
MGA_2995	LOCUS_29610	sequence001:3244764..3244997(+)	partial			WP_003405897.1	HNH endonuclease signature motif containing protein	87.0	14.9	49.3
MGA_2997	LOCUS_29630	sequence001:3245712..3246068(-)	internal_stop_codon	3245712..3245714(-)		WP_011727799.1	FAD-dependent monooxygenase	97.5	22.4	47.8
MGA_3001	LOCUS_29670	sequence001:3249607..3249954(-)	partial			WP_003907117.1	radical SAM protein	93.9	13.9	76.9
MGA_3002	LOCUS_29680	sequence001:3249882..3250535(-)	frameshift		3249624	WP_003907117.1	radical SAM protein	85.3	23.8	84.3
MGA_3003	LOCUS_29690	sequence001:3250687..3250815(+)	internal_stop_codon	3250813..3250815(+)		WP_003408261.1	DUF427 domain-containing protein	97.6	35.7	82.9
MGA_3004	LOCUS_29700	sequence001:3251087..3251338(+)	frameshift		3251049	WP_003408263.1	hypothetical protein	98.8	63.8	69.9
MGA_3005	LOCUS_29710	sequence001:3251590..3252198(-)	frameshift		3251586,3251757	WP_005112261.1	cytochrome c biogenesis CcdA family protein	63.9	45.6	62.8
MGA_3009	LOCUS_29750	sequence001:3254773..3255351(-)	partial			WP_013228620.1	carboxymuconolactone decarboxylase family protein	72.4	75.1	42.9
MGA_3015	LOCUS_29810	sequence001:3259586..3260026(+)	partial			WP_011014065.1	SDR family NAD(P)-dependent oxidoreductase	85.6	66.5	40.9
MGA_3018	LOCUS_29840	sequence001:3261742..3262257(-)	partial			WP_003420425.1	cutinase family protein	100.0	73.4	70.8
MGA_3028	LOCUS_29940	sequence001:3271750..3272568(-)	frameshift		3271628	WP_003420421.1	lipid uptake coordinator LucA	61.4	65.7	76.6
MGA_3035	LOCUS_30010	sequence001:3280274..3280660(+)	partial			WP_003420408.1	YbaB/EbfC family nucleoid-associated protein	70.3	67.7	86.7
MGA_3042	LOCUS_30080	sequence001:3285770..3286336(+)	partial			WP_003977488.1	TetR/AcrR family transcriptional regulator	81.4	74.3	39.1
MGA_3047	LOCUS_30130	sequence001:3292285..3292524(+)	partial			WP_003419816.1	hypothetical protein	87.3	65.1	56.5
MGA_3059	LOCUS_30250	sequence001:3305116..3305826(-)	partial			WP_050039320.1	PadR family transcriptional regulator	61.0	76.6	72.2
MGA_3060	LOCUS_30260	sequence001:3305962..3306333(+)	partial			WP_011727909.1	hypothetical protein	57.7	62.1	55.6
MGA_3067	LOCUS_30330	sequence001:3312470..3313747(-)	frameshift		3313824	WP_003419768.1	membrane protein	78.6	74.9	58.9
MGA_3078	LOCUS_30430	sequence001:3325357..3326292(+)	partial			WP_197530111.1	SRPBCC family protein	47.9	59.2	52.3
MGA_3081	LOCUS_30460	sequence001:3328354..3328548(+)	partial			WP_011727890.1	CDGSH iron-sulfur domain-containing protein	81.2	73.2	73.1
MGA_3082	LOCUS_30470	sequence001:3328690..3328998(-)	partial			WP_085095815.1	IS256 family transposase	60.8	15.1	74.2
MGA_3087	LOCUS_30520	sequence001:3335813..3338017(-)	partial			WP_013227688.1	SpoIIE family protein phosphatase	84.9	45.6	41.1
MGA_3096	LOCUS_30610	sequence001:3343144..3344196(-)	partial			WP_011728263.1	AraC family transcriptional regulator	58.3	57.5	29.8
MGA_3113	LOCUS_30780	sequence001:3362749..3363606(+)	partial			WP_174552531.1	SDR family NAD(P)-dependent oxidoreductase	65.6	67.8	32.8
MGA_3118	LOCUS_30830	sequence001:3366623..3367321(+)	internal_stop_codon	3366620..3366622(+)		WP_011268143.1	acyl-CoA dehydrogenase family protein	91.8	62.0	39.4
MGA_3126	LOCUS_30910	sequence001:3372375..3374303(+)	partial			WP_003906993.1	PPE family protein	41.6	43.7	53.9
MGA_3127	LOCUS_30920	sequence001:3374376..3374774(+)	partial			WP_005093980.1	SDR family oxidoreductase	62.9	33.6	56.6
MGA_3156	LOCUS_31210	sequence001:3404536..3405183(+)	partial			WP_003419679.1	type II secretion system F family protein	92.1	74.4	66.2
MGA_3159	LOCUS_31240	sequence001:3406281..3406634(+)	partial			WP_003899621.1	pilus assembly protein TadG-related protein	70.9	77.6	50.6
MGA_3162	LOCUS_31270	sequence001:3408669..3409988(-)	partial			WP_010886154.1	PE family protein	29.6	24.8	56.9
MGA_3166	LOCUS_31300	sequence001:3413091..3413279(-)	partial			WP_003410131.1	hypothetical protein	90.3	47.1	85.7
MGA_3171	LOCUS_31350	sequence001:3420439..3420702(+)	partial			WP_011730386.1	alpha/beta fold hydrolase	96.6	33.7	61.2
MGA_3181	LOCUS_31450	sequence001:3428343..3429536(-)	frameshift,internal_stop_codon	3428328..3428330(-)	3428303,3428492,3429543	WP_170213355.1	BTAD domain-containing putative transcriptional regulator	86.4	35.0	42.3
MGA_3183	LOCUS_31470	sequence001:3430359..3430664(-)	frameshift		3430418	WP_013227699.1	BTAD domain-containing putative transcriptional regulator	58.4	6.4	55.9
MGA_3187	LOCUS_31510	sequence001:3433249..3433443(-)	partial			WP_003900505.1	PPE family protein	40.6	6.6	92.3
MGA_3195	LOCUS_31590	sequence001:3440249..3441460(-)	partial			WP_003906680.1	PPE family protein	53.6	53.3	42.0
MGA_3218	LOCUS_31820	sequence001:3464234..3465523(+)	partial			WP_009938544.1	PE family protein	27.5	15.2	55.9
MGA_3225	LOCUS_31890	sequence001:3469924..3470301(+)	frameshift		3470362,3470163	WP_010886177.1	PE family protein	77.6	17.1	49.0
MGA_3229	LOCUS_31930	sequence001:3471759..3472751(-)	partial			WP_011404785.1	DUF2309 domain-containing protein	95.2	40.8	39.4
MGA_3230	LOCUS_31940	sequence001:3472763..3473683(-)	frameshift		3472807	WP_000026988.1	Na-translocating system protein MpsB	80.4	30.7	28.5
MGA_3231	LOCUS_31950	sequence001:3473680..3475242(-)	partial			WP_164921384.1	proton-conducting transporter membrane subunit	55.6	55.6	34.8
MGA_3244	LOCUS_32080	sequence001:3485960..3487447(-)	partial			WP_010950597.1	PE family protein	27.1	21.2	56.7
MGA_3246	LOCUS_32100	sequence001:3487720..3487959(-)	frameshift		3487961	WP_003974546.1	VOC family protein	82.3	48.5	37.9
MGA_3248	LOCUS_32120	sequence001:3488147..3489163(-)	frameshift,internal_stop_codon	3489173..3489175(-)	3488623	WP_003419420.1	arsenic transport integral membrane protein ArsB	53.3	46.0	55.3
MGA_3263	LOCUS_32270	sequence001:3503508..3504017(+)	partial			WP_001291837.1	NADP-dependent isocitrate dehydrogenase	65.1	22.5	61.8
MGA_3264	LOCUS_32280	sequence001:3503908..3504777(+)	partial			WP_001291837.1	NADP-dependent isocitrate dehydrogenase	99.7	60.7	51.8
MGA_3265	LOCUS_32290	sequence001:3504813..3505226(+)	partial			WP_005479856.1	2,4'-dihydroxyacetophenone dioxygenase family protein	73.0	64.1	37.4
MGA_3288	LOCUS_32510	sequence001:3525488..3525697(+)	frameshift,internal_stop_codon	3525474..3525476(+),3525696..3525698(+)	3525361,3525385	WP_003900096.1	DUF559 domain-containing protein	100.0	25.3	54.8
MGA_3310	LOCUS_32730	sequence001:3544723..3546189(-)	partial			WP_010886165.1	PE family protein	31.8	10.1	42.0
MGA_3314	LOCUS_32770	sequence001:3548225..3548716(+)	partial			WP_003417257.1	pilin structural subunit Mtp	26.4	41.7	51.2
MGA_3316	LOCUS_32790	sequence001:3550284..3552272(-)	partial			WP_011729255.1	serine/threonine-protein kinase	41.7	56.0	64.1
MGA_3320	LOCUS_32830	sequence001:3554829..3555182(+)	partial			WP_003901025.1	lipoprotein LpqS	82.9	73.1	39.8
MGA_3350	LOCUS_33130	sequence001:3584628..3584936(-)	frameshift		3584931,3584742,3584651,3584636,3584669	WP_010886177.1	PE family protein	79.4	13.9	59.3
MGA_3373	LOCUS_33360	sequence001:3606051..3606665(-)	partial			WP_005113065.1	multicopper oxidase family protein	51.5	19.5	41.0
MGA_3386	LOCUS_33490	sequence001:3617135..3618997(-)	partial			WP_011727491.1	bifunctional serine/threonine-protein kinase/transporter substrate-binding domain-containing protein	42.7	43.8	56.2
MGA_3387	LOCUS_33500	sequence001:3619257..3619460(+)	frameshift		3619439	WP_011728588.1	TDT family transporter	70.1	11.7	61.7
MGA_3390	LOCUS_33530	sequence001:3621619..3622548(-)	frameshift		3622541	WP_010886170.1	patatin-like protein	99.4	30.1	68.7
MGA_3391	LOCUS_33540	sequence001:3622452..3624752(-)	frameshift		3622541	WP_010886170.1	patatin-like protein	92.8	70.4	61.2
MGA_3392	LOCUS_33550	sequence001:3624919..3625611(+)	internal_stop_codon	3625609..3625611(+)		WP_000898981.1	alpha/beta hydrolase	92.6	64.5	34.6
MGA_3406	LOCUS_33690	sequence001:3639174..3640187(-)	partial			WP_093457344.1	glycerate kinase	81.9	73.9	42.2
MGA_3410	LOCUS_33730	sequence001:3643895..3645115(+)	partial			WP_010950570.1	PE domain-containing protein	57.1	29.1	34.9
MGA_3411	LOCUS_33740	sequence001:3645278..3645532(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	95.2	13.7	55.0
MGA_3412	LOCUS_33750	sequence001:3645593..3648259(+)	partial			WP_003403850.1	phosphoglycerate mutase PE_PGRS11	34.9	52.6	72.9
MGA_3423	LOCUS_33860	sequence001:3655557..3656930(-)	partial			WP_003900090.1	PPE family protein	65.0	58.2	51.5
MGA_3437	LOCUS_34000	sequence001:3668968..3669546(+)	internal_stop_codon	3669544..3669546(+)		WP_003910785.1	DUF222 domain-containing protein	94.8	82.4	56.5
MGA_3438	LOCUS_34010	sequence001:3669494..3670330(+)	frameshift		3669354,3669348	WP_003903691.1	HNH endonuclease signature motif containing protein	98.9	60.6	76.8
MGA_3440	LOCUS_34030	sequence001:3671727..3673274(-)	partial			WP_010950588.1	serine/threonine protein kinase PknF	60.0	65.8	57.4
MGA_3442	LOCUS_34050	sequence001:3675048..3675749(-)	internal_stop_codon	3675936..3675938(-)		WP_003403938.1	iron-stress inducible esterase	99.6	76.6	76.3
MGA_3456	LOCUS_34190	sequence001:3690970..3691722(+)	partial			WP_020640552.1	LLM class F420-dependent oxidoreductase	32.4	26.2	35.8
MGA_3458	LOCUS_34210	sequence001:3692983..3693567(+)	internal_stop_codon	3693565..3693567(+)		WP_010950904.1	PE family protein	65.5	10.1	58.7
MGA_3463	LOCUS_34260	sequence001:3696857..3697111(+)	frameshift,internal_stop_codon	3696732..3696734(+)	3697075	WP_003406864.1	adenylate/guanylate cyclase domain-containing protein	86.9	13.5	54.8
MGA_3465	LOCUS_34280	sequence001:3698344..3698697(-)	frameshift,internal_stop_codon	3698344..3698346(-)	3698115	WP_003404002.1	transglutaminase-like domain-containing protein	99.1	47.9	75.0
MGA_3466	LOCUS_34290	sequence001:3698720..3699163(-)	partial			WP_003404004.1	LLM class flavin-dependent oxidoreductase	95.9	42.9	67.1
MGA_3471	LOCUS_34340	sequence001:3703911..3704102(+)	partial			WP_198408425.1	enoyl-CoA hydratase/isomerase family protein	76.2	17.8	75.0
MGA_3479	LOCUS_34420	sequence001:3711578..3712174(-)	frameshift		3712188	WP_003898594.1	stealth family protein	91.9	34.2	86.3
MGA_3480	LOCUS_34430	sequence001:3712183..3713172(-)	frameshift		3712191	WP_003898594.1	stealth family protein	100.0	61.8	79.9
MGA_3512	LOCUS_34750	sequence001:3745861..3746073(-)	partial			WP_162470589.1	hypothetical protein	97.1	50.5	39.7
MGA_3519	LOCUS_34820	sequence001:3751137..3751934(-)	frameshift		3751148	WP_011036226.1	hypothetical protein	78.1	68.6	33.8
MGA_3524	LOCUS_34870	sequence001:3754532..3755419(-)	partial			WP_003022555.1	glycosyltransferase	90.2	47.6	31.6
MGA_3527	LOCUS_34900	sequence001:3758664..3758906(+)	partial			WP_003412350.1	Rv2407 family type 3 sulfatase	68.8	19.6	80.0
MGA_3530	LOCUS_34930	sequence001:3760078..3760446(-)	frameshift		3760193,3760209,3760567	WP_003899172.1	SWIM zinc finger family protein	66.4	29.2	88.9
MGA_3531	LOCUS_34940	sequence001:3760457..3760777(-)	frameshift		3760193,3760209,3760567	WP_003899172.1	SWIM zinc finger family protein	76.4	29.2	74.1
MGA_3532	LOCUS_34950	sequence001:3760770..3761636(-)	frameshift		3761580	WP_003911743.1	DEAD/DEAH box helicase	93.4	26.9	88.2
MGA_3533	LOCUS_34960	sequence001:3761524..3761895(-)	frameshift		3761580,3762052	WP_010950658.1	DEAD/DEAH box helicase	88.6	10.8	84.4
MGA_3534	LOCUS_34970	sequence001:3761888..3762433(-)	frameshift		3762052	WP_003911743.1	DEAD/DEAH box helicase	70.2	12.8	80.8
MGA_3536	LOCUS_34990	sequence001:3763029..3763592(-)	partial			WP_003416640.1	ATP-binding protein	84.0	36.6	92.4
MGA_3540	LOCUS_35020	sequence001:3765532..3765993(+)	partial			WP_003899482.1	IS607 family element RNA-guided endonuclease TnpB	91.5	30.3	44.4
MGA_3546	LOCUS_35080	sequence001:3773231..3773569(+)	partial			WP_005089225.1	hypothetical protein	82.1	60.5	67.4
MGA_3548	LOCUS_35100	sequence001:3774860..3776074(-)	partial			WP_013225697.1	amidohydrolase family protein	70.3	71.3	30.3
MGA_3551	LOCUS_35130	sequence001:3777919..3778368(+)	frameshift		3778344	WP_011090665.1	3-carboxy-cis,cis-muconate cycloisomerase	93.3	30.7	50.4
MGA_3552	LOCUS_35140	sequence001:3778404..3778889(+)	frameshift		3778347	WP_014206931.1	3-carboxy-cis,cis-muconate cycloisomerase	77.0	29.3	36.4
MGA_3565	LOCUS_35270	sequence001:3793311..3793994(-)	partial			WP_208622396.1	non-ribosomal peptide synthetase	87.7	8.8	89.9
MGA_3566	LOCUS_35280	sequence001:3793919..3794401(-)	frameshift		3794424,3794506	WP_208622396.1	non-ribosomal peptide synthetase	80.6	5.7	82.2
MGA_3569	LOCUS_35310	sequence001:3796549..3796935(+)	frameshift		3796574	WP_003404373.1	methyltransferase domain-containing protein	93.0	44.1	79.0
MGA_3576	LOCUS_35370	sequence001:3803648..3803992(+)	partial			WP_201996915.1	IS3 family transposase	93.9	28.3	42.1
MGA_3577	LOCUS_35380	sequence001:3804206..3805096(+)	partial			WP_010908871.1	RDD family protein	46.6	61.4	43.9
MGA_3607	LOCUS_35680	sequence001:3834602..3835471(+)	partial			WP_003409061.1	PPE family protein	99.7	71.1	36.4
MGA_3609	LOCUS_35700	sequence001:3836347..3836679(-)	partial			WP_003901139.1	LuxR family transcriptional regulator	33.6	3.2	78.4
MGA_3612	LOCUS_35730	sequence001:3837486..3837641(-)	frameshift		3837673,3837722	WP_010950392.1	LuxR family transcriptional regulator	96.1	4.5	83.7
MGA_3642	LOCUS_36030	sequence001:3866922..3868556(-)	partial			WP_010950597.1	PE family protein	22.6	19.9	57.3
MGA_3655	LOCUS_36160	sequence001:3879841..3880218(+)	frameshift		3880071	WP_011729446.1	IS110 family transposase	64.8	20.1	53.1
MGA_3656	LOCUS_36170	sequence001:3880775..3881929(-)	frameshift		3881898,3882172	WP_003900400.1	phospholipase C	97.4	72.4	70.7
MGA_3676	LOCUS_36370	sequence001:3903182..3903697(-)	partial			WP_003407152.1	membrane protein	88.3	68.6	53.0
MGA_3677	LOCUS_36380	sequence001:3903694..3904455(-)	partial			WP_011730075.1	membrane protein	64.8	52.8	45.1
MGA_3684	LOCUS_36450	sequence001:3908959..3911178(+)	partial			WP_004193152.1	T2SS-translocated chitinase	41.4	68.7	41.9
MGA_3692	LOCUS_36530	sequence001:3918255..3919103(+)	partial			WP_011730075.1	membrane protein	79.4	74.6	45.0
MGA_3700	LOCUS_36610	sequence001:3924486..3924872(+)	frameshift		3924427	WP_003404418.1	SRPBCC family protein	98.4	80.3	84.1
MGA_3704	LOCUS_36650	sequence001:3930164..3930484(-)	partial			WP_014206225.1	four-helix bundle copper-binding protein	80.2	73.7	32.2
MGA_3717	LOCUS_36780	sequence001:3941318..3942184(-)	partial			WP_003900223.1	resuscitation-promoting factor protein RpfA	61.5	41.8	69.7
MGA_3723	LOCUS_36840	sequence001:3947282..3947674(-)	partial			WP_009936386.1	amino acid permease	98.5	22.7	69.5
MGA_3725	LOCUS_36860	sequence001:3948992..3950659(-)	partial			WP_003899159.1	hypothetical protein	38.4	66.3	41.4
MGA_3740	LOCUS_37010	sequence001:3962178..3962432(-)	frameshift		3962204	WP_003404633.1	VOC family protein	90.5	50.0	88.2
MGA_3752	LOCUS_37130	sequence001:3974652..3974888(+)	frameshift		3974599,3974535	WP_011730691.1	ABC transporter ATP-binding protein	50.0	6.0	71.8
MGA_3758	LOCUS_37190	sequence001:3982705..3983337(+)	frameshift		3983307,3983310	WP_009935618.1	PPE family protein	96.2	20.8	46.5
MGA_3759	LOCUS_37200	sequence001:3983267..3984217(+)	frameshift		3984184,3984187,3983307	WP_003906336.1	PPE family protein	86.7	10.8	33.2
MGA_3761	LOCUS_37210	sequence001:3984898..3987693(+)	frameshift,internal_stop_codon	3985441..3985443(+)	3985413,3985749,3985863,3985752,3985881,3985560,3985407	WP_003906336.1	PPE family protein	96.1	37.1	37.2
MGA_3775	LOCUS_37350	sequence001:3999506..3999901(-)	partial			WP_010908041.1	hypothetical protein	45.8	75.9	81.7
MGA_3791	LOCUS_37510	sequence001:4017732..4018160(-)	partial			WP_003906521.1	HNH endonuclease signature motif containing protein	61.3	19.3	52.9
MGA_3796	LOCUS_37560	sequence001:4023201..4024121(-)	partial			WP_011730613.1	diiron oxygenase	96.1	71.6	74.1
MGA_3798	LOCUS_37580	sequence001:4025138..4026853(+)	partial			WP_003910446.1	PE family protein	19.6	18.2	61.2
MGA_3803	LOCUS_37630	sequence001:4031325..4031591(-)	partial			WP_010907562.1	chorismate mutase	85.2	74.3	75.6
MGA_3804	LOCUS_37640	sequence001:4032001..4032234(+)	frameshift,internal_stop_codon	4032232..4032234(+)	4032441,4032507,4031933	WP_003900088.1	PPE family protein	96.1	12.7	52.7
MGA_3809	LOCUS_37690	sequence001:4035876..4036283(-)	frameshift		4036228,4036268	WP_011730597.1	hypothetical protein	87.4	52.0	55.1
MGA_3848	LOCUS_38080	sequence001:4078382..4078615(+)	partial			WP_003899674.1	tyrosine-type recombinase/integrase	72.7	78.9	48.2
MGA_3852	LOCUS_38120	sequence001:4080183..4080893(+)	partial			WP_010943266.1	alpha/beta fold hydrolase	77.5	71.1	30.1
MGA_3854	LOCUS_38140	sequence001:4081433..4082317(-)	partial			WP_010950806.1	[2-O-methyl-alpha-L-fucopyranosyl-(1->3)-alpha-L-rhamnopyranosyl-(1->3)-2-O-methyl-alpha-L-rhamnopyranosyl] dimycocerosyl phenol-phthiocerol 4'''-O-methyltransferase	75.5	74.1	33.2
MGA_3858	LOCUS_38180	sequence001:4086603..4087361(+)	partial			WP_011392690.1	class I SAM-dependent methyltransferase	42.1	44.3	38.3
MGA_3867	LOCUS_38270	sequence001:4097090..4099090(-)	partial			WP_011204949.1	glycosyltransferase	29.7	47.4	30.9
MGA_3871	LOCUS_38310	sequence001:4102839..4103705(-)	partial			WP_012257358.1	WecB/TagA/CpsF family glycosyltransferase	57.6	32.9	38.0
MGA_3889	LOCUS_38490	sequence001:4121257..4121499(-)	partial			WP_011730538.1	RNA polymerase sigma-70 factor	85.0	22.6	52.9
MGA_3902	LOCUS_38610	sequence001:4136590..4137321(+)	partial			WP_236073176.1	DUF302 domain-containing protein	98.8	71.6	50.4
MGA_3919	LOCUS_38780	sequence001:4154688..4155044(+)	partial			WP_005110193.1	hypothetical protein	65.3	75.0	51.3
MGA_3928	LOCUS_38870	sequence001:4166775..4167044(+)	frameshift		4166754	WP_003409061.1	PPE family protein	98.9	19.0	65.9
MGA_3931	LOCUS_38900	sequence001:4168044..4168337(+)	partial			WP_003898765.1	PPE family protein	90.7	22.0	43.3
MGA_3939	LOCUS_38980	sequence001:4175879..4176979(-)	partial			WP_010903716.1	S9 family peptidase	36.9	18.1	36.5
MGA_3946	LOCUS_39050	sequence001:4180162..4181652(+)	partial			WP_011388984.1	esterase-like activity of phytase family protein	72.2	83.1	29.8
MGA_3959	LOCUS_39180	sequence001:4193806..4194060(-)	partial			WP_003405645.1	lipoprotein LpqV	100.0	60.4	66.7
MGA_3971	LOCUS_39300	sequence001:4205539..4206255(+)	partial			WP_003405732.1	RDD family protein	69.7	69.2	79.5
MGA_3978	LOCUS_39370	sequence001:4212137..4212379(+)	frameshift		4212092	WP_011730423.1	nuclear transport factor 2 family protein	100.0	63.7	47.6
MGA_3983	LOCUS_39420	sequence001:4216354..4216677(+)	internal_stop_codon	4216675..4216677(+)		WP_009939865.1	PE family protein	59.8	12.0	42.2
MGA_3984	LOCUS_39430	sequence001:4216699..4217106(+)	internal_stop_codon	4216675..4216677(+)		WP_009939865.1	PE family protein	29.6	7.5	80.0
MGA_3993	LOCUS_39520	sequence001:4225427..4226401(-)	partial			WP_003405804.1	hypothetical protein	74.4	80.5	66.4
MGA_4001	LOCUS_39600	sequence001:4232777..4233577(-)	partial			WP_011730666.1	aromatic ring-hydroxylating dioxygenase subunit alpha	65.4	39.8	36.8
MGA_4011	LOCUS_39700	sequence001:4243309..4244403(-)	partial			WP_197492561.1	hypothetical protein	45.9	43.5	64.7
MGA_4013	LOCUS_39720	sequence001:4246103..4246474(+)	partial			WP_011730389.1	hypothetical protein	65.9	72.3	45.7
MGA_4014	LOCUS_39730	sequence001:4246958..4247464(+)	partial			WP_003898733.1	hypothetical protein	71.4	51.7	88.3
MGA_4017	LOCUS_39760	sequence001:4248660..4249376(-)	frameshift		4249345	WP_003898734.1	hypothetical protein	97.5	81.1	83.6
MGA_4023	LOCUS_39820	sequence001:4254130..4254699(+)	frameshift		4254768,4254543	WP_003899846.1	YhgE/Pip domain-containing protein	72.0	30.1	49.3
MGA_4024	LOCUS_39830	sequence001:4254770..4255336(+)	frameshift		4254771,4254543	WP_003899846.1	YhgE/Pip domain-containing protein	88.8	36.9	47.9
MGA_4026	LOCUS_39850	sequence001:4255921..4256535(-)	partial			WP_010908039.1	TetR/AcrR family transcriptional regulator	30.4	45.3	75.8
MGA_4027	LOCUS_39860	sequence001:4256537..4257124(-)	partial			WP_003408979.1	type VII secretion system ESX-5 target PPE26	84.1	48.1	29.6
MGA_4032	LOCUS_39910	sequence001:4260580..4260903(-)	partial			WP_003900758.1	ISL3-like element IS1557 family transposase	94.4	22.7	53.5
MGA_4035	LOCUS_39940	sequence001:4263304..4264971(-)	partial			WP_010950491.1	PE family protein	22.0	14.4	63.1
MGA_4037	LOCUS_39960	sequence001:4266037..4266432(+)	partial			WP_235624337.1	hypothetical protein	78.6	51.9	50.0
MGA_4038	LOCUS_39970	sequence001:4266429..4267607(+)	frameshift		4267325	WP_011730516.1	radical SAM protein	76.5	57.5	77.3
MGA_4039	LOCUS_39980	sequence001:4267504..4267977(+)	frameshift		4267325	WP_011730516.1	radical SAM protein	99.4	30.1	73.2
MGA_4051	LOCUS_40100	sequence001:4279992..4281671(+)	partial			WP_011338147.1	VWA domain-containing protein	51.5	45.8	33.9
MGA_4056	LOCUS_40150	sequence001:4285736..4286752(+)	frameshift		4286743	WP_003403919.1	aldehyde dehydrogenase	96.4	66.3	54.1
MGA_4057	LOCUS_40160	sequence001:4286749..4287219(+)	frameshift		4286740	WP_013223303.1	aldehyde dehydrogenase	98.7	31.6	57.1
MGA_4061	LOCUS_40200	sequence001:4290100..4290432(+)	frameshift		4290420,4290429	WP_013225379.1	SRPBCC family protein	97.3	71.3	56.1
MGA_4062	LOCUS_40210	sequence001:4291227..4298588(-)	partial			WP_163682492.1	non-ribosomal peptide synthetase	80.3	35.2	62.4
MGA_4064	LOCUS_40230	sequence001:4298943..4299164(-)	partial			WP_005062145.1	MbtH family protein	74.0	71.1	74.1
MGA_4070	LOCUS_40290	sequence001:4304676..4305242(-)	frameshift		4305274	WP_003408181.1	type III polyketide synthase	100.0	53.3	50.8
MGA_4073	LOCUS_40320	sequence001:4306493..4307065(+)	frameshift		4307062	WP_011730370.1	NAD(P)H-binding protein	100.0	49.5	63.2
MGA_4074	LOCUS_40330	sequence001:4307067..4307531(+)	frameshift		4307062	WP_011730370.1	NAD(P)H-binding protein	91.6	36.2	51.1
MGA_4077	LOCUS_40360	sequence001:4309875..4310102(-)	frameshift		4309946	WP_003405957.1	enoyl-CoA hydratase	62.7	17.5	70.2
MGA_4088	LOCUS_40470	sequence001:4319246..4319764(-)	frameshift		4319762	WP_009936776.1	DUF1697 domain-containing protein	99.4	82.6	75.0
MGA_4093	LOCUS_40520	sequence001:4321322..4322416(-)	partial			WP_172591911.1	hypothetical protein	38.7	41.2	91.5
MGA_4094	LOCUS_40530	sequence001:4322464..4323111(-)	frameshift,internal_stop_codon	4322443..4322445(-)	4322493	WP_003406075.1	hypothetical protein	67.4	64.8	54.4
MGA_4106	LOCUS_40650	sequence001:4338346..4338930(+)	frameshift		4338340	WP_010886091.1	PE family protein	34.0	10.9	45.5
MGA_4109	LOCUS_40680	sequence001:4340115..4340456(+)	partial			WP_003406163.1	hypothetical protein	88.5	68.5	75.0
MGA_4121	LOCUS_40790	sequence001:4355460..4355903(+)	partial			WP_000561483.1	group II intron reverse transcriptase/maturase	88.4	27.8	34.1
MGA_4123	LOCUS_40810	sequence001:4356052..4357104(+)	partial			WP_010907604.1	hypothetical protein	14.0	60.5	61.2
MGA_4124	LOCUS_40820	sequence001:4357618..4358079(+)	partial			WP_003899482.1	IS607 family element RNA-guided endonuclease TnpB	91.5	30.3	44.4
MGA_4128	LOCUS_40850	sequence001:4362604..4362882(+)	frameshift		4362356,4362533	WP_013230869.1	lytic polysaccharide monooxygenase	97.8	38.6	52.6
MGA_4133	LOCUS_40900	sequence001:4368610..4368966(-)	partial			WP_011393845.1	TetR/AcrR family transcriptional regulator	66.1	39.6	34.6
MGA_4136	LOCUS_40930	sequence001:4370577..4370996(-)	frameshift		4371001,4370982	WP_013224382.1	OB-fold domain-containing protein	90.6	41.4	46.5
MGA_4137	LOCUS_40940	sequence001:4370996..4371538(-)	frameshift		4370985,4371004	WP_013224382.1	OB-fold domain-containing protein	88.3	50.3	47.2
MGA_4149	LOCUS_41060	sequence001:4386730..4393230(-)	partial			WP_011729886.1	non-ribosomal peptide synthetase	70.3	83.6	67.0
MGA_4153	LOCUS_41100	sequence001:4398570..4399310(+)	partial			WP_003899299.1	phenyloxazoline synthase MbtB	93.5	16.1	56.7
MGA_4165	LOCUS_41220	sequence001:4413361..4413735(+)	partial			WP_003406243.1	DivIVA domain-containing protein	74.2	75.4	75.0
MGA_4176	LOCUS_41320	sequence001:4423621..4423773(+)	partial			WP_011729639.1	LuxR C-terminal-related transcriptional regulator	90.0	5.2	64.4
MGA_4186	LOCUS_41420	sequence001:4432830..4433525(-)	partial			WP_010950507.1	DUF4190 domain-containing protein	32.9	38.4	75.0
MGA_4208	LOCUS_41640	sequence001:4463638..4465191(-)	partial			WP_010886177.1	PE family protein	13.9	12.3	65.3
MGA_4216	LOCUS_41720	sequence001:4473792..4475177(-)	frameshift		4475248	WP_011030279.1	cyclic Di-GMP phosphodiesterase RmdB	78.3	48.3	40.9
MGA_4217	LOCUS_41730	sequence001:4475087..4477060(-)	frameshift		4475326	WP_235190878.1	EAL domain-containing protein	29.2	25.6	43.3
MGA_4225	LOCUS_41810	sequence001:4483084..4483755(-)	partial			WP_010950514.1	serine/threonine-protein kinase PknH/PknJ	94.6	35.4	77.7
MGA_4226	LOCUS_41820	sequence001:4483710..4485197(-)	partial			WP_010886110.1	serine/threonine protein kinase PknH	59.2	46.8	90.1
MGA_4228	LOCUS_41840	sequence001:4485626..4485919(-)	partial			WP_030872986.1	FHA domain-containing protein	86.6	9.7	34.1
MGA_4231	LOCUS_41870	sequence001:4487820..4489244(-)	partial			WP_030872986.1	FHA domain-containing protein	74.7	40.9	35.0
MGA_4233	LOCUS_41890	sequence001:4490900..4491154(-)	partial			WP_010950774.1	IS607-like element IS1602 family transposase	69.0	30.1	89.7
MGA_4234	LOCUS_41900	sequence001:4491221..4492663(-)	partial			WP_030872986.1	FHA domain-containing protein	64.8	35.8	58.5
MGA_4235	LOCUS_41910	sequence001:4493003..4494793(-)	partial			WP_010886110.1	serine/threonine protein kinase PknH	70.8	68.4	71.2
MGA_4237	LOCUS_41930	sequence001:4496570..4497295(-)	partial			WP_003898800.1	C39 family peptidase	67.2	69.8	69.1
MGA_4242	LOCUS_41980	sequence001:4499701..4500036(-)	partial			WP_003406566.1	DUF732 domain-containing protein	68.5	67.3	73.7
MGA_4248	LOCUS_42040	sequence001:4505646..4505900(-)	frameshift		4506105	WP_003906521.1	HNH endonuclease signature motif containing protein	73.8	13.7	67.7
MGA_4250	LOCUS_42060	sequence001:4507832..4508533(+)	frameshift		4508523,4507659,4507815	WP_010950392.1	LuxR family transcriptional regulator	98.7	21.2	58.4
MGA_4251	LOCUS_42070	sequence001:4508524..4509945(+)	frameshift		4510096,4508521,4509793	WP_003401912.1	LuxR family transcriptional regulator	89.4	39.2	55.6
MGA_4252	LOCUS_42080	sequence001:4509870..4510115(+)	frameshift		4509792,4509802,4510095,4509738,4509775,4510239	WP_010950392.1	LuxR family transcriptional regulator	88.9	6.5	48.6
MGA_4253	LOCUS_42090	sequence001:4510191..4510592(+)	frameshift		4510094,4510238	WP_003401912.1	LuxR family transcriptional regulator	87.2	10.7	69.0
MGA_4267	LOCUS_42230	sequence001:4527105..4527956(+)	frameshift		4527752,4527971	WP_003911027.1	PE family protein	42.4	26.4	53.3
MGA_4285	LOCUS_42410	sequence001:4542093..4542626(-)	partial			WP_010950487.1	nucleotidyl transferase AbiEii/AbiGii toxin family protein	70.6	41.0	33.8
MGA_4322	LOCUS_42760	sequence001:4589332..4593777(-)	partial			WP_012256390.1	Stk1 family PASTA domain-containing Ser/Thr kinase	18.9	47.2	41.3
MGA_4336	LOCUS_42900	sequence001:4608536..4608838(+)	frameshift		4608603,4608477	WP_003974546.1	VOC family protein	82.0	57.4	64.6
MGA_4337	LOCUS_42910	sequence001:4609033..4609206(+)	partial			WP_017270030.1	DUF1801 domain-containing protein	96.5	37.9	74.5
MGA_4342	LOCUS_42960	sequence001:4612176..4612445(-)	partial			WP_003898833.1	hypothetical protein	98.9	71.4	77.8
MGA_4362	LOCUS_43160	sequence001:4632010..4633152(+)	frameshift		4633011	WP_011728260.1	cytochrome P450	87.9	81.3	71.0
MGA_4379	LOCUS_43330	sequence001:4647474..4648202(-)	partial			WP_003409061.1	PPE family protein	89.7	58.3	26.3
MGA_4385	LOCUS_43390	sequence001:4653896..4654912(-)	partial			WP_011728744.1	TetR/AcrR family transcriptional regulator	55.0	84.9	60.2
MGA_4397	LOCUS_43510	sequence001:4669440..4670180(-)	partial			WP_011228169.1	SDR family oxidoreductase	73.2	75.5	33.7
MGA_4408	LOCUS_43620	sequence001:4683253..4683687(+)	partial			WP_005064825.1	MaoC family dehydratase	66.7	73.8	40.6
MGA_4411	LOCUS_43650	sequence001:4686657..4687805(-)	partial			WP_010920958.1	aromatic ring-hydroxylating dioxygenase subunit alpha	48.4	46.5	35.4
MGA_4415	LOCUS_43690	sequence001:4698927..4700402(-)	internal_stop_codon	4698927..4698929(-)		WP_011728918.1	DUF2339 domain-containing protein	96.7	78.3	41.4
MGA_4422	LOCUS_43760	sequence001:4705780..4706007(+)	partial			WP_003896152.1	DUF3618 domain-containing protein	69.3	69.3	73.1
MGA_4425	LOCUS_43790	sequence001:4707982..4708752(-)	frameshift		4708155	WP_011815826.1	YcaO-like family protein	69.9	43.1	35.0
MGA_4429	LOCUS_43830	sequence001:4712844..4713350(+)	frameshift		4713272,4712839	WP_011730649.1	hypothetical protein	85.1	77.3	51.7
MGA_4433	LOCUS_43870	sequence001:4716408..4716617(-)	frameshift,internal_stop_codon	4716408..4716410(-)	4716386	WP_085976166.1	IS3 family transposase	95.7	17.3	56.1
MGA_4471	LOCUS_44240	sequence001:4762718..4764439(+)	partial			WP_010950791.1	PE family protein	20.6	19.2	60.2
MGA_4502	LOCUS_44550	sequence001:4800030..4800317(-)	partial			WP_011731589.1	aconitase/3-isopropylmalate dehydratase large subunit family protein	100.0	23.2	79.6
MGA_4521	LOCUS_44740	sequence001:4821521..4821943(-)	frameshift		4821960	WP_010886098.1	PecA family PE domain-processing aspartic protease	97.9	14.7	46.4
MGA_4522	LOCUS_44750	sequence001:4821940..4823058(-)	partial			WP_010886079.1	PE family protein	41.4	24.2	52.6
MGA_4523	LOCUS_44760	sequence001:4823046..4823783(-)	frameshift		4823932	WP_011727041.1	MMPL family transporter	79.2	20.1	78.4
MGA_4524	LOCUS_44770	sequence001:4824076..4824495(-)	frameshift		4824648,4823930,4824227,4824732	WP_011727041.1	MMPL family transporter	63.3	9.1	73.9
MGA_4526	LOCUS_44790	sequence001:4825112..4825369(-)	frameshift		4825126	WP_014876806.1	transport acessory protein MmpS	95.3	55.5	66.7
MGA_4539	LOCUS_44920	sequence001:4838585..4839997(-)	partial			WP_003901009.1	PE family protein	30.9	84.0	45.6
MGA_4546	LOCUS_44990	sequence001:4847173..4847613(-)	internal_stop_codon	4847635..4847637(-)		WP_011730217.1	FAD-dependent oxidoreductase	98.6	36.5	62.0
MGA_4547	LOCUS_45000	sequence001:4847635..4848354(-)	frameshift,internal_stop_codon	4847634..4847636(-)	4848300,4848279	WP_005110188.1	FAD-dependent oxidoreductase	93.7	53.0	59.4
MGA_4553	LOCUS_45060	sequence001:4853070..4853531(-)	partial			WP_003899482.1	IS607 family element RNA-guided endonuclease TnpB	91.5	30.3	45.1
MGA_4555	LOCUS_45070	sequence001:4853762..4854646(-)	frameshift,internal_stop_codon	4854679..4854681(-)	4854801	WP_005095711.1	FAD/NAD(P)-binding oxidoreductase	94.9	71.7	52.7
MGA_4556	LOCUS_45080	sequence001:4855275..4855511(-)	partial			WP_013227627.1	DUF6480 family protein	59.0	59.0	71.7
MGA_4561	LOCUS_45130	sequence001:4860120..4861055(+)	partial			WP_003911027.1	PE family protein	17.0	12.5	56.4
MGA_4573	LOCUS_45250	sequence001:4873611..4877006(-)	partial			WP_004537515.1	non-ribosomal peptide synthetase	55.5	59.4	30.9
MGA_4579	LOCUS_45310	sequence001:4885657..4886223(-)	partial			WP_003973221.1	GNAT family N-acetyltransferase	89.9	73.6	45.9
MGA_4586	LOCUS_45380	sequence001:4902466..4902912(-)	partial			WP_011974366.1	carboxymuconolactone decarboxylase family protein	77.0	73.9	27.0
MGA_4594	LOCUS_45450	sequence001:4910649..4911194(+)	partial			WP_014206709.1	dienelactone hydrolase family protein	95.0	39.9	48.8
MGA_4610	LOCUS_45600	sequence001:4924292..4925653(+)	partial			WP_010950703.1	PPE family protein	93.6	69.1	50.2
MGA_4612	LOCUS_45610	sequence001:4926171..4927814(+)	frameshift		4926042	WP_015288299.1	PPE family protein	93.2	72.3	39.6
MGA_4615	LOCUS_45640	sequence001:4928633..4929208(+)	partial			WP_003900505.1	PPE family protein	99.5	48.1	47.2
MGA_4618	LOCUS_45670	sequence001:4930237..4930779(+)	partial			WP_003900505.1	PPE family protein	96.7	44.0	47.8
MGA_4621	LOCUS_45700	sequence001:4934307..4934573(+)	partial			WP_003899285.1	phospholipase C	95.5	16.4	82.1
MGA_4655	LOCUS_46030	sequence001:4978842..4979612(+)	partial			WP_003406967.1	hypothetical protein	27.0	67.5	33.7
MGA_4656	LOCUS_46040	sequence001:4979729..4980040(+)	frameshift		4979935	WP_004083032.1	alpha-L-fucosidase	64.1	13.9	59.1
MGA_4657	LOCUS_46050	sequence001:4979926..4980519(+)	frameshift		4979935	WP_004083032.1	alpha-L-fucosidase	94.4	41.7	44.1
MGA_4658	LOCUS_46060	sequence001:4980507..4981181(+)	partial			WP_004083032.1	alpha-L-fucosidase	77.7	39.5	39.8
MGA_4665	LOCUS_46130	sequence001:4986788..4987015(-)	partial			WP_003414190.1	hypothetical protein	100.0	72.8	93.3
MGA_4667	LOCUS_46150	sequence001:4987770..4988036(-)	frameshift		4987781	WP_003409874.1	hypothetical protein	78.4	23.0	62.3
MGA_4668	LOCUS_46160	sequence001:4988275..4988694(-)	internal_stop_codon	4988275..4988277(-)		WP_193485703.1	creatininase family protein	92.1	45.2	49.2
MGA_4669	LOCUS_46170	sequence001:4989106..4990113(+)	partial			WP_009938544.1	PE family protein	35.2	15.2	55.9
MGA_4673	LOCUS_46210	sequence001:4991483..4991824(+)	internal_stop_codon	4991210..4991212(+)		WP_003405517.1	type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein	100.0	54.6	78.8
MGA_4676	LOCUS_46240	sequence001:4994588..4995037(-)	partial			WP_010870381.1	HIT family protein	66.4	76.0	29.3
MGA_4677	LOCUS_46250	sequence001:4995034..4995789(-)	partial			WP_003975543.1	DUF6430 domain-containing protein	79.7	43.2	34.8
MGA_4678	LOCUS_46260	sequence001:4996424..4996807(-)	partial			WP_003900464.1	HNH endonuclease signature motif containing protein	88.2	20.4	71.4
MGA_4681	LOCUS_46290	sequence001:4997924..4999834(-)	partial			WP_011730648.1	hypothetical protein	30.7	46.0	36.2
MGA_4683	LOCUS_46310	sequence001:5000525..5000854(-)	frameshift		5000801	WP_013230072.1	inositol monophosphatase family protein	71.6	29.3	48.7
MGA_4686	LOCUS_46330	sequence001:5002908..5003429(-)	partial			WP_005110336.1	site-specific integrase	97.1	43.2	66.1
MGA_4688	LOCUS_46350	sequence001:5004109..5005011(-)	frameshift		5004153	WP_004554541.1	DEAD/DEAH box helicase family protein	90.3	26.9	49.3
MGA_4690	LOCUS_46370	sequence001:5005305..5005979(-)	frameshift		5005321,5005996	WP_085976171.1	IS3 family transposase	92.9	49.8	46.0
MGA_4692	LOCUS_46390	sequence001:5006336..5007355(-)	frameshift		5007521	WP_004554541.1	DEAD/DEAH box helicase family protein	100.0	31.3	51.2
MGA_4693	LOCUS_46400	sequence001:5007285..5008100(-)	frameshift		5007521	WP_010918509.1	type I restriction endonuclease subunit R	71.2	19.4	42.9
MGA_4696	LOCUS_46430	sequence001:5008974..5009861(-)	partial			WP_015704239.1	restriction endonuclease subunit S	90.5	64.1	36.7
MGA_4697	LOCUS_46440	sequence001:5010425..5011006(+)	partial			WP_011730648.1	hypothetical protein	97.9	45.7	44.2
MGA_4707	LOCUS_46540	sequence001:5018698..5019144(+)	partial			WP_003899164.1	IS3 family transposase	90.5	66.7	66.7
MGA_4709	LOCUS_46560	sequence001:5020080..5021906(+)	frameshift		5021885,5021982	WP_011122418.1	VIT domain-containing protein	95.1	76.0	29.9
MGA_4710	LOCUS_46570	sequence001:5021891..5022958(+)	partial			WP_005077222.1	DUF4349 domain-containing protein	64.8	79.7	44.9
MGA_4711	LOCUS_46580	sequence001:5022965..5023669(-)	partial			WP_005114615.1	DUF4190 domain-containing protein	82.9	70.5	43.0
MGA_4712	LOCUS_46590	sequence001:5023855..5024229(+)	frameshift		5024175	WP_101528280.1	class I SAM-dependent methyltransferase	85.5	34.3	54.7
MGA_4713	LOCUS_46600	sequence001:5024226..5024771(+)	frameshift		5024175	WP_003420620.1	class I SAM-dependent methyltransferase	91.2	53.6	60.0
MGA_4714	LOCUS_46610	sequence001:5024776..5025333(+)	frameshift		5025303	WP_005079740.1	class I SAM-dependent methyltransferase	92.4	76.9	56.3
MGA_4715	LOCUS_46620	sequence001:5025597..5027987(-)	partial			WP_011390159.1	EAL domain-containing protein	72.2	45.0	45.9
MGA_4728	LOCUS_46750	sequence001:5042404..5043033(+)	partial			WP_011728664.1	SDR family NAD(P)-dependent oxidoreductase	69.4	54.9	64.8
MGA_4749	LOCUS_46950	sequence001:5063702..5064136(+)	partial			WP_013227286.1	cation-transporting P-type ATPase	80.6	13.1	61.2
MGA_4771	LOCUS_47170	sequence001:5085691..5086113(+)	internal_stop_codon	5086111..5086113(+),5086198..5086200(+),5086117..5086119(+)		WP_003898977.1	HNH endonuclease signature motif containing protein	83.6	25.8	55.6
MGA_4779	LOCUS_47250	sequence001:5093227..5093919(+)	frameshift		5093170,5093458	WP_003899254.1	hypothetical protein	33.5	31.3	67.5
MGA_4781	LOCUS_47270	sequence001:5095234..5095791(+)	partial			WP_005083497.1	TetR/AcrR family transcriptional regulator	68.1	62.1	29.8
MGA_4786	LOCUS_47320	sequence001:5100177..5100722(+)	partial			WP_013229251.1	TetR/AcrR family transcriptional regulator C-terminal domain-containing protein	59.7	52.5	39.1
MGA_4789	LOCUS_47350	sequence001:5103679..5104806(-)	partial			WP_013227909.1	DUF5685 family protein	87.7	71.0	46.9
MGA_4798	LOCUS_47440	sequence001:5113919..5116885(+)	partial			WP_010886125.1	PE domain-containing protein	32.0	31.2	73.7
MGA_4799	LOCUS_47450	sequence001:5117270..5117539(+)	frameshift		5117632,5117719,5117527,5117295	WP_221458180.1	IS982 family transposase	88.8	27.4	63.3
MGA_4809	LOCUS_47550	sequence001:5126256..5126822(-)	frameshift,internal_stop_codon	5126416..5126418(-)	5126848,5126419,5126229	WP_145764452.1	IS3 family transposase	70.2	33.1	41.8
MGA_4812	LOCUS_47580	sequence001:5128318..5129268(+)	frameshift		5128498	WP_005093260.1	wax ester/triacylglycerol synthase family O-acyltransferase	74.4	51.0	31.4
MGA_4813	LOCUS_47590	sequence001:5129417..5129794(-)	frameshift		5129440,5129846	WP_011404044.1	class I SAM-dependent methyltransferase	96.8	54.8	42.1
MGA_4815	LOCUS_47610	sequence001:5130309..5130554(+)	partial			WP_003407268.1	type II toxin-antitoxin system VapC family toxin	69.1	42.1	78.6
MGA_4816	LOCUS_47620	sequence001:5130640..5132247(+)	partial			WP_011405217.1	wax ester/triacylglycerol synthase family O-acyltransferase	43.7	49.9	37.7
MGA_4825	LOCUS_47710	sequence001:5144600..5144920(-)	frameshift		5144951	WP_011726830.1	1-acyl-sn-glycerol-3-phosphate acyltransferase	100.0	39.8	59.8
MGA_4829	LOCUS_47750	sequence001:5151533..5152825(-)	frameshift		5152824	WP_013227752.1	AMP-binding protein	99.3	63.5	41.9
MGA_4837	LOCUS_47830	sequence001:5161250..5161687(+)	partial			WP_011123284.1	YciI family protein	75.2	49.1	44.0
MGA_4840	LOCUS_47860	sequence001:5165392..5165835(-)	partial			WP_011705394.1	NAD(P)-binding protein	37.4	9.9	52.7
MGA_4843	LOCUS_47890	sequence001:5168622..5168915(-)	partial			WP_010950814.1	PPE family protein	70.1	15.9	53.5
MGA_4845	LOCUS_47910	sequence001:5169370..5171265(-)	partial			WP_011727491.1	bifunctional serine/threonine-protein kinase/transporter substrate-binding domain-containing protein	44.1	45.9	61.1
MGA_4847	LOCUS_47930	sequence001:5171638..5171922(-)	frameshift		5171664	WP_003914906.1	LuxR family transcriptional regulator	87.2	7.2	46.3
MGA_4849	LOCUS_47950	sequence001:5172782..5173411(-)	frameshift,internal_stop_codon	5172660..5172662(-)	5173257,5173233,5172782,5173383	WP_003914906.1	LuxR family transcriptional regulator	94.3	17.6	46.5
MGA_4850	LOCUS_47960	sequence001:5173820..5174716(-)	frameshift		5173962,5174325,5174422	WP_010950392.1	LuxR family transcriptional regulator	88.6	25.7	57.3
MGA_4855	LOCUS_48010	sequence001:5177544..5177858(+)	frameshift		5177801	WP_003414146.1	IS607-like element IS1602 family transposase	83.7	45.1	80.5
MGA_4861	LOCUS_48070	sequence001:5181594..5182538(+)	frameshift		5181601	WP_011084514.1	IS630-like element ISRj1 family transposase	89.5	73.7	28.9
MGA_4863	LOCUS_48090	sequence001:5183821..5184447(+)	partial			WP_003815252.1	methionine biosynthesis protein MetW	58.7	63.2	33.8
MGA_4864	LOCUS_48100	sequence001:5184416..5185411(-)	internal_stop_codon	5185412..5185414(-)		WP_013225339.1	FAD-dependent oxidoreductase	97.3	72.5	41.0
MGA_4865	LOCUS_48110	sequence001:5185412..5185780(-)	internal_stop_codon	5185412..5185414(-)		WP_013225339.1	FAD-dependent oxidoreductase	84.4	22.7	49.5
MGA_4867	LOCUS_48130	sequence001:5187170..5187550(-)	partial			WP_003403439.1	siderophore transporter accessory protein MmpS5	69.0	64.1	45.7
MGA_4873	LOCUS_48180	sequence001:5194149..5194547(-)	partial			WP_223495338.1	hypothetical protein	41.7	80.0	51.8
MGA_4892	LOCUS_48370	sequence001:5211243..5211560(-)	frameshift		5211594	WP_041179691.1	hypothetical protein	99.0	35.3	77.9
MGA_4910	LOCUS_48550	sequence001:5236261..5237667(+)	partial			WP_003400794.1	non-ribosomal peptide synthetase Nrp	77.4	14.3	67.7
MGA_4911	LOCUS_48560	sequence001:5237630..5239681(+)	partial			WP_003400794.1	non-ribosomal peptide synthetase Nrp	100.0	26.2	67.6
MGA_4920	LOCUS_48650	sequence001:5251230..5251364(+)	frameshift,internal_stop_codon	5251141..5251143(+)	5251152	WP_003899229.1	hypothetical protein	100.0	56.4	77.3
MGA_4940	LOCUS_48840	sequence001:5270312..5270500(+)	partial			WP_003892088.1	membrane protein	82.3	73.9	64.7
MGA_4944	LOCUS_48880	sequence001:5272895..5273119(+)	partial			WP_029104311.1	ATP-binding protein	71.6	15.4	56.6
MGA_4950	LOCUS_48940	sequence001:5277686..5278708(-)	partial			WP_003417421.1	PDZ-interacting protease regulator Ppr1	46.2	55.5	53.5
MGA_4991	LOCUS_49340	sequence001:5320720..5322495(-)	partial			WP_003411450.1	2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase	54.5	59.0	83.7
MGA_5000	LOCUS_49430	sequence001:5332099..5333439(-)	frameshift		5332257,5332179,5332115	WP_003899218.1	hypothetical protein	86.8	76.0	61.4
MGA_5035	LOCUS_49780	sequence001:5364678..5364911(+)	frameshift,internal_stop_codon	5365008..5365010(+),5364909..5364911(+)	5364664,5365040,5364971,5365082	WP_010950668.1	hypothetical protein	100.0	26.1	63.6
MGA_5054	LOCUS_49970	sequence001:5387763..5388515(+)	partial			WP_003411214.1	D,D-transpeptidase PbpB	100.0	36.8	89.2
MGA_5055	LOCUS_49980	sequence001:5388600..5389697(+)	partial			WP_010886133.1	PE family protein	33.4	23.7	51.6
MGA_5076	LOCUS_50190	sequence001:5421378..5422592(+)	frameshift,internal_stop_codon	5422590..5422592(+),5422821..5422823(+)	5422003,5422211,5421677,5422607	WP_003910308.1	PE family protein	24.5	17.6	54.5
MGA_5081	LOCUS_50240	sequence001:5425392..5425694(+)	partial			WP_003411107.1	hypothetical protein	100.0	74.5	84.3
MGA_5100	LOCUS_50430	sequence001:5445403..5445822(-)	frameshift,internal_stop_codon	5445867..5445869(-),5445957..5445959(-)	5445902	WP_003895361.1	thioesterase family protein	97.1	50.9	60.0
MGA_5101	LOCUS_50440	sequence001:5445957..5446208(-)	frameshift,internal_stop_codon	5445867..5445869(-),5445957..5445959(-)	5445908	WP_003895361.1	thioesterase family protein	100.0	31.3	78.3
MGA_5105	LOCUS_50480	sequence001:5448309..5448803(-)	partial			WP_003900470.1	hypothetical protein	77.4	67.2	66.9
MGA_5117	LOCUS_50600	sequence001:5458764..5458979(-)	partial			WP_003912345.1	HNH endonuclease signature motif containing protein	33.8	4.6	79.2
MGA_5129	LOCUS_50720	sequence001:5471878..5472279(-)	frameshift		5471919	WP_003410707.1	hypothetical protein	81.2	56.7	52.8
MGA_5130	LOCUS_50730	sequence001:5472436..5472897(-)	partial			WP_003899161.1	hypothetical protein	92.8	74.3	46.9
MGA_5131	LOCUS_50740	sequence001:5472974..5473759(-)	partial			WP_010950653.1	alpha/beta hydrolase	99.6	36.7	53.7
MGA_5132	LOCUS_50750	sequence001:5474075..5474533(-)	partial			WP_003899161.1	hypothetical protein	92.8	74.3	50.0
MGA_5134	LOCUS_50770	sequence001:5476597..5477589(-)	partial			WP_003900462.1	hypothetical protein	85.5	74.6	54.6
MGA_5137	LOCUS_50790	sequence001:5479188..5479478(+)	partial			WP_010886373.1	NADH-quinone oxidoreductase subunit M	80.2	15.7	42.9
MGA_5157	LOCUS_50980	sequence001:5504431..5505129(-)	frameshift		5505123	WP_010950655.1	DUF5631 domain-containing protein	99.1	31.9	69.1
MGA_5161	LOCUS_51020	sequence001:5508452..5510791(+)	partial			WP_011730306.1	EspA/EspE family type VII secretion system effector	72.3	72.3	38.3
MGA_5165	LOCUS_51060	sequence001:5513723..5515996(+)	frameshift,internal_stop_codon	5513681..5513683(+)	5513649,5515186,5515355	WP_003899759.1	outer membrane channel protein/necrotizing toxin glycohydrolase CpnT	99.6	83.8	34.4
MGA_5167	LOCUS_51080	sequence001:5517223..5517753(+)	partial			WP_003899158.1	hypothetical protein	93.2	34.3	74.3
MGA_5169	LOCUS_51100	sequence001:5519764..5520417(+)	frameshift		5519788	WP_003899158.1	hypothetical protein	86.6	38.6	76.1
MGA_5182	LOCUS_51220	sequence001:5534069..5534512(-)	frameshift		5534080	WP_003899118.1	PecA family PE domain-processing aspartic protease	77.6	20.3	51.8
MGA_5187	LOCUS_51270	sequence001:5540020..5540634(-)	partial			WP_005088797.1	hypothetical protein	59.3	38.5	32.2
MGA_5191	LOCUS_51310	sequence001:5543596..5545572(+)	frameshift,internal_stop_codon	5545558..5545560(+)	5545443	WP_003902238.1	apolipoprotein N-acyltransferase	89.7	66.4	72.6
MGA_5192	LOCUS_51320	sequence001:5545569..5546375(+)	frameshift,internal_stop_codon	5545558..5545560(+)	5546373,5545446	WP_003902238.1	apolipoprotein N-acyltransferase	98.1	29.9	81.7
MGA_5193	LOCUS_51330	sequence001:5546384..5546680(-)	partial			WP_003410601.1	RNA polymerase-binding protein RbpA	72.4	64.0	97.2
MGA_5203	LOCUS_51430	sequence001:5569976..5570149(+)	partial			WP_003891774.1	gluconokinase	94.7	31.8	48.1
MGA_5204	LOCUS_51440	sequence001:5570118..5570783(-)	partial			WP_011728928.1	DoxX family protein	95.5	72.5	55.0
MGA_5210	LOCUS_51500	sequence001:5574228..5575505(+)	partial			WP_015923292.1	ferritin-like domain-containing protein	51.1	59.5	30.8
MGA_5219	LOCUS_51580	sequence001:5584137..5584445(-)	internal_stop_codon	5584524..5584526(-),5584470..5584472(-)		WP_003410207.1	maleylpyruvate isomerase family mycothiol-dependent enzyme	99.0	47.4	80.2
MGA_5220	LOCUS_51590	sequence001:5584524..5584778(-)	internal_stop_codon	5584524..5584526(-),5584470..5584472(-)		WP_003410207.1	maleylpyruvate isomerase family mycothiol-dependent enzyme	75.0	29.6	74.6
MGA_5232	LOCUS_51710	sequence001:5591734..5591991(-)	partial			WP_013227516.1	cold shock domain-containing protein	74.1	20.3	45.3
MGA_5235	LOCUS_51740	sequence001:5594300..5595034(-)	partial			WP_075743291.1	GTP cyclohydrolase I FolE	66.8	78.0	47.6
MGA_5238	LOCUS_51770	sequence001:5596701..5597213(+)	frameshift		5596584	WP_013227026.1	UdgX family uracil-DNA binding protein	94.1	74.8	62.3
MGA_5251	LOCUS_51900	sequence001:5609050..5609595(+)	partial			WP_063921474.1	alpha/beta hydrolase fold domain-containing protein	68.5	38.3	42.4
MGA_5256	LOCUS_51950	sequence001:5613164..5613400(+)	frameshift		5613128	WP_003409780.1	type II toxin-antitoxin system antitoxin MazE5	100.0	62.4	92.3
MGA_5260	LOCUS_51990	sequence001:5615570..5616349(-)	partial			WP_149764772.1	site-specific integrase	96.5	60.7	29.1
MGA_5263	LOCUS_52020	sequence001:5617859..5618548(+)	partial			WP_044233703.1	SDR family oxidoreductase	93.4	74.6	43.3
MGA_5267	LOCUS_52060	sequence001:5620025..5620369(-)	partial			WP_003707683.1	tyrosine recombinase XerC	67.5	26.2	39.7
MGA_5270	LOCUS_52080	sequence001:5622027..5622221(-)	partial			WP_087902221.1	IS3-like element IS987 family transposase	89.1	13.6	91.2
MGA_5273	LOCUS_52110	sequence001:5623444..5624211(-)	frameshift		5624251	WP_013225340.1	PfkB family carbohydrate kinase	96.5	77.6	54.1
MGA_5277	LOCUS_52150	sequence001:5627816..5628793(+)	partial			WP_017869246.1	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase	64.3	43.2	30.7
MGA_5282	LOCUS_52200	sequence001:5634073..5634975(-)	frameshift		5634093	WP_011088844.1	FAD-dependent monooxygenase	97.3	56.2	67.1
MGA_5283	LOCUS_52210	sequence001:5635150..5636979(-)	frameshift		5637047	WP_011731383.1	ATP-dependent RNA helicase HrpA	99.2	45.7	67.1
MGA_5284	LOCUS_52220	sequence001:5636886..5639189(-)	frameshift		5637047	WP_005134001.1	ATP-dependent RNA helicase HrpA	87.9	51.3	76.3
MGA_5287	LOCUS_52250	sequence001:5641413..5643029(-)	partial			WP_010950639.1	PecA family PE domain-processing aspartic protease	54.5	54.7	56.9
MGA_5292	LOCUS_52300	sequence001:5648769..5649062(-)	frameshift		5649102	WP_003898800.1	C39 family peptidase	86.6	39.2	40.7
MGA_5293	LOCUS_52310	sequence001:5648998..5649513(-)	frameshift		5649102	WP_003898800.1	C39 family peptidase	63.7	47.4	42.1
MGA_5294	LOCUS_52320	sequence001:5649552..5649941(-)	frameshift		5649587,5649942	WP_011122968.1	NAD-dependent epimerase/dehydratase family protein	89.9	35.5	31.7
MGA_5295	LOCUS_52330	sequence001:5649859..5650566(-)	frameshift		5649945	WP_005112346.1	NAD(P)-dependent oxidoreductase	81.7	59.0	47.9
MGA_5298	LOCUS_52360	sequence001:5651822..5652379(+)	partial			WP_005479856.1	2,4'-dihydroxyacetophenone dioxygenase family protein	74.6	80.0	53.6
MGA_5306	LOCUS_52440	sequence001:5657525..5657926(-)	frameshift		5657650,5657475	WP_012257279.1	LLM class F420-dependent oxidoreductase	52.6	28.4	52.1
MGA_5312	LOCUS_52500	sequence001:5662438..5663472(+)	partial			WP_162496169.1	NADP-dependent oxidoreductase	96.2	74.6	49.5
MGA_5315	LOCUS_52530	sequence001:5664868..5665137(+)	partial			WP_003723640.1	elongation factor Tu	94.4	22.3	46.6
MGA_5331	LOCUS_52690	sequence001:5676944..5677228(+)	partial			WP_003409686.1	SDR family oxidoreductase	74.5	27.5	70.0
MGA_5348	LOCUS_52860	sequence001:5696422..5696730(-)	frameshift		5696747,5696381	WP_003900432.1	lysophospholipid acyltransferase family protein	81.4	30.3	85.1
MGA_5358	LOCUS_52960	sequence001:5710339..5710752(-)	frameshift		5710850,5710847	WP_010950946.1	NAD(P)/FAD-dependent oxidoreductase	100.0	25.9	67.6
MGA_5361	LOCUS_52990	sequence001:5711764..5712780(-)	partial			WP_003417421.1	PDZ-interacting protease regulator Ppr1	52.1	61.9	63.6
MGA_5362	LOCUS_53000	sequence001:5712948..5713661(+)	frameshift		5713290,5713605	WP_003899778.1	nitronate monooxygenase family protein	48.9	36.0	45.7
MGA_5363	LOCUS_53010	sequence001:5713610..5714134(+)	frameshift		5713604	WP_005112881.1	nitronate monooxygenase	97.7	53.0	44.1
MGA_5365	LOCUS_53030	sequence001:5714865..5715473(-)	frameshift,internal_stop_codon	5715576..5715578(-)	5715618	WP_005079788.1	long-chain fatty acid--CoA ligase	94.1	39.8	41.7
MGA_5379	LOCUS_53170	sequence001:5727675..5728181(+)	partial			WP_003905677.1	macro domain-containing protein	99.4	48.7	81.4
MGA_5385	LOCUS_53230	sequence001:5733750..5734556(+)	partial			WP_011727967.1	hypothetical protein	82.1	18.9	49.6
MGA_5386	LOCUS_53240	sequence001:5734683..5735669(+)	frameshift		5735624	WP_003899860.1	radical SAM protein	83.8	62.9	72.0
MGA_5387	LOCUS_53250	sequence001:5735638..5736105(+)	frameshift		5735627	WP_003899860.1	radical SAM protein	97.4	34.6	78.8
MGA_5394	LOCUS_53320	sequence001:5740127..5740954(+)	frameshift		5740930	WP_014877729.1	cytochrome P450	92.4	59.3	78.7
MGA_5395	LOCUS_53330	sequence001:5740954..5741424(+)	frameshift		5740930	WP_003419304.1	steroid C26-monooxygenase Cyp125	100.0	35.1	81.4
MGA_5397	LOCUS_53350	sequence001:5741866..5742483(+)	frameshift,internal_stop_codon	5741824..5741826(+)	5741708,5742357	WP_011729088.1	alcohol dehydrogenase catalytic domain-containing protein	78.5	47.9	69.1
MGA_5401	LOCUS_53390	sequence001:5745880..5746614(-)	frameshift,internal_stop_codon	5746643..5746645(-)	5746624,5746035	WP_011028271.1	IS200/IS605 family element transposase accessory protein TnpB	75.8	31.9	41.6
MGA_5402	LOCUS_53400	sequence001:5746643..5747503(-)	frameshift,internal_stop_codon	5746643..5746645(-)	5746630	WP_011028271.1	IS200/IS605 family element transposase accessory protein TnpB	99.7	51.8	50.2
MGA_5406	LOCUS_53440	sequence001:5750078..5750503(+)	internal_stop_codon	5750024..5750026(+),5750036..5750038(+)		WP_003409420.1	resuscitation-promoting factor RpfC	95.0	75.6	61.5
MGA_5411	LOCUS_53490	sequence001:5753902..5754312(+)	partial			WP_005082139.1	nuclear transport factor 2 family protein	80.9	74.3	64.5
MGA_5426	LOCUS_53640	sequence001:5765524..5765826(+)	frameshift		5765754,5765691	WP_011729178.1	endopeptidase La	77.0	10.4	55.6
MGA_5428	LOCUS_53660	sequence001:5766842..5767060(+)	partial			WP_003409380.1	nitroreductase family deazaflavin-dependent oxidoreductase	100.0	55.8	81.9
MGA_5443	LOCUS_53810	sequence001:5783507..5784535(-)	partial			WP_003409337.1	adhesin Apa	53.8	56.6	83.7
MGA_5486	LOCUS_54240	sequence001:5831753..5832100(-)	frameshift		5832044	WP_003893780.1	hemerythrin domain-containing protein	85.2	51.0	62.2
MGA_5487	LOCUS_54250	sequence001:5832039..5832329(-)	frameshift		5832044	WP_003893780.1	hemerythrin domain-containing protein	93.8	46.9	63.3
MGA_5524	LOCUS_54620	sequence001:5877414..5881652(+)	partial			WP_010950632.1	PPE family protein	100.0	61.5	31.8
MGA_5539	LOCUS_54760	sequence001:5895718..5896716(+)	frameshift		5895685	WP_013228884.1	alpha-ketoacid dehydrogenase subunit alpha/beta	92.8	46.8	52.1
MGA_5543	LOCUS_54800	sequence001:5899409..5900776(+)	partial			WP_011726824.1	aromatic ring-hydroxylating dioxygenase subunit alpha	43.1	48.5	34.5
MGA_5556	LOCUS_54930	sequence001:5910908..5911705(-)	frameshift		5911751	WP_003911638.1	sulfite oxidase	99.6	71.9	75.0
MGA_5557	LOCUS_54940	sequence001:5911686..5912015(-)	frameshift		5911751	WP_003911638.1	sulfite oxidase	84.4	25.1	62.0
MGA_5575	LOCUS_55050	sequence010:99..446(-)	partial			WP_174519559.1	cutinase family protein	60.0	32.5	63.8
MGA_5584	LOCUS_55070	sequence018:156..446(+)	partial			WP_164929392.1	IS3-like element ISGvi5 family transposase	82.3	20.5	47.0
MGA_5606	LOCUS_55100	sequence038:123..380(-)	partial			WP_011731410.1	SDR family NAD(P)-dependent oxidoreductase	87.1	28.8	54.1
MGA_5610	LOCUS_55140	sequence038:3225..3884(-)	frameshift		3918	WP_003407378.1	esterase PE16	99.5	31.8	46.6
MGA_5611	LOCUS_55150	sequence038:3778..4449(-)	partial			WP_003407378.1	esterase PE16	79.4	33.5	70.1
MGA_5613	LOCUS_55170	sequence038:5565..5795(+)	partial			WP_012804562.1	Rieske (2Fe-2S) protein	81.6	41.8	41.9
MGA_5614	LOCUS_55180	sequence038:5833..6072(-)	partial			WP_003407376.1	PucR family transcriptional regulator	97.5	18.5	76.9
MGA_5615	LOCUS_55190	sequence038:6056..6706(-)	partial			WP_003407376.1	PucR family transcriptional regulator	94.0	48.1	72.4
MGA_5632	LOCUS_55240	sequence052:62..>648(-)	partial			WP_041608957.1	transposase	36.6	24.6	39.4
MGA_5652	LOCUS_55270	sequence068:924..>1521(-)	partial			WP_003419253.1	3-oxosteroid 1-dehydrogenase	99.5	35.0	87.3
MGA_5657	LOCUS_55280	sequence072:320..553(-)	frameshift,internal_stop_codon	565..567(-)	573	WP_003419652.1	DEAD/DEAH box helicase	80.5	8.0	75.8
MGA_5658	LOCUS_55290	sequence072:682..3255(-)	partial			WP_010886091.1	PE family protein	15.2	21.5	62.3
MGA_5673	LOCUS_55320	sequence084:1..739(+)	partial			WP_003911742.1	alpha/beta hydrolase	68.6	25.0	51.8
MGA_5695	LOCUS_55450	sequence091:86..1279(+)	frameshift		1273	WP_013229302.1	IS4 family transposase	95.7	78.9	39.6
MGA_5697	LOCUS_55460	sequence092:98..1288(-)	partial			WP_011205758.1	phosphatidylserine decarboxylase family protein	52.5	47.1	32.1
MGA_5698	LOCUS_55470	sequence092:1421..1750(+)	frameshift		1633,1934	WP_011726947.1	hydrolase	65.1	21.5	63.4
MGA_5699	LOCUS_55480	sequence092:1994..2392(+)	frameshift		1934	WP_011726947.1	hydrolase	93.9	37.6	66.1
MGA_5704	LOCUS_55490	sequence097:27..530(-)	frameshift		600	WP_087902221.1	IS3-like element IS987 family transposase	88.0	35.7	57.0
MGA_5706	LOCUS_55500	sequence099:1..980(+)	frameshift		968,974	WP_013226861.1	non-ribosomal peptide synthetase	91.7	4.5	45.6
MGA_5719	LOCUS_55530	sequence110:442..759(+)	internal_stop_codon	757..759(+)		WP_000453500.1	IS110 family transposase	99.0	41.5	35.2
MGA_5720	LOCUS_55540	sequence110:802..1620(+)	internal_stop_codon	757..759(+)		WP_003900518.1	IS110 family transposase	92.3	75.4	44.8
MGA_5723	LOCUS_55550	sequence112:27..278(-)	partial			WP_001050566.1	LPXTG-anchored repetitive surface protein SasC	98.8	3.8	96.3
MGA_5729	LOCUS_55570	sequence119:61..666(-)	frameshift		706,189	WP_003410786.1	PE family protein	34.3	14.1	63.8
MGA_5732	LOCUS_55590	sequence120:343..837(-)	partial			WP_004195676.1	winged helix-turn-helix domain-containing protein	67.1	77.9	38.2
MGA_5736	LOCUS_55620	sequence121:2415..3482(+)	partial			WP_005110627.1	FtsK/SpoIIIE domain-containing protein	88.2	63.2	40.7
MGA_5737	LOCUS_55630	sequence122:123..419(-)	frameshift,internal_stop_codon	466..468(-)	462	WP_003414201.1	ExeA family protein	100.0	36.3	80.6
MGA_5761	LOCUS_55650	sequence144:188..>928(-)	partial			WP_087902221.1	IS3-like element IS987 family transposase	95.9	55.0	48.1
MGA_5768	LOCUS_55660	sequence150:807..1187(+)	frameshift		781	WP_013226879.1	IS3 family transposase	92.1	38.2	69.0
MGA_5778	LOCUS_55680	sequence159:1029..1469(+)	partial			WP_003419652.1	DEAD/DEAH box helicase	100.0	18.9	77.4
MGA_5781	LOCUS_55700	sequence160:506..1057(+)	partial			WP_003899409.1	hypothetical protein	55.2	74.8	50.5
MGA_5787	LOCUS_55760	sequence160:4730..5002(-)	frameshift		4988	WP_003900698.1	hypothetical protein	83.3	57.3	70.7
MGA_5788	LOCUS_55770	sequence160:5141..7210(-)	partial			WP_013230503.1	DUF3631 domain-containing protein	51.7	69.4	50.8
MGA_5804	LOCUS_55860	sequence168:2457..3569(+)	partial			WP_005090114.1	hypothetical protein	19.7	72.3	56.2
MGA_5810	LOCUS_55910	sequence170:460..864(+)	partial			WP_005086108.1	nitroreductase/quinone reductase family protein	47.0	41.7	38.1
MGA_5830	LOCUS_55950	sequence184:217..936(+)	partial			WP_011970904.1	tyrosine-type recombinase/integrase	93.7	73.3	48.7
MGA_5841	LOCUS_56010	sequence189:5791..>6913(-)	partial			WP_011727254.1	xanthine dehydrogenase family protein molybdopterin-binding subunit	100.0	51.3	64.9
MGA_5846	LOCUS_56060	sequence191:1045..2574(-)	partial			WP_003410786.1	PE family protein	29.7	30.5	59.6
MGA_5851	LOCUS_56070	sequence195:421..921(+)	partial			WP_003900758.1	ISL3-like element IS1557 family transposase	84.3	30.9	55.0
