{
    "type": "genome",
    "identifier": "GCF_002761755.1",
    "organism": "Roseateles chitinivorans",
    "title": "Roseateles chitinivorans",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Centre for Cellular and Molecular Biology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_002761755.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN07832637",
        "wgs_master": "PEOG00000000.1",
        "refseq_category": "reference genome",
        "taxid": "2917965",
        "species_taxid": "2917965",
        "organism_name": "Roseateles chitinivorans",
        "infraspecific_name": "strain=HWN-4",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2017/11/07",
        "asm_name": "ASM276175v1",
        "asm_submitter": "Centre for Cellular and Molecular Biology",
        "gbrs_paired_asm": "GCA_002761755.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/761/755/GCF_002761755.1_ASM276175v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "5738122",
        "genome_size_ungapped": "5738122",
        "gc_percent": "69.500000",
        "replicon_count": "0",
        "scaffold_count": "261",
        "contig_count": "261",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_002761755.1-RS_2024_07_29",
        "annotation_date": "2024-07-29",
        "total_gene_count": "5191",
        "protein_coding_gene_count": "5025",
        "non_coding_gene_count": "66",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2017-11-07",
    "dateModified": "2017-11-07",
    "datePublished": "2017-11-07",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Roseateles chitinivorans"
        ],
        "sample_taxid": [
            "2917965"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "India: Hyderabad"
        ],
        "sample_host_location_id": [],
        "data_size": "1.557 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 1.04,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "5738122",
        "Number of Sequences": "261",
        "Longest Sequences (bp)": "184534",
        "N50 (bp)": "61475",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "69.5",
        "Number of CDSs": "4839",
        "Average Protein Length": "340.7",
        "Coding Ratio (%)": "86.2",
        "Number of rRNAs": "3",
        "Number of tRNAs": "63",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Mitsuaria chitinivorans",
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                "species_taxid": 2917965,
                "relation_to_type": "type",
                "validated": true,
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            {
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                "status": "below_threshold"
            },
            {
                "organism_name": "Roseateles terrae",
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                "accession": "GCA_014192155.1",
                "taxid": 431060,
                "species_taxid": 431060,
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                "total_fragments": 1810,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pelomonas saccharophila",
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                "accession": "GCA_004342485.1",
                "taxid": 304,
                "species_taxid": 304,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.8424,
                "matched_fragments": 914,
                "total_fragments": 1810,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Rubrivivax benzoatilyticus",
                "strain": "strain=JA2",
                "accession": "GCA_000190375.2",
                "taxid": 316997,
                "species_taxid": 316997,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.3901,
                "matched_fragments": 679,
                "total_fragments": 1810,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Schlegelella thermodepolymerans",
                "strain": "strain=DSM 15344",
                "accession": "GCA_002933415.1",
                "taxid": 215580,
                "species_taxid": 215580,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.3813,
                "matched_fragments": 678,
                "total_fragments": 1810,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Schlegelella thermodepolymerans",
                "strain": "strain=DSM 15344",
                "accession": "GCA_015476235.1",
                "taxid": 215580,
                "species_taxid": 215580,
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                "validated": true,
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                "matched_fragments": 689,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Pelomonas puraquae",
                "strain": "strain=CCUG 52769",
                "accession": "GCA_002205845.1",
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                "species_taxid": 431059,
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                "status": "below_threshold"
            },
            {
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                "species_taxid": 316997,
                "relation_to_type": "type",
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                "matched_fragments": 709,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Ideonella azotifigens",
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                "species_taxid": 513160,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.1406,
                "matched_fragments": 570,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Ideonella dechloratans",
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                "accession": "GCA_021049305.1",
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                "ani": 80.1246,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paucibacter toxinivorans",
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                "taxid": 270368,
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                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Azohydromonas caseinilytica",
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Aquabacterium soli",
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                "accession": "GCA_003933735.1",
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                "ani": 79.0306,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Ramlibacter pinisoli",
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                "accession": "GCA_009758015.1",
                "taxid": 2682844,
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                "status": "below_threshold"
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            {
                "organism_name": "Hydrogenophaga crocea",
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                "taxid": 2716225,
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        "gtdb_result": [
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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    },
    "_bac2feature": {
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}