{ "type": "genome", "identifier": "GCF_002763455.1", "organism": "Lentibacillus sediminis", "title": "Lentibacillus sediminis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Shandong University at Weihai", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002763455.1", "bioproject": "PRJNA224116", "biosample": "SAMN07249126", "wgs_master": "NIXK00000000.1", "refseq_category": "reference genome", "taxid": "1940529", "species_taxid": "1940529", "organism_name": "Lentibacillus sediminis", "infraspecific_name": "strain=0W14", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/11/13", "asm_name": "ASM276345v1", "asm_submitter": "Shandong University at Weihai", "gbrs_paired_asm": "GCA_002763455.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/763/455/GCF_002763455.1_ASM276345v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3639803", "genome_size_ungapped": "3639803", "gc_percent": "45.000000", "replicon_count": "0", "scaffold_count": "34", "contig_count": "34", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002763455.1-RS_2024_03_28", "annotation_date": "2024-03-28", "total_gene_count": "3696", "protein_coding_gene_count": "3566", "non_coding_gene_count": "77", "pubmed_id": "28895514" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-11-13", "dateModified": "2017-11-13", "datePublished": "2017-11-13", "_annotation": { "sample_count": 1, "sample_organism": [ "Lentibacillus sediminis" ], "sample_taxid": [ "1940529" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"below_threshold" }, { "organism_name": "Virgibacillus oceani", "strain": "strain=CGMCC 1.12754", "accession": "GCA_014638995.1", "taxid": 1479511, "species_taxid": 1479511, "relation_to_type": "type", "validated": true, "ani": 77.1704, "matched_fragments": 96, "total_fragments": 1197, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Virgibacillus ihumii", "strain": "strain=Marseille-Q1233", "accession": "GCA_902726655.1", "taxid": 2686091, "species_taxid": 2686091, "relation_to_type": "type", "validated": true, "ani": 77.1645, "matched_fragments": 102, "total_fragments": 1197, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Virgibacillus profundi", "strain": "strain=P3-H5", "accession": "GCA_002287375.1", "taxid": 2024555, "species_taxid": 2024555, "relation_to_type": "type", "validated": true, "ani": 77.0597, "matched_fragments": 150, "total_fragments": 1197, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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"N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_902726655.1", "gtdb_species": "s__Lentibacillus ihumii", "ani": 77.1664, "matched_fragments": 101, "total_fragments": 1197, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_D;f__Amphibacillaceae;g__Lentibacillus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014638995.1", "gtdb_species": "s__Virgibacillus_E oceani", "ani": 77.1485, "matched_fragments": 96, "total_fragments": 1197, "gtdb_taxonomy": "d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales_D;f__Amphibacillaceae;g__Virgibacillus_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", 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