{ "type": "genome", "identifier": "GCF_002797555.1", "organism": "Hymenobacter chitinivorans DSM 11115", "title": "Hymenobacter chitinivorans DSM 11115", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002797555.1", "bioproject": "PRJNA224116", "biosample": "SAMN07621067", "wgs_master": "PGFA00000000.1", "refseq_category": "reference genome", "taxid": "1121954", "species_taxid": "89969", "organism_name": "Hymenobacter chitinivorans DSM 11115", "infraspecific_name": "strain=DSM 11115", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/11/28", "asm_name": "ASM279755v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_002797555.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/797/555/GCF_002797555.1_ASM279755v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5870407", "genome_size_ungapped": "5870407", "gc_percent": "61.000000", "replicon_count": "0", "scaffold_count": "7", "contig_count": "7", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002797555.1-RS_2024_10_22", "annotation_date": "2024-10-22", "total_gene_count": "4949", "protein_coding_gene_count": "4897", "non_coding_gene_count": "45", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-11-28", "dateModified": "2017-11-28", "datePublished": "2017-11-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Hymenobacter chitinivorans DSM 11115" ], "sample_taxid": [ "1121954" ], "sample_host_organism": [ "not 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hymenobacter metallilatus", "strain": "strain=9PBR-2", "accession": "GCA_003944705.1", "taxid": 2493666, "species_taxid": 2493666, "relation_to_type": "type", "validated": true, "ani": 80.1885, "matched_fragments": 932, "total_fragments": 1954, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hymenobacter armeniacus", "strain": "strain=BT189", "accession": "GCA_014699055.1", "taxid": 2771358, "species_taxid": 2771358, "relation_to_type": "type", "validated": true, "ani": 79.5065, "matched_fragments": 920, "total_fragments": 1954, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hymenobacter citatus", "strain": "strain=BT507", "accession": "GCA_014333615.1", "taxid": 2763506, "species_taxid": 2763506, "relation_to_type": "type", "validated": true, "ani": 79.1396, "matched_fragments": 756, "total_fragments": 1954, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hymenobacter montanus", "strain": "strain=BT664", "accession": "GCA_014699115.1", "taxid": 2771359, "species_taxid": 2771359, "relation_to_type": "type", "validated": true, "ani": 78.3794, "matched_fragments": 656, "total_fragments": 1954, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002797555.1", "gtdb_species": "s__Hymenobacter chitinivorans", "ani": 100.0, "matched_fragments": 1954, "total_fragments": 1954, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Cytophagales;f__Hymenobacteraceae;g__Hymenobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_004765605.1", "gtdb_species": "s__Hymenobacter aquaticus", "ani": 87.2329, 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