{ "type": "genome", "identifier": "GCF_002797775.1", "organism": "Glutamicibacter mysorens", "title": "Glutamicibacter mysorens", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002797775.1", "bioproject": "PRJNA224116", "biosample": "SAMN04489744", "wgs_master": "PGEY00000000.1", "refseq_category": "reference genome", "taxid": "257984", "species_taxid": "257984", "organism_name": "Glutamicibacter mysorens", "infraspecific_name": "strain=DSM 12798", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/11/28", "asm_name": "ASM279777v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_002797775.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/797/775/GCF_002797775.1_ASM279777v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3459735", "genome_size_ungapped": "3459735", "gc_percent": "62.000000", "replicon_count": "0", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002797775.1-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "3272", "protein_coding_gene_count": "3154", "non_coding_gene_count": "86", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-11-28", "dateModified": "2017-11-28", "datePublished": "2017-11-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Glutamicibacter mysorens" ], "sample_taxid": [ "257984" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"below_threshold" }, { "organism_name": "Glutamicibacter mishrai", "strain": "strain=S5-52", "accession": "GCA_012221945.1", "taxid": 1775880, "species_taxid": 1775880, "relation_to_type": "type", "validated": true, "ani": 83.7522, "matched_fragments": 728, "total_fragments": 1153, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Glutamicibacter protophormiae", "strain": "strain=DSM 20168", "accession": "GCA_017876615.1", "taxid": 37930, "species_taxid": 37930, "relation_to_type": "type", "validated": true, "ani": 83.0842, "matched_fragments": 736, "total_fragments": 1153, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Glutamicibacter halophytocola", "strain": "strain=KLBMP 5180", "accession": "GCA_001302565.1", "taxid": 1933880, "species_taxid": 1933880, "relation_to_type": "type", "validated": true, "ani": 83.0606, "matched_fragments": 743, "total_fragments": 1153, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Glutamicibacter protophormiae", "strain": "strain=JCM 1973", "accession": "GCA_014647495.1", "taxid": 37930, "species_taxid": 37930, "relation_to_type": "type", "validated": true, "ani": 82.9617, "matched_fragments": 739, "total_fragments": 1153, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter mobilis", "strain": "strain=E918", "accession": "GCA_012395835.1", "taxid": 2724944, "species_taxid": 2724944, "relation_to_type": "type", "validated": true, "ani": 78.1702, "matched_fragments": 296, "total_fragments": 1153, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter sedimenti", "strain": "strain=MIC A30", "accession": "GCA_011750795.2", "taxid": 2694931, "species_taxid": 2694931, "relation_to_type": "type", "validated": true, "ani": 78.0793, "matched_fragments": 185, "total_fragments": 1153, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Georgenia yuyongxinii", "strain": "strain=Z443", 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"GCF_006539525.1", "gtdb_species": "s__Glutamicibacter nicotianae", "ani": 97.732, "matched_fragments": 983, "total_fragments": 1153, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Glutamicibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.59", "min_intra_species_ani": "96.22", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.85", "num_clustered_genomes": 10, "status": "conclusive" }, { "accession": "GCF_002979865.1", "gtdb_species": "s__Glutamicibacter sp002979865", "ani": 88.3153, "matched_fragments": 963, "total_fragments": 1153, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Glutamicibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.88", "min_intra_species_ani": "98.56", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.92", "num_clustered_genomes": 3, "status": "-" }, { "accession": 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"gtdb_species": "s__Glutamicibacter soli", "ani": 83.369, "matched_fragments": 734, "total_fragments": 1153, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Glutamicibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.33", "min_intra_species_ani": "97.69", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.87", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_001302565.1", "gtdb_species": "s__Glutamicibacter halophytocola", "ani": 83.109, "matched_fragments": 744, "total_fragments": 1153, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Glutamicibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.28", "min_intra_species_ani": "98.01", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.89", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_014647495.1", "gtdb_species": 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