{ "tc_result": [ { "organism_name": "Pseudomonas tolaasii", "strain": "strain=NCPPB 2192", "accession": "GCA_002813445.1", "taxid": 29442, "species_taxid": 29442, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2261, "total_fragments": 2264, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudomonas tolaasii", "strain": "strain=CCUG 23369", "accession": "GCA_008801395.1", "taxid": 29442, "species_taxid": 29442, "relation_to_type": "type", "validated": true, "ani": 99.9913, "matched_fragments": 2218, "total_fragments": 2264, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudomonas tolaasii", "strain": "", "accession": "GCA_900625075.1", "taxid": 29442, "species_taxid": 29442, "relation_to_type": "type", "validated": true, "ani": 99.9855, "matched_fragments": 2229, "total_fragments": 2264, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Pseudomonas azotoformans", "strain": "strain=NBRC 12693", 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas asgharzadehiana", "strain": "strain=SWRI132", "accession": "GCA_019139815.1", "taxid": 2842349, "species_taxid": 2842349, "relation_to_type": "type", "validated": true, "ani": 87.5792, "matched_fragments": 1506, "total_fragments": 2264, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas spelaei", "strain": "strain=CCM 7893", "accession": "GCA_009724245.1", "taxid": 1055469, "species_taxid": 1055469, "relation_to_type": "type", "validated": true, "ani": 85.8831, "matched_fragments": 1513, "total_fragments": 2264, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudomonas karstica", "strain": "strain=CCM 7891", "accession": "GCA_009707515.1", "taxid": 1055468, "species_taxid": 1055468, "relation_to_type": "type", "validated": true, "ani": 84.9673, "matched_fragments": 1342, "total_fragments": 2264, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_002813445.1", "gtdb_species": "s__Pseudomonas_E tolaasii", "ani": 100.0, "matched_fragments": 2262, "total_fragments": 2264, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.61", "min_intra_species_ani": "99.17", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.93", "num_clustered_genomes": 14, "status": "conclusive" }, { "accession": "GCF_002022275.1", "gtdb_species": "s__Pseudomonas_E fluorescens_AJ", "ani": 90.1306, "matched_fragments": 1812, "total_fragments": 2264, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", 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"N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003097075.1", "gtdb_species": "s__Pseudomonas_E sp003097075", "ani": 88.6201, "matched_fragments": 1586, "total_fragments": 2264, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.77", "min_intra_species_ani": "98.77", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.94", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_005938045.2", "gtdb_species": "s__Pseudomonas_E sp005938045", "ani": 88.6191, "matched_fragments": 1725, "total_fragments": 2264, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.18", "min_intra_species_ani": "95.16", "mean_intra_species_af": "0.86", 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"min_intra_species_af": "0.87", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_013385825.1", "gtdb_species": "s__Pseudomonas_E reactans", "ani": 88.3228, "matched_fragments": 1668, "total_fragments": 2264, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.45", "min_intra_species_ani": "96.30", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.87", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_001647715.1", "gtdb_species": "s__Pseudomonas_E antarctica_A", "ani": 88.2677, "matched_fragments": 1706, "total_fragments": 2264, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.45", "min_intra_species_ani": "97.45", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_900215245.1", "gtdb_species": "s__Pseudomonas_E fluorescens", "ani": 88.1746, "matched_fragments": 1652, "total_fragments": 2264, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.68", "min_intra_species_ani": "99.25", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.92", "num_clustered_genomes": 14, "status": "-" }, { "accession": "GCF_000503215.1", "gtdb_species": "s__Pseudomonas_E canadensis", "ani": 88.1745, "matched_fragments": 1617, "total_fragments": 2264, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.83", "min_intra_species_ani": "97.74", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.91", "num_clustered_genomes": 12, "status": "-" }, { "accession": "GCF_001870465.1", "gtdb_species": "s__Pseudomonas_E extremorientalis", "ani": 88.1519, "matched_fragments": 1618, "total_fragments": 2264, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.37", "min_intra_species_ani": "98.13", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.89", "num_clustered_genomes": 29, "status": "-" }, { "accession": "GCF_900111895.1", "gtdb_species": "s__Pseudomonas_E simiae", "ani": 88.0314, "matched_fragments": 1583, "total_fragments": 2264, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.45", "min_intra_species_ani": "99.32", "mean_intra_species_af": "0.95", 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"min_intra_species_af": "0.92", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_004519405.1", "gtdb_species": "s__Pseudomonas_E sp004519405", "ani": 87.4688, "matched_fragments": 1562, "total_fragments": 2264, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.60", "min_intra_species_ani": "98.40", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.92", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_000263715.2", "gtdb_species": "s__Pseudomonas_E synxantha_A", "ani": 87.3467, "matched_fragments": 1558, "total_fragments": 2264, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.66", "min_intra_species_ani": "97.33", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.88", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_002934065.1", "gtdb_species": "s__Pseudomonas_E orientalis_A", "ani": 87.3406, "matched_fragments": 1500, "total_fragments": 2264, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Pseudomonadales;f__Pseudomonadaceae;g__Pseudomonas_E", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.15", "min_intra_species_ani": "95.96", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.83", "num_clustered_genomes": 21, "status": "-" } ] }