{ "type": "genome", "identifier": "GCF_002814055.1", "organism": "Polaribacter reichenbachii", "title": "Polaribacter reichenbachii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Atmosphere and Ocean Research Institute, The University of Tokyo", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002814055.1", "bioproject": "PRJNA224116", "biosample": "SAMN06133461", "wgs_master": "na", "refseq_category": "na", "taxid": "996801", "species_taxid": "996801", "organism_name": "Polaribacter reichenbachii", "infraspecific_name": "strain=KCTC 23969", "isolate": "na", "version_status": "latest", "assembly_level": "Chromosome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2017/12/07", "asm_name": "ASM281405v1", "asm_submitter": "Atmosphere and Ocean Research Institute, The University of Tokyo", "gbrs_paired_asm": "GCA_002814055.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/814/055/GCF_002814055.1_ASM281405v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4122594", "genome_size_ungapped": "4081294", "gc_percent": "29.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002814055.1-RS_2024_07_25", "annotation_date": "2024-07-25", "total_gene_count": "3521", "protein_coding_gene_count": "3464", "non_coding_gene_count": "38", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2017-12-07", "dateModified": "2017-12-07", "datePublished": "2017-12-07", "_annotation": { "sample_count": 1, "sample_organism": [ "Polaribacter reichenbachii" ], "sample_taxid": [ "996801" ], "sample_host_organism": [ "Ulva fenestrata 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"status": "below_threshold" }, { "organism_name": "Polaribacter batillariae", "strain": "strain=G4M1", "accession": "GCA_017498485.1", "taxid": 2808900, "species_taxid": 2808900, "relation_to_type": "type", "validated": true, "ani": 79.8694, "matched_fragments": 628, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tenacibaculum todarodis", "strain": "strain=LPB0136", "accession": "GCA_001889045.1", "taxid": 1850252, "species_taxid": 1850252, "relation_to_type": "type", "validated": true, "ani": 79.6171, "matched_fragments": 493, "total_fragments": 1374, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_001975665.1", "gtdb_species": "s__Polaribacter reichenbachii", "ani": 99.9674, "matched_fragments": 1369, "total_fragments": 1374, "gtdb_taxonomy": 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