# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_3	LOCUS_00030	sequence1:770..1111(+)	frameshift		1096,786	WP_011459230.1	BREX-1 system adenine-specific DNA-methyltransferase PglX	47.8	4.6	53.7
MGA_4	LOCUS_00040	sequence1:1119..3065(+)	frameshift		3179,1108,3038	WP_011022345.1	BREX-1 system adenine-specific DNA-methyltransferase PglX	96.6	53.1	38.0
MGA_5	LOCUS_00050	sequence1:3193..4209(+)	frameshift		3161,3062	WP_011459230.1	BREX-1 system adenine-specific DNA-methyltransferase PglX	95.6	30.0	43.1
MGA_7	LOCUS_00070	sequence1:5609..7594(-)	frameshift		5620,5518	WP_010939304.1	BREX-1 system adenine-specific DNA-methyltransferase PglX	91.1	50.4	34.4
MGA_8	LOCUS_00080	sequence1:8031..9326(+)	partial			WP_011459232.1	BREX-1 system phosphatase PglZ type A	95.1	48.6	21.1
MGA_9	LOCUS_00090	sequence1:9466..10548(+)	partial			WP_011459232.1	BREX-1 system phosphatase PglZ type A	95.3	40.2	31.5
MGA_27	LOCUS_00270	sequence1:30231..31181(+)	frameshift		31133	WP_011101700.1	endonuclease MutS2	95.3	38.5	46.5
MGA_28	LOCUS_00280	sequence1:31196..32584(+)	frameshift		31136	WP_011674280.1	endonuclease MutS2	99.8	58.9	55.5
MGA_32	LOCUS_00320	sequence1:34434..35033(+)	partial			WP_002369622.1	ribonuclease PH	98.5	43.5	58.4
MGA_33	LOCUS_00330	sequence1:35100..35510(+)	partial			WP_003702923.1	DUF948 domain-containing protein	69.1	64.4	42.6
MGA_36	LOCUS_00360	sequence1:36055..36459(-)	partial			WP_010922631.1	helix-turn-helix transcriptional regulator	100.0	68.7	35.5
MGA_46	LOCUS_00460	sequence1:47482..48030(+)	partial			WP_003574160.1	YutD family protein	84.1	73.4	45.2
MGA_65	LOCUS_00630	sequence1:67079..67699(+)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	61.2
MGA_74	LOCUS_00720	sequence1:77742..78449(+)	partial			WP_011254096.1	APC family permease	100.0	44.3	52.8
MGA_75	LOCUS_00730	sequence1:78485..79105(-)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	60.7
MGA_77	LOCUS_00750	sequence1:79945..80865(+)	partial			WP_001030720.1	APC family permease	92.5	52.1	45.1
MGA_97	LOCUS_00950	sequence1:98120..98986(-)	partial			WP_011250348.1	glycerophosphodiester phosphodiesterase family protein	35.1	40.7	29.7
MGA_104	LOCUS_01020	sequence1:105307..105630(-)	partial			WP_012804602.1	metalloregulator ArsR/SmtB family transcription factor	90.7	66.2	34.0
MGA_110	LOCUS_01080	sequence1:113515..114075(-)	partial			WP_043926054.1	YitT family protein	93.0	62.3	44.5
MGA_111	LOCUS_01090	sequence1:114332..115090(+)	partial			WP_003563024.1	hydrolase	35.3	39.0	76.4
MGA_139	LOCUS_01370	sequence1:143866..144567(+)	partial			WP_003563024.1	hydrolase	60.9	62.3	47.9
MGA_146	LOCUS_01440	sequence1:153950..154114(+)	partial			WP_011254238.1	VanZ family protein	83.3	22.5	64.4
MGA_149	LOCUS_01470	sequence1:155888..156466(+)	frameshift		156427,155933	WP_011674713.1	IS30 family transposase	77.1	53.6	49.7
MGA_151	LOCUS_01490	sequence1:157576..158454(+)	partial			WP_011674962.1	IS110 family transposase	99.0	72.5	52.4
MGA_162	LOCUS_01600	sequence1:171346..171966(-)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	61.2
MGA_183	LOCUS_01810	sequence1:195624..196607(+)	frameshift		196514	WP_010990068.1	glycoside hydrolase family 3 N-terminal domain-containing protein	91.4	37.6	49.2
MGA_184	LOCUS_01820	sequence1:196532..197911(+)	frameshift		196514	WP_010990068.1	glycoside hydrolase family 3 N-terminal domain-containing protein	92.8	56.3	42.6
MGA_212	LOCUS_02100	sequence1:220815..221609(+)	partial			WP_011101964.1	DNA/RNA non-specific endonuclease	84.1	70.4	53.6
MGA_220	LOCUS_02180	sequence1:227992..229158(+)	partial			WP_011101195.1	cation:proton antiporter	97.7	63.6	48.6
MGA_238	LOCUS_02360	sequence1:247151..247483(-)	frameshift		247463	WP_011102068.1	hypothetical protein	85.5	30.9	50.0
MGA_239	LOCUS_02370	sequence1:247461..248054(-)	frameshift		247463	WP_011102068.1	hypothetical protein	100.0	65.1	57.8
MGA_247	LOCUS_02450	sequence1:255433..256245(-)	partial			WP_003587710.1	DNA/RNA non-specific endonuclease	74.8	69.6	63.4
MGA_273	LOCUS_02710	sequence1:282639..282851(+)	partial			WP_003564959.1	F0F1 ATP synthase subunit C	74.3	74.3	75.0
MGA_313	LOCUS_03110	sequence1:320122..320820(+)	partial			WP_011674452.1	FtsQ-type POTRA domain-containing protein	87.1	71.1	44.1
MGA_345	LOCUS_03430	sequence1:352764..353030(+)	partial			WP_003605069.1	YlbG family protein	81.8	61.0	50.0
MGA_349	LOCUS_03470	sequence1:355260..355796(+)	partial			WP_003546852.1	helix-hairpin-helix domain-containing protein	83.1	69.6	43.8
MGA_384	LOCUS_03820	sequence1:394257..394619(+)	internal_stop_codon	394617..394619(+)		WP_003642201.1	GGDEF domain-containing protein	100.0	31.9	53.3
MGA_385	LOCUS_03830	sequence1:394749..395384(+)	internal_stop_codon	394617..394619(+)		WP_003642201.1	GGDEF domain-containing protein	99.1	55.6	63.6
MGA_422	LOCUS_04200	sequence1:429996..430274(+)	partial			WP_100190734.1	IS3 family transposase	93.5	16.5	32.6
MGA_424	LOCUS_04220	sequence1:430864..431436(+)	partial			WP_011861841.1	fructose-specific PTS transporter subunit EIIC	74.7	22.5	28.7
MGA_436	LOCUS_04340	sequence1:444921..447248(+)	partial			WP_011109145.1	beta-galactosidase	48.4	54.7	31.8
MGA_468	LOCUS_04660	sequence1:482698..483810(-)	partial			WP_000564876.1	YSIRK-targeted surface antigen transcriptional regulator	57.6	53.9	29.6
MGA_484	LOCUS_04820	sequence1:495875..496570(+)	partial			WP_003547135.1	DNA-processing protein DprA	91.3	74.4	54.2
MGA_506	LOCUS_05040	sequence1:520766..521245(-)	partial			WP_003549932.1	glucose PTS transporter subunit IIA	91.8	22.2	49.7
MGA_509	LOCUS_05070	sequence1:522321..522803(+)	frameshift		522288	WP_002262757.1	TetR/AcrR family transcriptional regulator	96.9	71.8	34.6
MGA_524	LOCUS_05220	sequence1:537137..537382(+)	partial			WP_011817250.1	aldo/keto reductase	59.3	14.5	62.5
MGA_526	LOCUS_05240	sequence1:539250..540158(+)	partial			WP_014206418.1	LysR family transcriptional regulator	33.8	35.9	29.6
MGA_535	LOCUS_05330	sequence1:548171..549055(+)	partial			WP_003641738.1	MFS transporter	99.7	74.8	41.3
MGA_560	LOCUS_05580	sequence1:573288..575690(-)	partial			WP_001126259.1	carbamoyl-phosphate synthase large subunit	71.6	55.9	26.8
MGA_577	LOCUS_05750	sequence1:594296..595261(+)	partial			WP_012583944.1	AraC family transcriptional regulator	32.4	36.2	28.8
MGA_580	LOCUS_05780	sequence1:596854..599133(-)	partial			WP_011108335.1	glycoside hydrolase family 78 protein	90.9	64.8	22.3
MGA_592	LOCUS_05900	sequence1:613099..613350(-)	partial			WP_054643739.1	family 78 glycoside hydrolase catalytic domain	55.4	8.8	78.3
MGA_637	LOCUS_06350	sequence1:665291..665854(+)	frameshift		665800	WP_003640684.1	pyruvate, water dikinase regulatory protein	88.8	61.0	54.2
MGA_638	LOCUS_06360	sequence1:665886..666110(+)	frameshift		665800	WP_003547712.1	pyruvate, water dikinase regulatory protein	97.3	25.9	61.1
MGA_665	LOCUS_06630	sequence1:689827..690129(-)	partial			WP_002287741.1	ABC transporter ATP-binding protein	68.0	27.5	67.6
MGA_668	LOCUS_06660	sequence1:694556..694981(+)	partial			WP_003644468.1	ABC transporter permease	98.6	55.6	51.1
MGA_678	LOCUS_06760	sequence1:706801..707421(+)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	61.2
MGA_689	LOCUS_06870	sequence1:718149..719018(-)	frameshift		719013	WP_011101131.1	GH25 family lysozyme	35.6	27.7	59.4
MGA_690	LOCUS_06880	sequence1:719002..719370(-)	frameshift		719013	WP_011101131.1	GH25 family lysozyme	95.9	29.8	46.2
MGA_697	LOCUS_06950	sequence1:727838..728617(-)	partial			WP_004114774.1	ABC transporter ATP-binding protein	82.2	56.8	45.5
MGA_709	LOCUS_07070	sequence1:741234..741653(-)	frameshift		741676	WP_002360454.1	sugar ABC transporter permease	99.3	48.1	89.1
MGA_710	LOCUS_07080	sequence1:741671..742111(-)	frameshift		741676	WP_002360454.1	sugar ABC transporter permease	99.3	49.8	67.6
MGA_750	LOCUS_07480	sequence1:783645..786491(-)	partial			WP_003575282.1	translation initiation factor IF-2	69.0	70.1	72.9
MGA_764	LOCUS_07620	sequence1:801160..801444(-)	frameshift		801442	WP_003547839.1	GIY-YIG nuclease family protein	88.3	24.2	51.8
MGA_767	LOCUS_07650	sequence1:803444..804001(-)	frameshift		804045	WP_002288007.1	phosphoribosylamine--glycine ligase	98.4	42.2	45.1
MGA_768	LOCUS_07660	sequence1:804001..804696(-)	frameshift		804045	WP_002369278.1	phosphoribosylamine--glycine ligase	93.5	52.8	53.2
MGA_827	LOCUS_08250	sequence1:858280..859683(-)	partial			WP_013223373.1	carboxylesterase family protein	62.5	61.4	29.2
MGA_836	LOCUS_08340	sequence1:865228..865461(-)	partial			WP_011475814.1	YqgQ family protein	68.8	67.1	67.9
MGA_851	LOCUS_08490	sequence1:879185..880282(-)	partial			WP_003645182.1	HAMP domain-containing histidine kinase	89.3	61.2	52.8
MGA_893	LOCUS_08910	sequence1:918549..919712(-)	partial			WP_000815696.1	DNA repair exonuclease	70.0	67.1	42.6
MGA_903	LOCUS_09010	sequence1:928427..929914(-)	frameshift		929952	WP_011476116.1	cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB	99.8	71.6	51.6
MGA_904	LOCUS_09020	sequence1:929911..930543(-)	frameshift		929952	WP_011476116.1	cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB	81.0	24.6	59.4
MGA_924	LOCUS_09220	sequence1:958128..959438(-)	partial			WP_010990043.1	1,4-beta-N-acetylmuramoylhydrolase	90.8	69.8	37.3
MGA_975	LOCUS_09710	sequence1:1019586..1021451(+)	internal_stop_codon	1021449..1021451(+)		WP_010905759.1	FtsX-like permease family protein	99.4	67.3	37.6
MGA_976	LOCUS_09720	sequence1:1021560..1022303(+)	internal_stop_codon	1021449..1021451(+)		WP_002263841.1	ABC transporter permease	99.6	28.0	43.5
MGA_993	LOCUS_09890	sequence1:1042776..1043027(-)	partial			WP_011024226.1	PspC domain-containing protein	88.0	39.3	42.5
MGA_1012	LOCUS_10080	sequence1:1062660..1063199(-)	partial			WP_011101709.1	competence/damage-inducible protein A	80.4	34.0	51.4
MGA_1021	LOCUS_10170	sequence1:1071723..1072613(-)	partial			WP_003546511.1	AI-2E family transporter	93.2	69.9	47.8
MGA_1030	LOCUS_10260	sequence1:1080306..1081181(-)	partial			WP_011101689.1	competence protein CoiA family protein	59.8	50.4	34.4
MGA_1052	LOCUS_10480	sequence1:1103508..1104074(-)	partial			WP_002295919.1	PepSY domain-containing protein	78.7	68.8	50.0
MGA_1058	LOCUS_10540	sequence1:1110518..1111060(-)	frameshift		1111050	WP_002285971.1	sugar ABC transporter permease	97.8	57.1	75.0
MGA_1059	LOCUS_10550	sequence1:1111033..1111497(-)	frameshift		1111050	WP_003130089.1	sugar ABC transporter permease	82.5	41.0	71.7
MGA_1060	LOCUS_10560	sequence1:1111663..1113438(-)	partial			WP_000515824.1	beta-N-acetylglucosaminidase domain-containing protein	98.3	21.7	43.7
MGA_1087	LOCUS_10830	sequence1:1145847..1146848(-)	partial			WP_003732702.1	peptidoglycan hydrolase Auto	72.1	40.6	47.8
MGA_1094	LOCUS_10900	sequence1:1153192..1153551(+)	partial			WP_003547323.1	amino acid ABC transporter permease	100.0	54.3	73.1
MGA_1124	LOCUS_11200	sequence1:1182052..1182849(+)	partial			WP_011674827.1	hydrolase	31.3	24.6	65.5
MGA_1136	LOCUS_11320	sequence1:1194882..1195388(-)	partial			WP_003644673.1	GGDEF domain-containing protein	81.5	34.6	51.8
MGA_1141	LOCUS_11370	sequence1:1198892..1199512(+)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	61.2
MGA_1142	LOCUS_11380	sequence1:1199536..1199853(+)	partial			WP_003644673.1	GGDEF domain-containing protein	86.7	23.0	52.7
MGA_1194	LOCUS_11900	sequence1:1254086..1255042(-)	partial			WP_011476245.1	YfhO family protein	67.3	23.6	24.2
MGA_1195	LOCUS_11910	sequence1:1255039..1256631(-)	frameshift		1255059	WP_011101404.1	YfhO family protein	96.8	60.0	36.8
MGA_1201	LOCUS_11970	sequence1:1265225..1265815(+)	partial			WP_010774188.1	DUF4950 domain-containing protein	29.6	23.6	57.6
MGA_1207	LOCUS_12030	sequence1:1272021..1272641(-)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	61.2
MGA_1208	LOCUS_12040	sequence1:1272917..1273246(-)	frameshift		1273278	WP_011475482.1	transposase	98.2	59.9	43.9
MGA_1212	LOCUS_12080	sequence1:1275174..1275794(+)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	61.2
MGA_1214	LOCUS_12100	sequence1:1276265..1276969(-)	frameshift,internal_stop_codon	1276303..1276305(-)	1276907,1276324	WP_003643035.1	DUF916 and DUF3324 domain-containing protein	95.3	67.1	33.2
MGA_1224	LOCUS_12200	sequence1:1285758..1288814(+)	partial			WP_011102168.1	cell surface protein	64.4	82.4	25.3
MGA_1230	LOCUS_12260	sequence1:1294005..1294232(+)	partial			WP_011476688.1	IS3 family transposase	86.7	21.8	47.7
MGA_1234	LOCUS_12300	sequence1:1298711..1299331(+)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	61.2
MGA_1256	LOCUS_12520	sequence1:1323557..1324177(+)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	61.2
MGA_1265	LOCUS_12610	sequence1:1331146..1331958(-)	partial			WP_010963940.1	exopolyphosphatase	97.4	53.5	29.6
MGA_1270	LOCUS_12660	sequence1:1335974..1336411(-)	partial			WP_005815091.1	MarR family transcriptional regulator	73.8	70.9	33.6
MGA_1275	LOCUS_12710	sequence1:1342117..1344027(-)	partial			WP_011101976.1	choice-of-anchor A family protein	54.6	41.5	55.0
MGA_1298	LOCUS_12940	sequence1:1364534..1365478(-)	partial			WP_003642889.1	glycoside hydrolase family 1 protein	99.0	64.8	83.3
MGA_1299	LOCUS_12950	sequence1:1365462..1365812(-)	partial			WP_003642889.1	glycoside hydrolase family 1 protein	95.7	23.1	82.9
MGA_1331	LOCUS_13270	sequence1:1399973..1400437(-)	partial			WP_002986120.1	MarR family transcriptional regulator	68.2	70.5	37.1
MGA_1343	LOCUS_13390	sequence1:1412847..1413494(-)	partial			WP_007333288.1	ABC-2 family transporter protein	100.0	67.4	22.6
MGA_1350	LOCUS_13460	sequence1:1419604..1420224(-)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	61.2
MGA_1354	LOCUS_13500	sequence1:1422501..1422986(-)	partial			WP_002304144.1	beta-glucoside-specific PTS transporter subunit IIABC	77.6	20.0	49.2
MGA_1359	LOCUS_13550	sequence1:1427208..1428590(-)	frameshift		1428600	WP_009994286.1	alkaline phosphatase family protein	94.8	67.2	40.0
MGA_1360	LOCUS_13560	sequence1:1428583..1429086(-)	partial			WP_225431655.1	alkaline phosphatase family protein	69.5	17.8	32.8
MGA_1361	LOCUS_13570	sequence1:1429221..1431098(-)	partial			WP_002326842.1	LTA synthase family protein	89.6	62.7	37.6
MGA_1370	LOCUS_13660	sequence1:1440236..1440661(-)	partial			WP_011476061.1	DUF805 domain-containing protein	91.5	36.6	32.8
MGA_1392	LOCUS_13880	sequence1:1463131..1463370(+)	partial			WP_003562902.1	hypothetical protein	69.6	67.5	54.5
MGA_1426	LOCUS_14220	sequence1:1501138..1501797(-)	partial			WP_011254534.1	ABC transporter ATP-binding protein	95.9	39.7	64.6
MGA_1427	LOCUS_14230	sequence1:1502309..1502986(+)	partial			WP_112193161.1	GHKL domain-containing protein	96.4	51.3	38.3
MGA_1430	LOCUS_14260	sequence1:1504966..1505145(-)	partial			WP_011102093.1	bacteriocin immunity protein	98.3	50.0	50.8
MGA_1432	LOCUS_14280	sequence1:1505995..1506945(-)	partial			WP_011100998.1	GHKL domain-containing protein	96.8	67.6	32.7
MGA_1444	LOCUS_14400	sequence1:1517050..1517901(-)	partial			WP_003721549.1	PocR ligand-binding domain-containing protein	35.7	34.4	43.6
MGA_1470	LOCUS_14660	sequence1:1546251..1546475(-)	frameshift		1546259	WP_011262863.1	PRD domain-containing protein	97.3	10.9	42.5
MGA_1510	LOCUS_15060	sequence1:1587226..1587522(-)	frameshift		1587571	WP_003643564.1	MFS transporter	87.8	20.8	76.7
MGA_1511	LOCUS_15070	sequence1:1587464..1588444(-)	frameshift		1587571	WP_003643564.1	MFS transporter	89.6	70.9	78.5
MGA_1526	LOCUS_15220	sequence1:1602244..1603950(+)	partial			WP_125206406.1	hypothetical protein	70.8	65.2	34.4
MGA_1546	LOCUS_15420	sequence1:1623515..1625164(-)	frameshift		1623342,1623526	WP_010706696.1	transcription antiterminator	97.6	83.9	35.5
MGA_1575	LOCUS_15710	sequence1:1655535..1656170(+)	partial			WP_011476275.1	TetR/AcrR family transcriptional regulator	46.4	55.9	35.6
MGA_1577	LOCUS_15730	sequence1:1657290..1657604(+)	frameshift		1657601	WP_000897260.1	lipoate--protein ligase	99.0	30.1	42.7
MGA_1578	LOCUS_15740	sequence1:1657622..1658296(+)	frameshift		1657601	WP_002288102.1	lipoate--protein ligase	99.1	66.5	39.6
MGA_1592	LOCUS_15880	sequence1:1670917..1672161(-)	partial			WP_011254512.1	serine hydrolase	72.9	72.2	40.1
MGA_1612	LOCUS_16080	sequence1:1686898..1687407(+)	partial			WP_003642202.1	EAL domain-containing protein	100.0	73.9	55.0
MGA_1638	LOCUS_16340	sequence1:1717523..1718032(+)	partial			WP_010714167.1	lipoprotein	71.6	69.3	35.8
MGA_1683	LOCUS_16770	sequence1:1777714..1778190(+)	partial			WP_011254564.1	hypothetical protein	80.4	73.4	29.8
MGA_1688	LOCUS_16820	sequence1:1782614..1783234(-)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	61.2
MGA_1695	LOCUS_16890	sequence1:1788887..1789093(-)	partial			WP_003549842.1	DUF2187 family protein	82.4	56.6	50.0
MGA_1697	LOCUS_16910	sequence1:1789949..1790689(+)	partial			WP_002287386.1	NlpC/P60 family protein	45.9	21.4	69.9
MGA_1699	LOCUS_16930	sequence1:1791499..1792536(-)	frameshift		1792619	WP_003640299.1	replication-associated recombination protein A	98.0	75.3	69.2
MGA_1700	LOCUS_16940	sequence1:1792551..1792844(-)	frameshift		1792619	WP_003640299.1	replication-associated recombination protein A	77.3	16.0	69.3
MGA_1718	LOCUS_17120	sequence1:1809965..1810864(+)	partial			WP_003644056.1	helix-turn-helix transcriptional regulator	57.9	62.8	29.3
MGA_1736	LOCUS_17300	sequence1:1828019..1828723(+)	partial			WP_003547406.1	hypothetical protein	23.5	24.3	67.3
MGA_1745	LOCUS_17390	sequence1:1837656..1838099(-)	partial			WP_003562920.1	Asp23/Gls24 family envelope stress response protein	74.8	80.1	41.6
MGA_1765	LOCUS_17590	sequence1:1859203..1859823(-)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	61.2
MGA_1773	LOCUS_17670	sequence1:1866557..1867186(+)	partial			WP_011475904.1	Ltp family lipoprotein	57.4	55.6	58.3
MGA_1786	LOCUS_17800	sequence1:1877641..1878450(-)	partial			WP_003566207.1	hypothetical protein	54.3	50.9	32.0
MGA_1788	LOCUS_17820	sequence1:1878906..1879271(+)	partial			WP_001812710.1	TIGR00341 family protein	98.3	34.3	47.9
MGA_1791	LOCUS_17850	sequence1:1881937..1882137(+)	internal_stop_codon	1882135..1882137(+)		WP_002355209.1	dihydrofolate reductase family protein	100.0	35.6	43.9
MGA_1792	LOCUS_17860	sequence1:1882177..1882476(+)	internal_stop_codon	1882135..1882137(+)		WP_003642108.1	dihydrofolate reductase family protein	98.0	53.6	36.1
MGA_1797	LOCUS_17910	sequence1:1895891..1896337(-)	partial			WP_010905994.1	MerR family transcriptional regulator	72.3	73.6	33.6
MGA_1800	LOCUS_17940	sequence1:1897491..1897949(+)	frameshift		1897913	WP_000859695.1	alpha/beta fold hydrolase	93.4	39.8	49.3
MGA_1801	LOCUS_17950	sequence1:1898044..1898604(+)	frameshift		1897913	WP_000859695.1	alpha/beta fold hydrolase	39.8	20.9	41.3
MGA_1822	LOCUS_18160	sequence1:1917028..1917303(+)	partial			WP_011460091.1	type II toxin-antitoxin system RelE/ParE family toxin	68.1	56.1	43.5
MGA_1831	LOCUS_18250	sequence1:1924598..1925434(+)	partial			WP_003547443.1	hypothetical protein	38.5	58.8	52.7
MGA_1832	LOCUS_18260	sequence1:1925458..1926036(+)	partial			WP_014565877.1	flavodoxin	87.0	43.8	43.5
MGA_1833	LOCUS_18270	sequence1:1926084..1926566(+)	partial			WP_014565877.1	flavodoxin	97.5	41.1	45.9
MGA_1842	LOCUS_18360	sequence1:1931994..1932782(-)	internal_stop_codon	1932945..1932947(-)		WP_011476522.1	amino acid permease	92.4	53.2	72.7
MGA_1843	LOCUS_18370	sequence1:1932945..1933412(-)	internal_stop_codon	1932945..1932947(-)		WP_011101342.1	amino acid permease	98.1	32.6	81.6
MGA_1851	LOCUS_18450	sequence1:1943488..1944186(-)	partial			WP_014537939.1	Bax inhibitor-1/YccA family protein	75.0	67.1	36.0
MGA_1857	LOCUS_18510	sequence1:1949482..1950471(-)	partial			WP_012546680.1	phosphoglycerate dehydrogenase	97.0	60.3	36.3
MGA_1862	LOCUS_18560	sequence1:1955493..1955957(-)	partial			WP_011476598.1	hypothetical protein	71.4	62.6	46.0
MGA_1863	LOCUS_18570	sequence1:1956028..1958208(-)	frameshift		1958216	WP_126795678.1	DEAD/DEAH box helicase	100.0	74.9	41.1
MGA_1864	LOCUS_18580	sequence1:1958175..1958918(-)	frameshift		1958219	WP_126795678.1	DEAD/DEAH box helicase	91.9	24.4	42.6
MGA_1880	LOCUS_18720	sequence1:1982643..1983482(-)	frameshift		1983570	WP_011101341.1	ferrochelatase	98.2	84.9	63.6
MGA_1884	LOCUS_18760	sequence1:1986328..1986783(+)	partial			WP_014565877.1	flavodoxin	91.4	37.1	42.9
MGA_1899	LOCUS_18910	sequence1:2003019..2004506(+)	frameshift		2004446	WP_003648792.1	beta-glucuronidase	98.8	81.8	52.1
MGA_1900	LOCUS_18920	sequence1:2004446..2004817(+)	frameshift		2004446	WP_003648792.1	beta-glucuronidase	99.2	20.4	60.7
MGA_1908	LOCUS_19000	sequence1:2010505..2011011(+)	partial			WP_000577652.1	helix-turn-helix transcriptional regulator	42.9	48.3	55.6
MGA_1912	LOCUS_19040	sequence1:2014484..2015104(-)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	61.2
MGA_1917	LOCUS_19090	sequence1:2018735..2019355(-)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	61.2
MGA_1947	LOCUS_19390	sequence1:2047723..2049408(+)	partial			WP_003549857.1	BspA family leucine-rich repeat surface protein	24.8	11.4	43.7
MGA_1960	LOCUS_19520	sequence1:2059965..2060786(+)	partial			WP_011962427.1	gliding motility-associated ABC transporter ATP-binding subunit GldA	77.7	71.8	28.4
MGA_1963	LOCUS_19550	sequence1:2062160..2063329(+)	partial			WP_011254060.1	metallophosphoesterase	87.4	74.0	39.4
MGA_1995	LOCUS_19870	sequence1:2097805..2098224(-)	partial			WP_005809351.1	MarR family transcriptional regulator	77.0	74.3	30.8
MGA_2022	LOCUS_20140	sequence1:2123916..2125646(+)	partial			WP_003732702.1	peptidoglycan hydrolase Auto	49.0	47.7	40.6
MGA_2025	LOCUS_20170	sequence1:2127336..2128310(+)	partial			WP_003548796.1	SLAP domain-containing protein	49.4	45.3	52.1
MGA_2027	LOCUS_20190	sequence1:2129874..2130674(+)	partial			WP_002382358.1	YdcF family protein	88.7	64.5	32.5
MGA_2046	LOCUS_20380	sequence1:2148004..2148693(-)	partial			WP_003642249.1	matrixin family metalloprotease	75.5	66.2	48.9
MGA_2073	LOCUS_20650	sequence1:2175366..2175986(+)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	60.7
MGA_2096	LOCUS_20880	sequence1:2208555..2209757(-)	partial			WP_011101966.1	CPBP family intramembrane metalloprotease	71.0	70.8	30.7
MGA_2109	LOCUS_21010	sequence1:2215526..2215771(+)	partial			WP_002288670.1	50S ribosomal protein L24	91.4	72.5	63.5
MGA_2132	LOCUS_21240	sequence1:2228822..2230240(-)	partial			WP_003643706.1	PTS glucose transporter subunit IIABC	98.5	70.9	48.0
MGA_2141	LOCUS_21330	sequence1:2237744..2238415(-)	partial			WP_011674780.1	MarR family transcriptional regulator	60.1	71.8	30.5
MGA_2153	LOCUS_21450	sequence1:2248361..2248981(+)	partial			WP_011476688.1	IS3 family transposase	100.0	69.1	61.2
MGA_2237	LOCUS_22290	sequence1:2325733..2327886(+)	frameshift,internal_stop_codon	2327884..2327886(+),2327923..2327925(+),2328028..2328030(+),2328001..2328003(+)	2327901,2328054,2325685	WP_011022345.1	BREX-1 system adenine-specific DNA-methyltransferase PglX	95.4	57.5	37.5
MGA_2238	LOCUS_22300	sequence1:2327996..2329030(+)	frameshift,internal_stop_codon	2327923..2327925(+),2328028..2328030(+),2328001..2328003(+)	2327865,2328057	WP_011459230.1	BREX-1 system adenine-specific DNA-methyltransferase PglX	90.4	29.0	42.9
MGA_2239	LOCUS_22310	sequence1:2329086..2329991(-)	frameshift		2330074	WP_002286587.1	tyrosine-type recombinase/integrase	99.0	82.3	43.8
MGA_2240	LOCUS_22320	sequence1:2330054..2330173(-)	frameshift		2330074	WP_010905337.1	site-specific integrase	82.1	8.5	81.2
MGA_2241	LOCUS_22330	sequence1:2330623..2332101(-)	frameshift		2332154	WP_010939304.1	BREX-1 system adenine-specific DNA-methyltransferase PglX	97.4	39.3	34.3
MGA_2249	LOCUS_22390	sequence2:1158..2372(-)	frameshift		2446	WP_035454417.1	MobQ family relaxase	100.0	58.8	94.3
MGA_2250	LOCUS_22400	sequence2:2429..2737(-)	frameshift		2755,2725,2445	WP_035454417.1	MobQ family relaxase	95.1	14.6	87.0
MGA_2251	LOCUS_22410	sequence2:2744..3217(-)	frameshift		2728,2755	WP_011241757.1	MobQ family relaxase	98.1	22.4	93.5
MGA_2257	LOCUS_22470	sequence2:5399..5785(-)	partial			WP_061777522.1	hypothetical protein	98.4	49.8	88.9
MGA_2258	LOCUS_22480	sequence2:5896..6477(-)	frameshift		6030	WP_011241729.1	replication initiator protein A	77.2	40.9	53.3
MGA_2265	LOCUS_22550	sequence2:13538..15271(-)	partial			WP_011674760.1	HsdR family type I site-specific deoxyribonuclease	99.8	54.1	46.3
MGA_2266	LOCUS_22560	sequence2:15477..15785(+)	frameshift		15746	WP_103152732.1	IS5 family transposase	87.3	34.0	64.0
MGA_2267	LOCUS_22570	sequence2:15968..16264(+)	frameshift		15746	WP_156656235.1	IS5 family transposase	100.0	38.1	63.3
MGA_2269	LOCUS_22590	sequence2:17377..18039(+)	partial			WP_011674120.1	ISL3 family transposase	97.3	51.4	42.3
MGA_2278	LOCUS_22680	sequence2:21559..21738(-)	frameshift		21706	WP_003561810.1	IS30-like element ISLpl1 family transposase	83.1	15.9	98.0
MGA_2279	LOCUS_22690	sequence2:21698..22051(-)	frameshift		21706	WP_003561810.1	IS30-like element ISLpl1 family transposase	98.3	37.2	93.0
MGA_2319	LOCUS_23090	sequence2:62738..63166(-)	frameshift		63136,62760,63403	WP_010922655.1	type I restriction endonuclease subunit R	96.5	13.8	40.1
MGA_2320	LOCUS_23100	sequence2:63123..63401(-)	frameshift		63136,63664,63400,63624,63470	WP_011674760.1	HsdR family type I site-specific deoxyribonuclease	95.7	8.7	63.6
MGA_2321	LOCUS_23110	sequence2:63638..63814(-)	frameshift		63472,63399,63623,63819,63663	WP_011674760.1	HsdR family type I site-specific deoxyribonuclease	87.9	4.7	56.9
MGA_2322	LOCUS_23120	sequence2:63745..64131(-)	frameshift		63623,63819,63663	WP_010922655.1	type I restriction endonuclease subunit R	80.5	10.2	50.5
MGA_2323	LOCUS_23130	sequence2:64337..64645(+)	frameshift		64606	WP_103152732.1	IS5 family transposase	87.3	34.0	64.0
MGA_2324	LOCUS_23140	sequence2:64828..65124(+)	frameshift		64606	WP_156656235.1	IS5 family transposase	100.0	38.1	63.3
MGA_2326	LOCUS_23160	sequence2:66237..66899(+)	partial			WP_011674120.1	ISL3 family transposase	97.3	51.4	42.3
MGA_2327	LOCUS_23170	sequence2:67363..67743(-)	frameshift		67452	WP_002365588.1	hypothetical protein	69.8	25.2	43.6