{ "type": "genome", "identifier": "GCF_002850745.1", "organism": "Nonomuraea indica", "title": "Nonomuraea indica", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Sun Yat-Sen University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002850745.1", "bioproject": "PRJNA224116", "biosample": "SAMN08159213", "wgs_master": "PJOK00000000.1", "refseq_category": "reference genome", "taxid": "1581193", "species_taxid": "1581193", "organism_name": "Nonomuraea indica", "infraspecific_name": "strain=DRQ-2", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/01/02", "asm_name": "ASM285074v1", "asm_submitter": "Sun Yat-Sen University", "gbrs_paired_asm": "GCA_002850745.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/850/745/GCF_002850745.1_ASM285074v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "8289263", "genome_size_ungapped": "8288417", "gc_percent": "72.500000", "replicon_count": "0", "scaffold_count": "59", "contig_count": "126", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002850745.1-RS_2024_05_03", "annotation_date": "2024-05-03", "total_gene_count": "7787", "protein_coding_gene_count": "7628", "non_coding_gene_count": "68", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-01-02", "dateModified": "2018-01-02", "datePublished": "2018-01-02", "_annotation": { "sample_count": 1, "sample_organism": [ "Nonomuraea indica" ], "sample_taxid": [ "1581193" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "India" ], 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"strain": "strain=CGMCC 4.7431", "accession": "GCA_019396405.1", "taxid": 2665663, "species_taxid": 2665663, "relation_to_type": "type", "validated": true, "ani": 83.9727, "matched_fragments": 1164, "total_fragments": 2736, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea ceibae", "strain": "strain=KCTC 39826", "accession": "GCA_019396325.1", "taxid": 1935170, "species_taxid": 1935170, "relation_to_type": "type", "validated": true, "ani": 83.6206, "matched_fragments": 1744, "total_fragments": 2736, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea aurantiaca", "strain": "strain=NEAU-L178", "accession": "GCA_020215705.1", "taxid": 2878562, "species_taxid": 2878562, "relation_to_type": "type", "validated": true, "ani": 83.388, "matched_fragments": 1830, "total_fragments": 2736, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nonomuraea glycinis", "strain": "strain=CGMCC 4.7430", "accession": 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