{
    "type": "genome",
    "identifier": "GCF_002879535.1",
    "organism": "Mesorhizobium intechi",
    "title": "Mesorhizobium intechi",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Instituto de Biotecnologia y Biologia Molecular",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_002879535.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN08321006",
        "wgs_master": "PNOT00000000.2",
        "refseq_category": "reference genome",
        "taxid": "537601",
        "species_taxid": "537601",
        "organism_name": "Mesorhizobium intechi",
        "infraspecific_name": "strain=BD68",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2019/07/25",
        "asm_name": "ASM287953v2",
        "asm_submitter": "Instituto de Biotecnologia y Biologia Molecular",
        "gbrs_paired_asm": "GCA_002879535.2",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/879/535/GCF_002879535.1_ASM287953v2",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "6581278",
        "genome_size_ungapped": "6581278",
        "gc_percent": "63.000000",
        "replicon_count": "0",
        "scaffold_count": "393",
        "contig_count": "393",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_002879535.1-RS_2024_05_04",
        "annotation_date": "2024-05-04",
        "total_gene_count": "6569",
        "protein_coding_gene_count": "6270",
        "non_coding_gene_count": "56",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2019-07-25",
    "dateModified": "2019-07-25",
    "datePublished": "2019-07-25",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Mesorhizobium intechi"
        ],
        "sample_taxid": [
            "537601"
        ],
        "sample_host_organism": [
            "Lotus tenuis"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Argentina"
        ],
        "sample_host_location_id": [],
        "data_size": "1.841 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
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    "data_type": "G",
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    "_dfast": {
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        "Number of Sequences": "393",
        "Longest Sequences (bp)": "143770",
        "N50 (bp)": "28806",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "63.1",
        "Number of CDSs": "6082",
        "Average Protein Length": "296.0",
        "Coding Ratio (%)": "82.1",
        "Number of rRNAs": "3",
        "Number of tRNAs": "51",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Mesorhizobium intechi",
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            {
                "organism_name": "Mesorhizobium jarvisii",
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                "species_taxid": 1777867,
                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Mesorhizobium jarvisii",
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                "status": "below_threshold"
            },
            {
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                "taxid": 2066070,
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                "matched_fragments": 1658,
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Mesorhizobium carmichaelinearum",
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                "ani": 90.5808,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Mesorhizobium comanense",
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                "accession": "GCA_005503535.1",
                "taxid": 2502215,
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                "relation_to_type": "type",
                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Mesorhizobium onobrychidis",
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                "accession": "GCA_024707545.1",
                "taxid": 2775404,
                "species_taxid": 2775404,
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                "validated": true,
                "ani": 84.3989,
                "matched_fragments": 1250,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nitratireductor alexandrii",
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                "species_taxid": 2448161,
                "relation_to_type": "type",
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                "ani": 78.9904,
                "matched_fragments": 588,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nitratireductor arenosus",
                "strain": "strain=CAU 1489",
                "accession": "GCA_009742725.1",
                "taxid": 2682096,
                "species_taxid": 2682096,
                "relation_to_type": "type",
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                "ani": 78.8784,
                "matched_fragments": 573,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chelativorans intermedius",
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                "accession": "GCA_025398255.1",
                "taxid": 515947,
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                "relation_to_type": "type",
                "validated": true,
                "ani": 78.1297,
                "matched_fragments": 480,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
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                "accession": "GCF_002879535.1",
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                "matched_fragments": 1972,
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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                "accession": "GCF_002295115.1",
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            {
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            {
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}