{ "type": "genome", "identifier": "GCF_002900975.1", "organism": "Tabrizicola aquatica", "title": "Tabrizicola aquatica", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Shandong University,Weihai", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002900975.1", "bioproject": "PRJNA224116", "biosample": "SAMN08162799", "wgs_master": "PJON00000000.1", "refseq_category": "reference genome", "taxid": "909926", "species_taxid": "909926", "organism_name": "Tabrizicola aquatica", "infraspecific_name": "strain=RCRI19", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/01/26", "asm_name": "ASM290097v1", "asm_submitter": "Shandong University,Weihai", "gbrs_paired_asm": "GCA_002900975.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/900/975/GCF_002900975.1_ASM290097v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3870427", "genome_size_ungapped": "3870427", "gc_percent": "66.500000", "replicon_count": "0", "scaffold_count": "12", "contig_count": "12", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002900975.1-RS_2024_05_03", "annotation_date": "2024-05-03", "total_gene_count": "3882", "protein_coding_gene_count": "3812", "non_coding_gene_count": "52", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-01-26", "dateModified": "2018-01-26", "datePublished": "2018-01-26", "_annotation": { "sample_count": 1, "sample_organism": [ "Tabrizicola aquatica" ], "sample_taxid": [ "909926" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Iran: Tabriz city, 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobacter thermarum", "strain": "strain=YIM 73036", "accession": "GCA_003574395.1", "taxid": 2670345, "species_taxid": 2670345, "relation_to_type": "type", "validated": true, "ani": 83.6981, "matched_fragments": 860, "total_fragments": 1283, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobacter flagellatus", "strain": "strain=SYSU G03088", "accession": "GCA_008271465.1", "taxid": 2593021, "species_taxid": 2593021, "relation_to_type": "type", "validated": true, "ani": 83.5637, "matched_fragments": 871, "total_fragments": 1283, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhodobacter ruber", "strain": "strain=CCP-1", "accession": "GCA_009908315.1", "taxid": 1985673, "species_taxid": 1985673, "relation_to_type": "type", "validated": true, "ani": 79.7949, "matched_fragments": 663, "total_fragments": 1283, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cereibacter changlensis", "strain": "strain=DSM 18774", "accession": "GCA_003254335.1", "taxid": 402884, "species_taxid": 402884, "relation_to_type": "type", "validated": true, "ani": 79.6251, "matched_fragments": 637, "total_fragments": 1283, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmobacter straminiformis", "strain": "strain=CAM-8", "accession": "GCA_014243445.1", "taxid": 2045119, "species_taxid": 2045119, "relation_to_type": "type", "validated": true, "ani": 79.5841, "matched_fragments": 637, "total_fragments": 1283, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tabrizicola algicola", "strain": "strain=ETT8", "accession": "GCA_010915705.1", "taxid": 2709381, "species_taxid": 2709381, "relation_to_type": "type", "validated": true, "ani": 79.4107, "matched_fragments": 576, "total_fragments": 1283, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmobacter aquatilis", "strain": 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