{
    "type": "genome",
    "identifier": "GCF_002901995.1",
    "organism": "Staphylococcus coagulans",
    "title": "Staphylococcus coagulans",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Modernising Medical Microbiology",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_002901995.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN05978020",
        "wgs_master": "PPQN00000000.1",
        "refseq_category": "na",
        "taxid": "74706",
        "species_taxid": "74706",
        "organism_name": "Staphylococcus coagulans",
        "infraspecific_name": "strain=DSM 6628",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2018/01/27",
        "asm_name": "ASM290199v1",
        "asm_submitter": "Modernising Medical Microbiology",
        "gbrs_paired_asm": "GCA_002901995.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/901/995/GCF_002901995.1_ASM290199v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2443567",
        "genome_size_ungapped": "2443317",
        "gc_percent": "36.000000",
        "replicon_count": "0",
        "scaffold_count": "155",
        "contig_count": "155",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_002901995.1-RS_2024_04_30",
        "annotation_date": "2024-04-30",
        "total_gene_count": "2384",
        "protein_coding_gene_count": "2254",
        "non_coding_gene_count": "69",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2018-01-27",
    "dateModified": "2018-01-27",
    "datePublished": "2018-01-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Staphylococcus coagulans"
        ],
        "sample_taxid": [
            "74706"
        ],
        "sample_host_organism": [
            "Canine"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Germany: Braunschweig"
        ],
        "sample_host_location_id": [],
        "data_size": "0.695 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2443567",
        "Number of Sequences": "155",
        "Longest Sequences (bp)": "206429",
        "N50 (bp)": "54763",
        "Gap Ratio (%)": "0.010231",
        "GCcontent (%)": "35.8",
        "Number of CDSs": "2261",
        "Average Protein Length": "299.3",
        "Coding Ratio (%)": "83.1",
        "Number of rRNAs": "1",
        "Number of tRNAs": "53",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
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                "organism_name": "Staphylococcus coagulans",
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 756,
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                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
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                "accession": "GCA_011137195.1",
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                "species_taxid": 1295,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 686,
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                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Staphylococcus schleiferi subsp. schleiferi",
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                "status": "inconclusive"
            },
            {
                "organism_name": "Staphylococcus schleiferi",
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                "relation_to_type": "type",
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                "ani": 95.0878,
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                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Staphylococcus intermedius",
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                "ani": 80.1873,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Staphylococcus delphini",
                "strain": "strain=NCTC 12225",
                "accession": "GCA_002902785.1",
                "taxid": 53344,
                "species_taxid": 53344,
                "relation_to_type": "type",
                "validated": true,
                "ani": 80.041,
                "matched_fragments": 409,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Staphylococcus lutrae",
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                "accession": "GCA_002902165.1",
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                "species_taxid": 155085,
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                "ani": 79.4762,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Staphylococcus capitis subsp. capitis",
                "strain": "strain=DSM 20326",
                "accession": "GCA_025272975.1",
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                "relation_to_type": "type",
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                "ani": 77.8739,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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                "accession": "GCF_002901995.1",
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                "mean_intra_species_ani": "N/A",
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            },
            {
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}