# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_121	LOCUS_01200	sequence002:52818..53411(+)	partial			WP_156276331.1	thiamine phosphate synthase	64.5	66.2	31.0
MGA_208	LOCUS_02040	sequence005:7163..7903(+)	frameshift		7831	WP_011475518.1	type II CRISPR RNA-guided endonuclease Cas9	86.2	19.0	34.2
MGA_217	LOCUS_02110	sequence007:8631..>9296(-)	partial			WP_002485186.1	peptidylprolyl isomerase	99.1	67.7	63.6
MGA_221	LOCUS_02140	sequence009:1497..2000(-)	partial			WP_015444602.1	trifunctional transcriptional activator/DNA repair protein Ada/methylated-DNA--[protein]-cysteine S-methyltransferase	86.2	40.7	40.7
MGA_270	LOCUS_02630	sequence009:53511..54968(+)	partial			WP_001042137.1	neuraminidase NanB	98.6	69.0	55.9
MGA_273	LOCUS_02660	sequence009:57103..57492(+)	partial			WP_002489903.1	hypothetical protein	72.9	73.4	40.4
MGA_319	LOCUS_03020	sequence021:9642..10241(+)	partial			WP_001829387.1	hypothetical protein	89.9	62.0	62.9
MGA_333	LOCUS_03130	sequence025:1222..1518(-)	partial			WP_000777474.1	IS21 family transposase	90.8	53.6	51.7
MGA_334	LOCUS_03140	sequence025:1640..1879(-)	partial			WP_001059647.1	ISL3 family transposase	93.7	16.9	54.1
MGA_421	LOCUS_03950	sequence034:76..789(+)	partial			WP_004080933.1	ABC transporter ATP-binding protein	79.7	67.5	31.2
MGA_422	LOCUS_03960	sequence034:1034..1342(+)	internal_stop_codon	968..970(+),950..952(+),1340..1342(+)		WP_011082549.1	IS1182-like element ISSep1 family transposase	95.1	17.5	57.7
MGA_426	LOCUS_03980	sequence036:399..1205(+)	frameshift		354	WP_086956687.1	IS3 family transposase	97.8	66.4	52.7
MGA_427	LOCUS_03990	sequence037:152..3616(+)	partial			WP_041814900.1	Rib/alpha-like domain-containing protein	34.1	24.3	30.6
MGA_441	LOCUS_04130	sequence037:18214..19200(+)	partial			WP_003247155.1	plipastatin non-ribosomal peptide synthetase PpsB	97.6	12.7	25.5
MGA_442	LOCUS_04140	sequence037:19188..20330(+)	partial			WP_015444960.1	ATP-grasp domain-containing protein	48.7	45.6	28.8
MGA_455	LOCUS_04270	sequence037:36977..39496(+)	partial			WP_010905630.1	CDP-glycerol glycerophosphotransferase family protein	68.4	71.1	41.8
MGA_465	LOCUS_04320	sequence042:2419..3711(+)	partial			WP_000120296.1	SdrH family protein	66.0	76.1	31.4
MGA_469	LOCUS_04360	sequence042:7175..7414(-)	frameshift		7440,7176	WP_000179343.1	tyrosine-type recombinase/integrase	100.0	22.6	67.0
MGA_470	LOCUS_04370	sequence042:7384..7770(-)	frameshift		7440,7176	WP_000179343.1	tyrosine-type recombinase/integrase	84.4	27.7	66.7
MGA_473	LOCUS_04400	sequence042:9083..9772(-)	partial			WP_003243950.1	minor protease Epr	67.2	25.6	30.5
MGA_547	LOCUS_05100	sequence047:3868..4230(+)	partial			WP_002503031.1	helix-turn-helix domain-containing protein	69.2	40.9	67.5
MGA_574	LOCUS_05340	sequence052:13207..16377(+)	partial			WP_000118314.1	DNA translocase FtsK	84.1	71.9	51.3
MGA_586	LOCUS_05450	sequence053:3634..5730(-)	frameshift		5866	WP_000033406.1	type III restriction-modification system endonuclease	97.1	69.0	33.4
MGA_587	LOCUS_05460	sequence053:5831..6610(-)	frameshift		5866	WP_000033406.1	type III restriction-modification system endonuclease	93.1	22.9	35.0
MGA_596	LOCUS_05510	sequence058:136..606(+)	partial			WP_002485386.1	energy-coupling factor transporter ATPase	67.3	34.6	39.0
MGA_704	LOCUS_06570	sequence062:8881..9510(+)	frameshift		8881	WP_000592610.1	imidazole glycerol phosphate synthase subunit HisF	98.6	44.6	63.6
MGA_730	LOCUS_06830	sequence062:45681..48428(-)	partial			WP_011100946.1	glycosyltransferase	63.5	63.8	26.1
MGA_749	LOCUS_07020	sequence062:69179..70183(-)	partial			WP_000727772.1	zinc ABC transporter substrate-binding lipoprotein AdcA	98.8	62.1	57.4
MGA_768	LOCUS_07180	sequence065:363..701(+)	partial			WP_096810449.1	site-specific integrase	91.1	28.0	52.9
MGA_769	LOCUS_07190	sequence065:1599..2030(+)	partial			WP_126796224.1	recombinase family protein	91.6	65.6	51.1
MGA_775	LOCUS_07240	sequence066:8682..9239(+)	partial			WP_000166920.1	M23 family metallopeptidase	74.1	69.8	63.5
MGA_780	LOCUS_07290	sequence066:13160..14059(-)	partial			WP_011403679.1	NAD(P)H-binding protein	48.8	29.9	32.4
MGA_860	LOCUS_08010	sequence073:36196..38070(+)	partial			WP_012775697.1	DUF6359 domain-containing protein	92.3	54.2	44.2
MGA_889	LOCUS_08290	sequence074:3033..4058(-)	frameshift		4084	WP_000524006.1	glucosaminidase domain-containing protein	99.4	54.0	48.2
MGA_890	LOCUS_08300	sequence074:4055..4486(-)	frameshift		4084	WP_000524006.1	glucosaminidase domain-containing protein	78.3	18.2	34.7
MGA_918	LOCUS_08560	sequence075:629..1009(+)	partial			WP_011023283.1	IS21-like element ISMac9 family helper ATPase IstB	83.3	40.9	39.0
MGA_919	LOCUS_08570	sequence075:1054..1257(+)	partial			WP_011021079.1	IS21-like element ISMac3 family helper ATPase IstB	83.6	21.8	57.1
MGA_920	LOCUS_08580	sequence075:1311..1892(+)	partial			WP_011021079.1	IS21-like element ISMac3 family helper ATPase IstB	70.5	52.9	58.1
MGA_923	LOCUS_08590	sequence076:178..813(-)	partial			WP_000013859.1	Crp/Fnr family transcriptional regulator	48.3	44.3	37.3
MGA_931	LOCUS_08610	sequence080:379..1188(+)	partial			WP_010868022.1	SagB/ThcOx family dehydrogenase	56.1	76.5	31.1
MGA_942	LOCUS_08690	sequence083:4692..4847(+)	frameshift,internal_stop_codon	4846..4848(+)	4692	WP_011082644.1	GNAT family N-acetyltransferase	100.0	27.0	52.9
MGA_962	LOCUS_08890	sequence083:28670..29863(+)	partial			WP_012257995.1	glycosyltransferase family 4 protein	72.3	72.5	22.3
MGA_964	LOCUS_08910	sequence083:30433..33012(+)	partial			WP_002370472.1	glycosyltransferase family A protein	24.1	41.2	25.9
MGA_965	LOCUS_08920	sequence083:33009..34157(+)	partial			WP_004081188.1	glycosyltransferase	47.6	46.6	27.0
MGA_969	LOCUS_08960	sequence083:37245..38156(+)	partial			WP_003227930.1	teichoic acids export ABC transporter ATP-binding subunit TagH	88.1	49.9	49.4
MGA_970	LOCUS_08970	sequence083:38209..39540(+)	partial			WP_003115615.1	glycosyltransferase family 4 protein	66.1	78.3	22.5
MGA_983	LOCUS_09070	sequence087:1217..1468(+)	partial			WP_143015502.1	IS3 family transposase	77.1	20.6	45.3
MGA_986	LOCUS_09080	sequence088:726..1598(+)	partial			WP_000061775.1	Lsa family ABC-F type ribosomal protection protein	99.7	61.2	44.7
MGA_987	LOCUS_09090	sequence089:93..578(-)	partial			WP_011391832.1	IS21-like element helper ATPase IstB	91.9	58.7	49.3
MGA_988	LOCUS_09100	sequence089:625..1431(-)	frameshift		1475	WP_157061663.1	IS3 family transposase	97.8	66.4	53.4
MGA_996	LOCUS_09140	sequence091:1368..1907(+)	partial			WP_002387187.1	ABC-F type ribosomal protection protein Lsa(A)	96.1	34.3	33.7
MGA_1002	LOCUS_09190	sequence092:423..1004(+)	frameshift		974	WP_154224912.1	IS110 family transposase	96.4	45.9	56.5
MGA_1003	LOCUS_09200	sequence092:1127..1423(+)	frameshift		986	WP_104832469.1	IS110 family transposase	100.0	25.0	68.4
MGA_1066	LOCUS_09750	sequence102:350..2392(-)	partial			WP_001208917.1	FKLRK protein	67.5	84.4	35.6
MGA_1070	LOCUS_09790	sequence102:6572..8062(-)	partial			WP_000943819.1	YSIRK domain-containing triacylglycerol lipase Lip2/Geh	96.8	67.3	61.7
MGA_1072	LOCUS_09810	sequence102:8968..9927(+)	partial			WP_004399048.1	endonuclease YokF	69.6	83.1	42.5
MGA_1079	LOCUS_09870	sequence103:3828..4163(-)	frameshift		4210	WP_012028003.1	arginine--tRNA ligase	93.7	18.9	33.0
MGA_1080	LOCUS_09880	sequence103:4163..5344(-)	frameshift		4209,5391	WP_002288432.1	arginine--tRNA ligase	96.2	68.2	49.0
MGA_1083	LOCUS_09900	sequence103:6000..6527(-)	frameshift		6495	WP_126796224.1	recombinase family protein	94.3	83.1	45.5
MGA_1119	LOCUS_10230	sequence107:33633..34322(-)	partial			WP_000162810.1	DsbA family protein	73.4	81.9	35.5
MGA_1122	LOCUS_10260	sequence107:37665..37802(+)	partial			WP_000240855.1	50S ribosomal protein L34	60.0	60.0	100.0
MGA_1148	LOCUS_10520	sequence107:63792..64352(+)	frameshift		63718	WP_003570336.1	tyrosine recombinase XerC	84.9	55.0	30.3
MGA_1191	LOCUS_10950	sequence107:109414..110169(+)	partial			WP_000905888.1	LD-carboxypeptidase	97.2	71.4	45.7
MGA_1192	LOCUS_10960	sequence107:110174..110560(+)	partial			WP_011962511.1	LD-carboxypeptidase	96.1	35.7	36.3
MGA_1196	LOCUS_11000	sequence107:115379..115549(+)	internal_stop_codon	115547..115549(+)		WP_001832556.1	alpha/beta hydrolase	87.5	15.9	65.3
MGA_1197	LOCUS_11010	sequence107:115589..116308(+)	internal_stop_codon	115547..115549(+)		WP_001832556.1	alpha/beta hydrolase	98.3	76.0	53.2
MGA_1258	LOCUS_11550	sequence115:1..547(+)	partial			WP_001104062.1	MFS transporter	93.9	40.8	27.6
MGA_1262	LOCUS_11590	sequence116:2407..2802(+)	frameshift		2784	WP_001831307.1	pyrroline-5-carboxylate reductase	90.1	43.5	68.6
MGA_1263	LOCUS_11600	sequence116:2799..3227(+)	frameshift		2784	WP_001831307.1	pyrroline-5-carboxylate reductase	97.9	51.3	77.0
MGA_1269	LOCUS_11660	sequence117:255..647(-)	frameshift,internal_stop_codon	86..88(-),254..256(-)	338,275,109,79	WP_088197863.1	IS3-like element ISSag2 family transposase	73.1	26.9	52.5
MGA_1270	LOCUS_11670	sequence117:880..1239(-)	frameshift		912	WP_155767756.1	IS3 family transposase	91.6	28.1	48.6
MGA_1271	LOCUS_11680	sequence117:1389..1574(+)	partial			WP_000777474.1	IS21 family transposase	96.7	35.5	50.8
MGA_1273	LOCUS_11690	sequence118:418..>997(-)	partial			WP_011921665.1	ABC transporter ATP-binding protein	44.3	29.7	53.5
MGA_1274	LOCUS_11700	sequence119:318..1010(+)	partial			WP_000255944.1	IS21-like element IS100 family transposase	85.7	56.5	33.2
MGA_1275	LOCUS_11710	sequence119:910..1464(+)	partial			WP_070049611.1	IS21 family transposase	72.8	41.3	33.1
MGA_1301	LOCUS_11940	sequence122:4658..5521(+)	internal_stop_codon	4655..4657(+)		WP_002292381.1	L-ribulose-5-phosphate 3-epimerase	98.3	56.3	55.0
MGA_1303	LOCUS_11960	sequence122:6271..7902(+)	partial			WP_001012737.1	BglG family transcription antiterminator	64.3	48.9	21.1
MGA_1370	LOCUS_12570	sequence130:37194..37724(-)	partial			WP_002469112.1	UvrB/UvrC motif-containing protein	76.7	72.2	60.0
MGA_1382	LOCUS_12680	sequence132:6..257(-)	partial			WP_095092556.1	IS1182 family transposase	67.5	10.0	50.0
MGA_1390	LOCUS_12760	sequence132:6159..6734(-)	frameshift		6912	WP_002287458.1	ABC-F type ribosomal protection protein Msr(C)	92.1	35.8	45.5
MGA_1391	LOCUS_12770	sequence132:6883..7269(-)	frameshift		6912,7327	WP_002287458.1	ABC-F type ribosomal protection protein Msr(C)	88.3	23.0	35.4
MGA_1392	LOCUS_12780	sequence132:7325..7606(-)	frameshift,internal_stop_codon	7354..7356(-),7378..7380(-)	7390	WP_010966289.1	ABC-F family ATP-binding cassette domain-containing protein	66.7	11.7	40.3
MGA_1393	LOCUS_12790	sequence132:7625..8425(-)	partial			WP_004192331.1	ABC transporter permease	70.3	74.0	23.4
MGA_1422	LOCUS_13080	sequence132:37767..38714(-)	partial			WP_001831571.1	CPBP family intramembrane metalloprotease	84.1	70.2	60.1
MGA_1465	LOCUS_13500	sequence134:10141..10527(-)	partial			WP_002263700.1	DUF3021 domain-containing protein	74.2	72.0	36.8
MGA_1485	LOCUS_13700	sequence134:33190..>33708(-)	partial			WP_000934467.1	MSCRAMM family adhesin SdrD	31.4	4.0	54.5
MGA_1531	LOCUS_14130	sequence138:1009..2877(+)	partial			WP_000044547.1	serine-rich repeat glycoprotein adhesin SasA	100.0	27.3	24.8
MGA_1532	LOCUS_14140	sequence138:3332..4186(+)	partial			WP_001831846.1	accessory Sec system protein translocase subunit SecY2	100.0	71.2	48.6
MGA_1560	LOCUS_14420	sequence139:114..290(+)	partial			WP_000048060.1	30S ribosomal protein S21	74.1	74.1	100.0
MGA_1630	LOCUS_15110	sequence141:670..1200(-)	partial			WP_005115372.1	alpha/beta hydrolase	89.2	67.9	33.3
MGA_1685	LOCUS_15660	sequence144:251..1429(+)	frameshift		973,1054	WP_010966780.1	group II intron reverse transcriptase/maturase	96.2	80.0	44.6
MGA_1723	LOCUS_16040	sequence145:38268..39095(+)	partial			WP_001549718.1	YdcF family protein	75.6	64.6	46.2
MGA_1736	LOCUS_16170	sequence145:54594..55232(-)	partial			WP_003974977.1	YcnI family protein	76.9	74.7	34.9
MGA_1741	LOCUS_16220	sequence145:60822..62933(+)	partial			WP_010965896.1	AraC family transcriptional regulator	18.3	43.3	31.0
MGA_1801	LOCUS_16810	sequence147:19703..20323(+)	partial			WP_000070831.1	DUF4887 domain-containing protein	33.0	32.5	41.2
MGA_1822	LOCUS_17020	sequence147:36763..39135(+)	partial			WP_010714140.1	DNA primase family protein	61.8	61.1	51.1
MGA_1868	LOCUS_17480	sequence148:45211..45726(+)	partial			WP_001044560.1	immunodominant staphylococcal antigen IsaB	51.5	49.7	36.0
MGA_1920	LOCUS_17960	sequence156:1..786(+)	partial			WP_011837563.1	Cna B-type domain-containing protein	69.0	11.1	43.3
MGA_1934	LOCUS_18100	sequence156:16355..17173(+)	partial			WP_010990014.1	autolysin Ami	69.5	20.6	41.9
MGA_1937	LOCUS_18130	sequence156:19148..19681(-)	partial			WP_000475325.1	staphylococcal enterotoxin-like toxin X	72.9	63.5	38.0
MGA_1938	LOCUS_18140	sequence156:19868..20401(-)	partial			WP_000475325.1	staphylococcal enterotoxin-like toxin X	78.0	68.0	44.9
MGA_1943	LOCUS_18190	sequence157:2234..2758(-)	partial			WP_003131606.1	TDT family transporter	92.5	49.4	43.5
MGA_1960	LOCUS_18360	sequence157:17851..22254(+)	partial			WP_001032521.1	SpGH101 family endo-alpha-N-acetylgalactosaminidase	73.1	46.8	51.4
MGA_1964	LOCUS_18400	sequence157:26791..27234(-)	partial			WP_048126054.1	CDGSH iron-sulfur domain-containing protein	98.0	64.2	32.2
MGA_1986	LOCUS_18620	sequence158:18832..20211(-)	partial			WP_001557458.1	extracellular adherence protein Eap/Map	66.9	65.5	35.8
MGA_2016	LOCUS_18920	sequence159:31216..32100(-)	partial			WP_002470268.1	FtsQ-type POTRA domain-containing protein	93.2	58.7	41.6
MGA_2083	LOCUS_19520	sequence167:4860..5450(-)	partial			WP_000916728.1	accessory Sec system protein Asp3	78.1	47.0	44.4
MGA_2091	LOCUS_19600	sequence168:1..1075(+)	partial			WP_194313290.1	IS1182 family transposase	99.4	65.7	56.6
MGA_2119	LOCUS_19880	sequence171:76..327(-)	partial			WP_001832504.1	transposase	83.1	73.4	52.2
MGA_2140	LOCUS_20030	sequence178:5034..7541(-)	partial			WP_000934467.1	MSCRAMM family adhesin SdrD	72.2	43.0	34.1
MGA_2156	LOCUS_20190	sequence178:23317..24627(+)	partial			WP_011986202.1	radical SAM/SPASM domain-containing protein	38.3	50.8	28.6
MGA_2180	LOCUS_20420	sequence179:31501..31821(-)	partial			WP_000171798.1	hypothetical protein	80.2	74.6	63.5
MGA_2182	LOCUS_20440	sequence179:33824..36586(-)	partial			WP_000841404.1	fibronectin-binding protein FnbB	73.2	76.4	36.7
MGA_2219	LOCUS_20810	sequence179:72114..72299(-)	partial			WP_001838183.1	zinc-finger domain-containing protein	85.2	71.2	65.4
MGA_2258	LOCUS_21200	sequence180:33463..34314(-)	frameshift		34313	WP_000071459.1	ryptide export MFS transporter	97.5	70.4	39.9
MGA_2286	LOCUS_21480	sequence181:10428..10727(+)	frameshift		10369	WP_000589549.1	arsenate reductase family protein	100.0	83.9	70.7
MGA_2289	LOCUS_21510	sequence181:11735..11935(+)	partial			WP_001831936.1	thioredoxin family protein	93.9	63.3	61.3
MGA_2303	LOCUS_21640	sequence182:1..2117(+)	partial			WP_002263549.1	type II CRISPR RNA-guided endonuclease Cas9	98.0	52.9	28.2
MGA_2307	LOCUS_21670	sequence183:197..559(+)	partial			WP_000876756.1	HTH-type transcriptional regulator SarS	76.7	36.8	33.7
MGA_2330	LOCUS_21880	sequence188:34..492(+)	partial			WP_003270539.1	GNAT family N-acetyltransferase	97.4	49.4	26.4
MGA_2350	LOCUS_22050	sequence193:384..>1169(-)	partial			WP_041814900.1	Rib/alpha-like domain-containing protein	73.2	11.4	35.8
MGA_2370	LOCUS_22250	sequence195:15641..15868(+)	partial			WP_001548645.1	YneF family protein	76.0	60.0	66.7