{ "type": "genome", "identifier": "GCF_002902945.1", "organism": "Paraburkholderia caribensis", "title": "Paraburkholderia caribensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of Groningen", "publication": [ {} ], "properties": { "assembly_accession": "GCF_002902945.1", "bioproject": "PRJNA224116", "biosample": "SAMN07573573", "wgs_master": "na", "refseq_category": "na", "taxid": "75105", "species_taxid": "75105", "organism_name": "Paraburkholderia caribensis", "infraspecific_name": "strain=DSM 13236", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/01/29", "asm_name": "ASM290294v1", "asm_submitter": "University of Groningen", "gbrs_paired_asm": "GCA_002902945.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/902/945/GCF_002902945.1_ASM290294v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "9032490", "genome_size_ungapped": "9032490", "gc_percent": "62.500000", "replicon_count": "4", "scaffold_count": "4", "contig_count": "4", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_002902945.1-RS_2024_12_23", "annotation_date": "2024-12-23", "total_gene_count": "8085", "protein_coding_gene_count": "7845", "non_coding_gene_count": "87", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-01-29", "dateModified": "2018-01-29", "datePublished": "2018-01-29", "_annotation": { "sample_count": 1, "sample_organism": [ "Paraburkholderia caribensis" ], "sample_taxid": [ "75105" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Martinique" ], 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95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017104715.1", "gtdb_species": "s__Paraburkholderia sp017104715", "ani": 88.5471, "matched_fragments": 2207, "total_fragments": 3009, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__Paraburkholderia", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.302, "cell_length": 0.0, "doubling_h": 0.0, "growth_tmp": 28.5, "optimum_tmp": 28.8, "optimum_ph": 6.11, "genome_size": 9263541.9, "gc_content": 62.08, "coding_genes": 8151.0, "rRNA16S_genes": 6.0, "tRNA_genes": 62.0, "gram_stain": 0.0, "sporulation": 0.0, 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