{
    "type": "genome",
    "identifier": "GCF_003002915.1",
    "organism": "Geodermatophilus tzadiensis",
    "title": "Geodermatophilus tzadiensis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE Joint Genome Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_003002915.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN05661072",
        "wgs_master": "PVTG00000000.1",
        "refseq_category": "reference genome",
        "taxid": "1137988",
        "species_taxid": "1137988",
        "organism_name": "Geodermatophilus tzadiensis",
        "infraspecific_name": "strain=DSM 45416",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2018/03/15",
        "asm_name": "ASM300291v1",
        "asm_submitter": "DOE Joint Genome Institute",
        "gbrs_paired_asm": "GCA_003002915.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/002/915/GCF_003002915.1_ASM300291v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4869823",
        "genome_size_ungapped": "4869523",
        "gc_percent": "75.500000",
        "replicon_count": "0",
        "scaffold_count": "36",
        "contig_count": "36",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_003002915.1-RS_2024_05_03",
        "annotation_date": "2024-05-03",
        "total_gene_count": "4610",
        "protein_coding_gene_count": "4510",
        "non_coding_gene_count": "60",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2018-03-15",
    "dateModified": "2018-03-15",
    "datePublished": "2018-03-15",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Geodermatophilus tzadiensis"
        ],
        "sample_taxid": [
            "1137988"
        ],
        "sample_host_organism": [
            "not applicable"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "missing"
        ],
        "sample_host_location_id": [],
        "data_size": "1.256 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
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        "Number of Sequences": "36",
        "Longest Sequences (bp)": "613265",
        "N50 (bp)": "201492",
        "Gap Ratio (%)": "0.006160",
        "GCcontent (%)": "75.4",
        "Number of CDSs": "4594",
        "Average Protein Length": "321.2",
        "Coding Ratio (%)": "90.9",
        "Number of rRNAs": "2",
        "Number of tRNAs": "58",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "status": "conclusive"
            },
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                "species_taxid": 1190417,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Geodermatophilus bullaregiensis",
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                "species_taxid": 1564160,
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            },
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                "species_taxid": 1137994,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Geodermatophilus normandii",
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                "species_taxid": 1137989,
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            },
            {
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            },
            {
                "organism_name": "Geodermatophilus amargosae",
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                "status": "below_threshold"
            },
            {
                "organism_name": "Geodermatophilus pulveris",
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                "accession": "GCA_900188375.1",
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                "species_taxid": 1564159,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.702,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
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                "mean_intra_species_ani": "N/A",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Geodermatophilaceae;g__Geodermatophilus",
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        ]
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    "_bac2feature": {
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        "tzadiensis"
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    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}