{ "type": "genome", "identifier": "GCF_003024655.1", "organism": "Enterocloster lavalensis", "title": "Enterocloster lavalensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Seoul National University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003024655.1", "bioproject": "PRJNA224116", "biosample": "SAMN08765506", "wgs_master": "PYII00000000.1", "refseq_category": "reference genome", "taxid": "460384", "species_taxid": "460384", "organism_name": "Enterocloster lavalensis", "infraspecific_name": "strain=KCTC 15153", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/03/28", "asm_name": "ASM302465v1", "asm_submitter": "Seoul National University", "gbrs_paired_asm": "GCA_003024655.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/024/655/GCF_003024655.1_ASM302465v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6495707", "genome_size_ungapped": "6495707", "gc_percent": "55.000000", "replicon_count": "0", "scaffold_count": "100", "contig_count": "100", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003024655.1-RS_2024_12_13", "annotation_date": "2024-12-13", "total_gene_count": "6038", "protein_coding_gene_count": "5845", "non_coding_gene_count": "102", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-03-28", "dateModified": "2018-03-28", "datePublished": "2018-03-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Enterocloster lavalensis" ], "sample_taxid": [ "460384" ], "sample_host_organism": [ "Homo sapiens" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea: Seoul" ], "sample_host_location_id": [], "data_size": "1.834 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 97.57, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "6495707", "Number of Sequences": "100", "Longest Sequences (bp)": "597908", "N50 (bp)": "204691", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "55.2", "Number of CDSs": "5957", "Average Protein Length": "321.4", "Coding Ratio (%)": "88.4", "Number of rRNAs": "4", "Number of tRNAs": "71", "Number of CRISPRs": "4" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Enterocloster asparagiformis", "strain": "strain=DSM 15981", "accession": "GCA_025149125.1", "taxid": 333367, "species_taxid": 333367, "relation_to_type": "type", "validated": true, "ani": 94.5208, 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2123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterocloster bolteae", "strain": "strain=ATCC BAA-613", "accession": "GCA_002959675.1", "taxid": 208479, "species_taxid": 208479, "relation_to_type": "type", "validated": true, "ani": 78.2493, "matched_fragments": 452, "total_fragments": 2123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Massilistercora timonensis", "strain": "strain=Marseille-P3756", "accession": "GCA_900312975.1", "taxid": 2086584, "species_taxid": 2086584, "relation_to_type": "type", "validated": true, "ani": 77.9744, "matched_fragments": 113, "total_fragments": 2123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Hungatella hathewayi", "strain": "strain=DSM 13479", "accession": "GCA_025149285.1", "taxid": 154046, "species_taxid": 154046, "relation_to_type": "suspected-type", "validated": true, "ani": 77.2731, "matched_fragments": 219, "total_fragments": 2123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Diplocloster agilis", "strain": "strain=ASD5720", "accession": "GCA_019042275.1", "taxid": 2850323, "species_taxid": 2850323, "relation_to_type": "type", "validated": true, "ani": 77.2315, "matched_fragments": 104, "total_fragments": 2123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qiania dongpingensis", "strain": "strain=NSJ-38", "accession": "GCA_014337195.1", "taxid": 2763669, "species_taxid": 2763669, "relation_to_type": "type", "validated": true, "ani": 77.2313, "matched_fragments": 72, "total_fragments": 2123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marvinbryantia formatexigens", "strain": "strain=DSM 14469", "accession": "GCA_025148285.1", "taxid": 168384, "species_taxid": 168384, "relation_to_type": "type", "validated": true, "ani": 76.6906, "matched_fragments": 96, "total_fragments": 2123, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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