{ "type": "genome", "identifier": "GCF_003034225.1", "organism": "Sphingomonas fennica", "title": "Sphingomonas fennica", "description": "na", "data type": "Genome sequencing and assembly", "organization": "China Agricultural University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_003034225.1", "bioproject": "PRJNA224116", "biosample": "SAMN08056112", "wgs_master": "PHHF00000000.1", "refseq_category": "reference genome", "taxid": "114404", "species_taxid": "114404", "organism_name": "Sphingomonas fennica", "infraspecific_name": "strain=K101", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2018/04/04", "asm_name": "ASM303422v1", "asm_submitter": "China Agricultural University", "gbrs_paired_asm": "GCA_003034225.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/034/225/GCF_003034225.1_ASM303422v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4494276", "genome_size_ungapped": "4494276", "gc_percent": "67.000000", "replicon_count": "0", "scaffold_count": "89", "contig_count": "89", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_003034225.1-RS_2024_05_03", "annotation_date": "2024-05-03", "total_gene_count": "4456", "protein_coding_gene_count": "4340", "non_coding_gene_count": "52", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2018-04-04", "dateModified": "2018-04-04", "datePublished": "2018-04-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Sphingomonas fennica" ], "sample_taxid": [ "114404" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "not collected" ], 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"conclusive" }, { "organism_name": "Sphingomonas laterariae", "strain": "strain=LNB2", "accession": "GCA_900188165.1", "taxid": 861865, "species_taxid": 861865, "relation_to_type": "type", "validated": true, "ani": 84.0348, "matched_fragments": 831, "total_fragments": 1454, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas profundi", "strain": "strain=LMO-1", "accession": "GCA_009739515.1", "taxid": 2681549, "species_taxid": 2681549, "relation_to_type": "type", "validated": true, "ani": 80.7171, "matched_fragments": 617, "total_fragments": 1454, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas oleivorans", "strain": "strain=FW-11", "accession": "GCA_003050615.1", "taxid": 1735121, "species_taxid": 1735121, "relation_to_type": "type", "validated": true, "ani": 80.6231, "matched_fragments": 515, "total_fragments": 1454, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rhizorhabdus 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